Ahaetulla prasina (Asian vine snake): 131202908
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Entry
131202908 CDS
T09329
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131202908 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apri03021
]
131202908 (SMARCA5)
03036 Chromosome and associated proteins [BR:
apri03036
]
131202908 (SMARCA5)
Transcription machinery [BR:
apri03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
131202908 (SMARCA5)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
131202908 (SMARCA5)
RSF complex
131202908 (SMARCA5)
WICH complex
131202908 (SMARCA5)
B-WICH complex
131202908 (SMARCA5)
NORC complex
131202908 (SMARCA5)
BRF complex
131202908 (SMARCA5)
NuRF complex (fruit fly)
131202908 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
131202908
NCBI-ProteinID:
XP_058048490
LinkDB
All DBs
Position
8:complement(36076455..36105740)
Genome browser
AA seq
1040 aa
AA seq
DB search
MMSALGPENENVSSLSGTASVPSGMENTGGAPGSSEGTAGINDEGTELVGDESPGKQKEN
QEPDPTYEEKMQTDRANRFDYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ
NLLSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLIS
LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVP
TLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRI
KNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNN
CLGDQKLVERLHMVLRPFLLRRIKAEVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID
ILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLP
KLKEQGSRVLVFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKF
LFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV
EERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDED
IDGILERGAKKTAEMNEKLSKMGESSLRNFTVDTESSVYNFEGEDYREKQKMAFTEWIEP
PKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYR
KTIGYKVPRNPDLPNAAQTQKEEQIKIDEAEPLNEEELDEKEKLLTQGFTNWNKRDFNQF
IKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQR
RISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDEL
RQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSLT
QKRKLDGTPDGRGRKKKLKL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgcgctgggaccggagaacgagaacgtgagctccctttcgggcaccgcttcg
gttcccagtggcatggagaacacaggaggggccccgggttcttccgaagggacggccggg
ataaacgacgaaggaacggaacttgttggtgatgaatctcctggaaaacaaaaagaaaat
caagaaccagatcctacatatgaagaaaaaatgcaaaccgatcgagcaaacagatttgac
tatctgttgaaacagacagaattgtttgcacatttcattcagcctgctgctcagaagact
ccaacttcccccttaaaaatgaaaccaggacgaccaagaataaaaaaagatgaaaaacaa
aatctgttatctgttggagactatcgccatcgtagaactgaacaggaagaggatgaggag
cttttaacagaaagttccaagactactaatgtatgcacgcgatttgaagaatctccatcc
tatgtgaaatggggaaaattacgtgattatcaagtcagaggattgaactggctcatttct
ttgtatgaaaatggcatcaatggtattttagcagatgaaatgggtcttggaaagacattg
caaacaatttctcttcttgggtacatgaaacattacaggaacattccagggcctcatatg
gtattggttcccaaatcaactttgcataattggatgaatgaattcaagagatgggtgcca
actctacgagcagtatgtttgataggtgataaagaccagcgagctgcttttgtgagagat
gttttgctgccaggagaatgggatgtctgtgtaacatcatatgaaatgctcattaaagag
aaatcagtattcaaaaaatttaactggagatacctagttattgatgaagcccacaggatt
aaaaatgaaaagtcgaagttgtcagaaattgtgagggaattcaagactacaaataggtta
ttgttaactggaacaccattacagaacaacttacatgaactatgggcacttcttaacttt
ttattgccagatgtctttaattcagctgaggattttgattcctggtttgatacaaacaac
tgtcttggggatcaaaaattagtagaacggcttcacatggtactacgaccatttttgtta
cgtcgtataaaagctgaagtagagaaaagtttacctcccaaaaaagaagttaaaatatat
gttggtctcagcaaaatgcaaagggaatggtacacaagaatcttaatgaaggatatagat
atattgaactctgctggaaaactggataaaatgagactattaaacatccttatgcagtta
cgaaaatgttgcaatcatccgtacctttttgatggagcagagcctggccccccttataca
acagatatgcatttggttaccaatagtggcaaaatggtagttttggataaattgttgcca
aaattgaaagaacagggatcacgagtcctagtcttcagccagatgacaagagtcttagat
atattagaagattactgtatgtggcgaaattatgagtattgcagacttgatgggcagaca
cctcatgatgaaagacaagcttctattaatgcatacaacgaacctggcagttcaaagttt
ctctttatgctgagcacacgggctggtggtttgggaatcaacctagctacagctgatgtt
gtaattctatatgattctgactggaatccacaagttgatcttcaggctatggatcgtgca
catagaattggtcagacaaagactgttagagtattcagatttattacagacaacactgta
gaagaaagaatagtagaaagagcagaaatgaaacttcgcttagattccatagttattcaa
caaggaagactagtagatcagaatctgaataaactgggaaaagatgaaatgttgcaaatg
attcgacatggagctacccatgtctttgcatcaaaagagagtgaaattacagatgaagac
attgatggtattttggaaagaggcgcaaagaaaactgcagaaatgaatgaaaaactttcc
aaaatgggtgaaagttcactcagaaactttacagtggatacggaatctagtgtgtataac
tttgaaggagaagattacagagaaaaacaaaagatggcattcacagagtggatcgagcca
cctaaacgggaaagaaaagccaactatgcagttgatgcttattttagggaagctcttcgt
gtcagtgaaccaaaagcaccaaaggccccacgacctccaaaacaacctaatgttcaggat
ttccaattctttccaccacgtttgtttgaattgttggaaaaagaaattctttattataga
aaaactattggatataaggtacctcgtaatcctgacttgccaaatgcagctcagacacaa
aaggaagaacaaattaaaattgatgaagctgaaccgcttaatgaagaagaactagatgaa
aaggaaaaactacttactcagggatttacaaactggaataaaagagatttcaatcagttc
attaaagctaatgaaaaatggggtcgtgatgacattgaaaatatagctcgagaagtagaa
ggaaaaactccagaggaagtcattgaatattctgctgttttctgggaacgatgtaatgag
cttcaggacatagaaaagattatggcgcaaattgaaagaggtgaagctcgaattcagagg
agaattagtattaaaaaagcacttgacacaaagattggcagatacaaagcaccttttcac
caattgagaatatcatatggtactaacaaagggaagaattacacagaagaagaagatcgg
tttttgatctgtatgcttcataagcttggatttgacaaagaaaatgtttatgatgaattg
agacagtgtattcgaaattctccccagttcagatttgactggttcctcaagtctagaact
gcaatggaattgcaacgaagatgtaataccttaataactttgattgaaagagaaaacatg
gaattagaagaaaaagagaaggcagaaaagaagaaacgtggacctaaaccatctttgaca
cagaaacgtaaattggatggtactcctgatggaagaggaagaaaaaagaaactcaagctg
tga
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