Entry |
|
Symbol |
LIMCH1
|
Name |
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
|
KO |
K24422 | LIM and calponin homology domains-containing protein 1 |
|
Organism |
apri Ahaetulla prasina (Asian vine snake)
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Brite |
KEGG Orthology (KO) [BR:apri00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:apri04990]
131202874 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:apri04990]
LIM domain-containing proteins
Other lim domain-containing proteins
131202874 (LIMCH1)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
8:89367733..89587866
|
AA seq |
1643 aa
MPERQPGLQGAAAAAPALLGSPDSASAAADAGGGGGGGGAISARSSCSAAWDALRMASPA
LAQQPPPQPQPQPALAEARRWIEQVTGKTFGDKHFRSGLENGVLLCELLNSILPGSVTKI
NRSSTPIAGLDNIALFLRGCREVGLKESQLFDPGDLQETTGRTTTKNLDGSRKLKNVLVT
IYWLGKTANNSAHFNGPPLNLKEFEGLLTQMRKDTEDVESPKRSIRDSGYVDCWDSERSD
SLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSESDLPHRKLPDVKKDD
MSARRTSYSEPKSVVPFNQYLPNKSNQTAYIPAPLRKKKAEREDFRKSWSTMSSPLGGER
PFSKQHPETIEEEPLVPLDGDLASSRMTSSCPSAKPMRTDMGPKNPWPQFLTCSENQTIA
PQNEEKGPEEIGKLRRLEQAGIKVRPAAQRCGGSPKPASQGDELTPDIVLHQENPFMWWR
PQNDTGSEEDEDGRIPDLEKDDFAVRRARLNRREAALPFTHFFLPPSAKKDRNRREERKI
HTKNQERPSGKKILVTSAKPEMPGEDQPSWQDEGKAQIPDIQSHGLAKKPTHARPSQAAF
LSCGKASITPKDKEIWDRLKVSGETSEISLPDSDGCKSSVRDVCADAQQQRSSSLSEWQE
NSEEESDDRFPDLERDDMMVRRFGTFPKPINPLIPANRLATCNAPLKRQGNVVGQREPKL
QPKAEKPERNLSRLCAAQPGHGAPSFLISKDRKEQKNATESEKVAFQNPEKEDPTLRSSE
ALSRQAESSVFQLVPVCFSKQNKREEKFLRPEQQLKSVLVTVSVGAEQFCGELSQSHATQ
PAYTPEHKRRSAAGLAQEDVRSVVDQKISGARVIPPERPKHLEINSKQLATVEAGPLQIS
GCRTPVSDDTESVSMFDMRCPDEGAVNQPHSKDRHEKLQIVHHQLKEDEDQWQDDLARWK
NRRRSASQDLLKKEAERKKMEQLLIGGEGSNERRKSIKTYREIVEEKEKRERELHEAYKN
ARSQEEADRILQHYIERFTISEAVLERLEMPKLLERSHSVEPNSSSPSKDPNPLRYLRQQ
SLPPPKFTAKFEATIIPTNGSEASTSTGSPTSSRPSGSMAMPLVTPKPYSQPRETREILR
NFKVDGKISVNGEASNGVDDEPDKDCSAFLFEPSPTLSTKSDHVVKSHGGSTEGSTNSTT
PEPVQKSLIEHAVHREKVDSFTEEVDTACRKDRTELKEKFLVDPDLMEPSVTFSCANLLA
ADVEISSFHNHSNETESHPELNSTQEAKALERGEEKEKDASVSQKVQIDTSQAPKPGEDL
PISLLKKLPETNHGVLLETPLQDQKAAAENRDASNRSTCWSWDPEEERRRQERWQQEQER
LLQEKYQKEQEKLKKEWEKAQKEVEEEERKYYEEERKILEDTVVPFMLASGSTEPLSTSS
SLTDGNRTMNLIDLSYSEDDKKPNEEAKLKSLFYEQDGANYKECQPREENTSTVNKEEYP
EGLNWRQKEQVPTPGDKSPKDMALPLRPEVLWNQPLPADRSPGISDIRQKDSPVGYNLGQ
PASSPKEVKRAASQGSSGTGPSSPRSPTVQSQSSNRSISGKKLCSSCGLPLGKGAAMIIE
SLGLYFHIQCFRVGVSRPGGGLD |
NT seq |
4932 nt +upstreamnt +downstreamnt
atgcccgaaaggcagccggggctgcaaggggccgccgccgccgctcctgcgttgctcggc
tctcccgactcagcctcagccgccgccgacgcaggaggaggaggaggaggcggcggggcc
atctccgcccgctcctcctgctccgccgcttgggacgctctgcggatggccagcccggct
ctggcacagcagccgccgccgcagccccaacctcagcccgccctggccgaagcccggcgc
tggatcgagcaagtcactggaaaaactttcggcgataaacattttcgatcaggactagaa
aatggcgtgctgctgtgcgagttgttgaattccatattgcccggatcggtcacaaagatc
aacagatcgtccactcccattgcaggactggacaacattgccttgttcttaagaggttgt
agggaagtgggcctgaaagaatctcagctgtttgacccaggagacctgcaggagaccaca
ggccgaacaacaaccaagaatcttgatggtagcagaaagctgaaaaacgttttagtcacc
atctattggctggggaaaactgcaaacaacagcgctcactttaacggaccgccactgaat
ctgaaagaattcgaaggattgttaacccagatgagaaaggacacggaagacgtcgagagt
ccaaagcgcagcatccgcgacagcggctacgtagattgctgggattcggagcgtagcgat
tctctctccccgccgcgtcacggccgagatgattccttcgacagtctggattccttcggg
tcccggtcccagcagaccccttctccagatgtggtgctgagagggagcagcgatggaaga
ggaagcgattcggagtctgacctgccgcatcggaagctgccagacgtgaagaaggatgac
atgtctgccaggcggacatcttacagcgaacccaaatcagtcgtgcctttcaaccagtac
cttcccaataaaagtaaccagactgcctatatcccggcgccactcaggaagaagaaagcc
gaacgagaggacttccggaagagttggagcacgatgagctctccgctaggaggagagaga
cctttcagcaaacagcatcctgaaaccatagaagaagaacccctggtgccacttgatggg
gatcttgcgagcagcaggatgacctcttcctgcccctcggcgaagcctatgcggacagac
atgggtccaaagaacccttggcctcagtttctcacctgttctgagaaccaaacaattgcg
ccccaaaacgaggaaaaaggtccagaggaaatcgggaagctgagaaggttggaacaggct
ggtattaaggtcaggccagcagctcagcgctgtggcggcagtccgaaacctgcaagtcaa
ggggacgaactcaccccggacatcgtcctccaccaggaaaacccttttatgtggtggcgt
ccgcaaaacgatacgggctctgaagaggacgaagacggtagaattcccgacctagagaaa
gacgattttgccgtgcggagagcgaggctcaaccgccgcgaagctgccttgccatttact
cacttcttcctccctccttccgccaagaaagatcggaatcgaagggaagaaagaaagata
cacacaaaaaatcaggaacgtcccagtgggaaaaagatactcgtgacttcggccaagcca
gagatgccgggggaagaccaaccatcctggcaggacgaaggcaaagcacaaattcctgac
atacagagtcatggcctggctaagaaaccaacccacgctagaccttctcaagcagccttt
ctgagttgcgggaaagcgtctatcaccccgaaagataaagagatctgggatcgactgaag
gtttcaggggaaacgagcgaaatatcattgcccgattcagatgggtgtaagtcatcagtc
cgggatgtttgcgctgatgcccagcagcaacggtccagcagtctgagtgagtggcaagaa
aatagtgaagaagagtcagatgaccggttcccagatcttgaaagagatgatatgatggtt
agaagattcgggacttttccgaaaccgattaatcctcttatcccggctaaccgtttagcg
acttgtaatgctccattgaagcgccaaggaaatgtggttggtcagagagagccaaaactt
cagccaaaagcagaaaaaccagaaagaaatctctcgcggctttgcgcggcccaacctggt
catggagcgccttcgtttctaatatcgaaagatcgcaaggagcagaaaaacgctacggag
agtgagaaggtggcatttcagaatccggagaaagaggatccgacgctgagaagcagcgaa
gctctttcaaggcaggctgaatcaagcgtatttcagttagttcctgtttgtttctccaag
caaaacaagagggaggaaaagtttctaaggcctgaacagcaactgaagagcgtcctcgtg
acagtttcagtgggagccgagcagttttgtggggagctgtctcaaagccacgcaacgcag
cccgcgtacacaccggaacacaagagacgtagcgcggcagggttagcacaagaggacgtg
cgttctgttgttgaccagaaaatatcgggggcccgtgtaatcccaccagagaggccgaaa
catctggaaataaatagcaagcaacttgccaccgtagaagctggccctttgcaaatatcc
ggctgcagaacccctgtgtctgatgatacagagagcgtgagcatgttcgacatgaggtgc
ccagacgagggcgccgtgaatcaacctcacagtaaagatcgccatgagaaacttcagatc
gttcaccaccagctgaaggaagacgaggatcaatggcaagatgatttagcccggtggaaa
aaccgtcggaggagcgcttctcaggatttgttgaaaaaagaagccgagaggaaaaagatg
gagcagttactcattggaggagagggaagcaacgagagacggaagagcatcaagacgtac
cgagagattgtggaggagaaagagaagcgtgagagagaacttcacgaagcctacaagaat
gccaggtctcaggaagaggcagataggatactccaacattacatcgagaggttcaccatt
agcgaagcggtcctcgaacgcttggagatgccaaaacttttggaaagaagccattctgtt
gagccaaattcatcctccccatccaaggaccccaaccccctccgatatttacggcagcag
tcgctcccgcccccaaaattcactgccaagtttgaagccaccatcatccccaccaatggc
tctgaggccagcacatccaccggctcccccacctcaagcagaccctcaggctccatggct
atgcctctggtgacgcccaagccttactcccagccaagagagacccgggagattttgaga
aacttcaaggtggatggaaagatctccgtgaacggagaagcgagcaacggcgtggacgac
gaaccagacaaggactgctcagcctttctctttgaaccttcccccaccctttccaccaag
tctgaccacgtggtcaaatcacacgggggatccacggaagggagcacaaattccaccact
cctgagccggttcagaagagtttaatcgaacatgctgtacacagagagaaagttgactcc
ttcacggaagaagttgacacagcctgccgaaaagatagaactgaattgaaagaaaagttt
ctggtagatccagacctcatggaacccagcgtgacgttttcctgtgccaacctcctggcg
gccgacgtggagatatcttccttccacaatcattccaacgaaacggagtcacatcctgag
ctgaattcaactcaggaggcgaaagcccttgaaagaggagaagagaaggagaaagacgct
tcggttagccagaaggtccagatagatacctcgcaggctccgaaaccaggtgaagaccta
cctatttctcttctgaagaagctcccggagacaaaccacggggttttgctggaaactccc
ctacaagatcagaaagccgccgccgagaaccgcgacgcatcaaaccgttcgacttgttgg
tcttgggatccggaggaggaacggaggcgccaagaacggtggcagcaggaacaggaacgt
ctacttcaggaaaagtatcagaaagagcaggagaagttgaaaaaagagtgggaaaaggct
cagaaggaagttgaagaagaggaacgcaaatattacgaagaggaacgcaagatccttgaa
gatactgtggttccattcatgttggcttcaggctctacagaacccttgtctacgtcgtct
tctctgaccgatggcaacaggactatgaatttgattgatctaagttactcggaagacgat
aagaaaccaaacgaagaggccaaactgaagtcgttattctatgaacaagatggcgcaaat
tataaggaatgccaaccacgagaggaaaacacgagcaccgtgaataaggaagaatatcct
gaaggcctgaattggagacagaaagagcaagttcccaccccaggagacaaatcacccaag
gacatggctttgccgttacgtccagaagtcctgtggaaccagccactaccagcagaccgg
agccctggcatttcagacatcagacagaaagattcacccgtgggatataatttaggccag
ccggccagttccccaaaagaagttaagagggcagcttcccaaggcagctccggaactggg
ccatcgtcaccacgttctcccaccgtccaaagccaatcgtctaacaggtccatcagtggg
aagaaactctgctccagctgtggactccccctcggaaaaggagccgccatgattattgaa
agcctcggtctttatttccatattcagtgcttcagggtaggtgtctctcgaccagggggc
gggttggactag |