Ahaetulla prasina (Asian vine snake): 131201950
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Entry
131201950 CDS
T09329
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131201950 (TNRC6B)
03036 Chromosome and associated proteins [BR:
apri03036
]
131201950 (TNRC6B)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131201950 (TNRC6B)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Gene silencing
piRNA pathway
131201950 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
131201950
NCBI-ProteinID:
XP_058046390
LinkDB
All DBs
Position
7:complement(66451795..66584698)
Genome browser
AA seq
1859 aa
AA seq
DB search
MQTDEGEILEEGSSKMEHEDFVMEGHGKTPPPGEENKQEKEQEKEEQLMEDKKRKKEDKK
KKETTQKVTDQKTKVPEATKTSLSQPVTASPIGSSPSPPINGGNNAKRVAVPNGQPPSAA
RYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGSGVGPTSSPAPGANPNNAQPVTGVL
LPCDSGTATDSTTGGAAASNYANSTWGPGVSSNSTNVNPTHVWDKVIVDGSDMEEWPCIA
SKDTESSSENSTDNNSASNSGSEKSTLLGSSSSNKGKGNQCQSGSSGNECNLGAWKSDPK
AKPVQSSSPSAESNGSLASWRNLSGQDRIGPNPGFSNFNPNSNPSAWPALIQEGNSRKGT
SETDNGGSNAQINTTGQTSREQQSKMENAGVNFVSGREHAQIHNTDGPKNGNAISLNLSS
PNPVENKGMSFEMGFGNPSRSTDTPSQSTGERKTGNVGSWGTARGPSGMDCASNQSNSGN
HGNNGKDREDLWKGASVQKSNGSRNESWDNNNRSTGDGSWTVGPQHSGESKWNEGNKMTS
GMSQGEWKQPSGSDELKIGEWNGPNQPNSSTGAWDNQRGHPLPENQGNSQAPCWGRSSSS
AGSEIGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWG
QTQIKQDTVWDIEEMSRAEGKSDKGTEGWESSAIQTKNSGGWGDAPSQSNPIKSGWGELS
TPTEWKEPKNTGGWNDYKSNCSNWGGGRPDEKVTTSWNEKSNKDPGWNGRPPNQGWSSGK
NGWGEEVDQTKNGNWETSGNKSISGWSEAGQNEIGTWGNNANSNSSSKAGWDNNKRTPAW
NDTGRQPNSWNNPQQHHQQSEAPSSWDPPPPPPPQPPGNGRLPNSNWNSGPQSTVSKDEE
PSGWEEPSPQSINRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQSGQASREQNHPPPRPS
KVTASVWNKSTPPAPDNGTAAWGEPNEASPGWGEVEEAGTSTTWGNGSSSASNAIKPNSK
SPQDGWGDNDGPVSGTRHSSWEEEEEGGVWNTAGSQGSNSSHNSTSWGQGGKKPQIKCSL
KGGSSDSWMNTLSDQISNMGLLNQTEDTSGNKMDLSVGGLQDKKFDVDKRGMNLGDFHDI
MRKNRSGFRPPSSKDMGNPDSGPYFEKLTLPFSNQDGCLGDEAPFSPSPNYKLSPSGSTL
PNVCLGAIGSGLNPQNFAARQGGNQGLFGNSTAQSRGMHPPVQPLNPSPNIRAQVPPQFL
SPQVSASMLKQFPNSGLNPGLFNMGPQLSPQQIAMLSQLPQFPQFQLACQLLLQQQQQQQ
QQQLLQNQRKISQAVRQQQEQQLARMVNALQQQQRQPGMKHSPSHPVGSKPHLDSIVSSG
LNVGLSDMSTKGQIPGYNSGFGSSSMDYGMVGGKETGTESRFKQWTSMMDGLPPVASQDA
SMHKNGTIVPPGKARGGSPYNQFDIVPGDPLGSHTGPAGDSWLPAKSPPTSKIGSKSSNA
SWPPEFQPGVPWKGIPNIDPESDPYVTPGSVLGGTITAPIVDTDHQLLRDNSTGSNSSLN
TSLPSPGAWPYSASDNSFTNVHSTSAKFNDYKSTWSPDPIGPNPAHLSTKLWKNHISSRN
TTGLPRPPPGLSNPKTSSPWSSTAPRSLRGWGAQDSRLASASTWSDGGSVRPSYWLVLHN
LTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTIL
AEFATDEEVSRFLAQAQPPTPAATPSAPTAGWQSLEAGQNQTDPVGPALNLFGGSTGLGQ
WSNSGGGSSGGDLAGASLWGPPNYSSSLWGVQSVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgatgagggagaaattttggaagaaggcagttccaagatggaacatgaggat
tttgtaatggaagggcatggcaagactccacctcctggtgaagaaaacaaacaagagaag
gagcaagaaaaggaagaacagttaatggaagacaagaaaagaaaaaaagaagataagaaa
aagaaggaaactactcagaaggtcacagatcaaaaaaccaaagtgcccgaagcgacaaaa
acaagtttaagccaaccagtgaccgccagcccaattggcagctctccatcgccacctata
aatggtggcaataatgccaaaagggtggcagtgccgaatggtcaaccgccaagcgctgcc
cgctacatgcctcgggaggtgccaccgcgatttcgttgccagcaggaccacaaagtgtta
ttgaaacgtgggcagccccctccgccatcttgtatgctccttggaagtggagtagggcct
acttcctctccagcacctggagcaaatccaaacaacgcacaaccagtaacaggagtgcta
ctgccatgtgacagtgggactgcaaccgattcaacaactggaggtgctgctgcttcaaat
tatgcaaattccacttggggtcctggagtgtcctccaacagcaccaatgtcaaccctact
cacgtctgggacaaggtgattgtagacgggtctgacatggaagagtggccttgtattgct
agcaaagatactgagtcttcttccgaaaactccacagacaacaacagtgcctcaaactcc
ggctcagagaagagcactctgctgggaagcagcagtagcaacaaaggaaaaggaaaccag
tgccagtctggaagctctggtaatgaatgtaatcttggggcttggaaatccgaccctaag
gctaaacctgttcaatcttccagtccttcagcagagagtaatggtagtctagcaagctgg
agaaacttgagtgggcaggatagaattggccccaatcctggcttcagcaactttaaccca
aatagcaacccatctgcttggccagcactaattcaggagggcaattcaaggaaagggact
tcagaaactgataatggtggttcaaatgcacagattaatacaacaggtcagacttctagg
gaacagcagtcaaagatggaaaatgcgggtgttaattttgtctctggcagagaacatgct
caaatccacaacactgatggaccaaaaaatggaaatgctatatccttgaacttaagttca
ccaaacccagtagagaataagggaatgtcttttgaaatgggctttgggaacccctccagg
agcactgataccccttcacaaagcactggagagagaaaaactgggaatgttgggtcttgg
ggtacagctagggggccttctggaatggactgtgcttctaatcaaagtaattctggaaat
catgggaacaatgggaaggatagggaagacttatggaagggagcttctgttcaaaaatca
aatgggtcaagaaatgaatcttgggataataataatagatctacgggtgatgggtcttgg
accgttggccctcaacactctggtgaaagtaaatggaatgaagggaacaaaatgacatca
gggatgtctcagggagaatggaaacagccgtctgggtctgatgaactgaagattggtgaa
tggaatggtccaaaccaaccaaattctagcactggagcatgggacaatcaaaggggccac
ccgcttcctgaaaaccaaggtaattcccaggctccctgttggggacgatcttctagttct
gcaggaagtgagattggaggtcaaagcactggaagcaaccataaagcaggaagtagtgat
agtcacaattctggacgccgatcatacaggcctacacatcctgattgtcaggcggttttg
caaactttattaagcaggactgatttagacccccgagtgctttcaaataccggttggggt
caaactcaaatcaagcaagatactgtttgggacatagaagagatgtcaagagctgaagga
aagtctgataaaggtactgaggggtgggagagttctgccatacagacaaagaactcaggg
ggctggggagatgcacccagccaaagcaatccaatcaagtctggatggggtgagctttca
actccaacagaatggaaagagcccaaaaacactggaggatggaatgattacaagagcaat
tgttctaactggggagggggaagaccagatgaaaaagtcacaacatcttggaatgagaag
tccaacaaagatccaggatggaatgggcgaccacctaatcagggatggtcttctgggaag
aatggctggggagaagaagttgaccaaacaaaaaatggcaattgggaaacttcaggaaac
aaatcaatatcaggttggagtgaagctggccagaatgagattggtacttggggtaataat
gcaaattcaaactcttcttctaaagcagggtgggataataataaaagaactccagcatgg
aatgatactggtagacaacccaattcctggaataatccacaacagcaccatcagcagtca
gaggcacccagttcctgggacccaccaccacctccaccaccacagcctccaggtaatgga
aggctacccaattctaactggaacagtgggccacaatcaactgtctcaaaggatgaagaa
cccagtggctgggaagaaccatccccccagtcaattaatcgtaaaatggatattgatgat
ggcacctcagcatggggagaccccaatagttacaactataagaatgtgaatctgtgggac
aagaactcacaaagtggacaagcttcacgagaacagaaccaccctcctccaaggccaagc
aaagtaacagcctcagtctggaacaaaagcacacctcctgcaccagataatggtaccgct
gcttggggtgaaccaaatgaagccagtcctggttggggtgaagtagaggaagcagggact
tctaccacgtggggaaatggatcctccagtgcatcaaatgccataaaacctaattccaaa
tcacctcaagatggctggggcgataatgatgggccagtatcaggaacacggcattccagc
tgggaagaggaagaggagggaggagtctggaacacagcaggctctcagggaagtaattcc
tcccataattcaaccagctggggacaaggaggaaagaaaccacaaatcaagtgttcattg
aaaggaggaagtagtgattcatggatgaataccttatctgatcagatttcaaatatggga
ttgttgaatcaaactgaagatacttcaggcaataagatggacttatcagtaggtggtcta
caagataagaagtttgatgtagacaaacgaggcatgaatctcggagactttcatgacata
atgagaaagaatcgatctggttttcgtcctcctagctccaaagatatgggaaacccagat
agtgggccttactttgaaaagctgactttgcctttctccaatcaagatgggtgccttggg
gatgaggctcccttctccccttctcccaactacaagctatctccctctggttccacatta
ccaaacgtctgccttggggcaatcggctcagggctcaacccccaaaacttcgctgctaga
caaggtggcaatcaaggtctgtttggaaatagcacagcacaatcgagagggatgcaccca
ccagtgcaaccgctaaacccttcccccaatattcgggcacaagtgcctcctcaatttctt
tccccccaggtttctgcatccatgcttaagcaatttcctaacagtggtctgaatccaggc
cttttcaatatggggccccaactttctcctcaacaaattgctatgttgagccaacttcca
cagtttcctcagtttcagcttgcctgtcaactgctcctccagcagcagcagcaacagcag
cagcaacaactattacaaaatcagagaaagatttctcaagctgtacgacaacaacaggaa
caacagcttgcccgtatggtaaatgcccttcaacagcagcaaagacagccaggcatgaaa
cattctccatcccacccagttggatctaagcctcatttagacagtattgtatctagtggt
ctaaatgtgggtctctcagatatgtcaaccaaagggcagattcctggatataattcaggt
tttggttcaagtagcatggattatggcatggtaggagggaaagaaactggaacagaatct
cgctttaaacagtggacttctatgatggatggcttgccacctgtagcttcccaagatgcc
agtatgcacaaaaatgggacaattgtgccccctggaaaagcccgagggggatctccctat
aaccaatttgatatagttcctggcgacccactgggcagccatacaggtcctgctggtgat
agttggctaccagccaaatccccaccaaccagtaaaattggaagcaaatccagcaatgcc
agctggccaccagaatttcagccaggagtgccgtggaaaggtattccaaatattgatcct
gaatctgacccttatgtgaccccaggaagtgtgctgggaggtacaatcacagcccccatt
gtagatacggatcaccaacttctgcgggataacagcacagggtctaattcttccctcaac
acctcgctgccttcacctggtgcctggccctacagtgcctctgacaattctttcacaaat
gttcatagcacttcagcaaaattcaatgattacaaatcaacatggtccccagatcccata
ggacctaatcccgctcatctctctaccaagttatggaaaaaccatatttcctcaagaaac
actacagggctgccacgcccacctcctggtctgagtaatccaaaaacatcctctccttgg
agcagcacagcgccccgctcgctcagggggtggggtgcgcaggattcaaggcttgcctct
gcctctacttggagtgatggtggttctgtacgtcccagctactggctggttcttcacaat
ctcactccacagattgatgggtcaactttaaggaccatctgcatgcagcatggtccattg
ctgacattccatctcaacctgacccaaggcaccgcccttatccggtacagcaccaagcag
gaggcagctaaggcccagactgcactgcacatgtgtgttttgggaaacactaccatcctg
gctgaatttgcaacagacgaggaagttagtcgctttctggcacaagctcagcctcctact
cctgcagcaactcctagtgcacccacagcaggctggcagtctcttgaggcaggacagaat
cagacagatccagttggacctgctttgaatctttttggtgggtcaacagggcttgggcag
tggagcaacagtggtggtggcagcagtgggggtgaccttgctggtgcttcattatggggg
cctccaaattattcttcaagtttatggggggttcaaagtgtagaagatccccacagaatg
ggaagccctgctcccttactacctggagaccttctaggcggagggtcggattcaatctga
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integrated database retrieval system
