Ahaetulla prasina (Asian vine snake): 131202916
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Entry
131202916 CDS
T09329
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03030
DNA replication
apri03410
Base excision repair
apri03420
Nucleotide excision repair
apri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131202916 (RFC1)
03410 Base excision repair
131202916 (RFC1)
03420 Nucleotide excision repair
131202916 (RFC1)
03430 Mismatch repair
131202916 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apri03032
]
131202916 (RFC1)
03400 DNA repair and recombination proteins [BR:
apri03400
]
131202916 (RFC1)
DNA replication proteins [BR:
apri03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131202916 (RFC1)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131202916 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
PTCB-BRCT
AAA_14
BRCT_2
AAA_30
RuvB_N
Rad17
AAA_19
AAA_5
Zeta_toxin
TIP49
AAA_17
AAA_33
nSTAND3
AAA_16
AAA_18
SKI
NPHP3_N
AAA_7
NTPase_1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
131202916
NCBI-ProteinID:
XP_058048523
LinkDB
All DBs
Position
8:complement(88456671..88507364)
Genome browser
AA seq
1142 aa
AA seq
DB search
MDIRKFFGVVTPGKKPECGIARKEKPQNKEKNSGATSTLKEIKVKSSPHEEDFKQKPANK
KKRIIYDSDSEEEVPLIKKSKQPERKLSAKSAKLLKTDPVAYVSETDEDEDFVNKKAPPK
VKQLEKSGKGTQETTGTSQPDSKPKVKNKPLSPVKLTPTSLIDYFGTGSIQRSEKKLVSS
KRKEPWQSRESTINDEAIAKELQLEENSKRERQLHEDEEFAQTLAMLDETPRKKKPRKDE
FQQSKSGEAEKNKQAHKGKLPASAFDSQAYSTKDQIRSESVRVSNPRPESSATKEEVDWG
NKRGSSKTSTRSTPLKQQAEAIKTENGTSKGENLRKGTVTPAGKTISPKTKTPTKVKVSP
EQPKSISPEDSAEKKRTNYTAYRSFLNREGPKALGSKEIPQGGENCLEGMTFVITGILES
IERDEAKSLIERYGGKVTGNISKKTNYLVKGRDCGMSKCDKASALGTKIIDEDGLFDLIR
NTPGRRSKYEIAAETEAKRTKPKVEKTSPETKAHKRKPSPAKPDSDSQKKTLIAENTEPF
KSIKQEAGAVRRGLDFLEEEEEEGKKQVPKEKKSSVHETNQKGGEVLLWVDKYKPTSLKT
IIGQQGEQSCANKLLRWLKNWQKNSSEDKQVKSGKSGIKDDGANSKAALLSGPPGVGKTT
TASLVCQELGVSYVELNASDTRSKKSLKEVVAESLNNTSIKGFCSGESRSVSAKHVLIMD
EVDGMAGNEDRGGIQELIDLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFPRPRVEQI
KGAMMSIAFKEGLKVPPPAMNELILAANQDIRQVLHNLSMWCARDKTLTYDGVKEDASKA
KKDIKLGPFDVVRKVFAKGEETSHMSLIDKADLFFHDYSLGPLFVQENYIHVKPAAAGND
LKKELILLSKTADSICDGDLVDRQIRSRQNWSLLPTQAIYSSVLPGELMRGYLQEFPSFP
SWLGKFSSTGKHDRIVQELSMHMSLRTHAGKRDVNLDYLSYLRDAVARPLASQGSEGVQD
AVAFMDSYCLLKEDVENLMEVTCWAGKPSVFSKLDPKVKSAFTRAYNKVAHLTPYSLQIA
PKSKRVGSVDADGSEELESNDAETEEGSLESDAMIKKKTKPAKPPKAERKEERKKGKSKK
KS
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggatatccgtaaattctttggagttgtaactccaggaaagaaacctgaatgtggcatt
gcgagaaaggaaaaaccccagaataaagagaagaattcaggggcaacatcgacgctgaaa
gaaatcaaggtgaaaagttcacctcacgaagaggatttcaagcaaaaaccggcaaacaag
aaaaagaggataatctatgattcagattccgaagaggaggtaccattaatcaaaaaatct
aagcaaccagagagaaagttatctgcaaaatctgctaagctgttaaagacagatcctgtg
gcttacgtttcagaaacagatgaagatgaggacttcgttaacaaaaaagcccctccgaaa
gttaagcagcttgagaaatcggggaaggggactcaagaaacgacgggaacatcccagcca
gattccaaaccaaaagtcaaaaataaacccttatctcctgtgaaactgaccccgacctcc
ctcattgattactttgggactggtagcattcaacggtcggagaagaagctggtatcaagc
aaacgaaaagaaccgtggcaaagcagggagtccaccatcaatgatgaggctatcgctaaa
gaactacagctggaggaaaattcaaagcgggaaagacaattgcacgaagacgaggaattt
gcacaaacgttggctatgttggatgaaacgcccagaaagaaaaagcctcgaaaagacgaa
tttcagcagtcaaaatcgggcgaagcagaaaaaaataaacaggctcacaaagggaaactt
cccgcttccgccttcgattctcaagcttattccacaaaggatcagattcgctccgaaagt
gtcagggtgtccaatcctcgcccagaatcttctgctacgaaggaggaggtggattggggg
aataaaaggggttcgtccaagacttccaccaggtcaactccactcaagcaacaagcagag
gctatcaaaaccgaaaacgggacctcaaaaggagaaaacctccggaaaggaactgtaact
ccagcaggaaaaaccatttcgcccaaaactaagacaccgacaaaggtgaaggtttctccc
gaacaacccaagtccatcagtcccgaggactctgctgaaaagaagcggacaaattacacg
gcctaccgaagcttcctcaatcgagaaggcccgaaggccctcggctcgaaagaaataccc
caaggtggtgaaaattgcttggaaggcatgacgtttgtgattactggaatcttggaatcg
attgaacgggatgaagccaagtctctgattgagcgctacggggggaaagtcaccggaaac
atcagcaagaagaccaattaccttgttaaagggcgtgactgtggcatgtccaagtgtgac
aaggcatcggctttagggacgaaaattatcgatgaagatggcttgtttgacctgatacga
aatactccaggcaggagatccaagtatgaaatagcagctgaaacagaggccaagagaaca
aagcccaaggtcgaaaaaacgtccccggaaacgaaagcccacaaaaggaaaccaagtccc
gcaaagccggactccgactcccaaaagaaaaccctcattgcggaaaacacggagcctttt
aaatccatcaaacaggaagccggggcagtaaggagagggctggacttcctggaggaggag
gaggaggaggggaagaagcaagttcccaaggagaagaagagctccgttcacgaaactaat
cagaaaggaggggaagtgttattgtgggtggacaaatacaagcccacgtctctcaagacc
atcatcgggcaacaaggcgagcagagctgcgctaataaactcttgcgttggcttaaaaac
tggcagaagaattcttcggaagacaaacaggtcaaatccggtaagtctggaatcaaagat
gacggcgctaattccaaagcagctttgctttccgggcccccgggagtagggaaaacgacc
acagcatcattagtttgtcaggaactcggtgtgagttacgtggagttgaacgcgagtgac
actcgcagcaagaagagcctgaaagaggtggtggccgaatctctgaacaacaccagcatc
aaaggattctgctcaggggagtcacgttccgtcagcgcaaagcacgtcctcataatggat
gaggtggatgggatggctggcaatgaagacagaggtggcatacaggagctaattgacctt
ataaagcacaccaaaattccaataatttgcatgtgtaacgatcggaaccatcccaagatc
cgttctctggtccactattgttttgaccttcgttttccgaggccgagagtggagcagatc
aagggcgctatgatgtccattgctttcaaagaagggttaaaggttccaccaccggcaatg
aacgaactcattttggcggctaatcaggatatcagacaggtgttgcataatctcagcatg
tggtgtgcccgagacaaaaccttgacttacgacggtgtcaaagaagacgccagtaaagcc
aaaaaggatattaagctgggtccttttgacgtggtgaggaaggtcttcgccaagggagaa
gagacctctcacatgtcccttatagacaaggcagatctgttcttccacgattactctctg
gggcccctctttgtccaagaaaactacatccatgtcaagcccgccgccgctgggaacgac
ttgaagaaagaactcatcttacttagcaaaaccgcggacagcatttgcgatggcgattta
gttgaccgccagattcgcagtcgacagaactggagccttctgcccactcaggcaatctat
tcaagcgtcttgcctggggagctgatgagaggctatttgcaagaatttcccagttttcca
agttggttggggaaattttcatccaccggaaagcatgaccgcatcgtacaggagctttct
atgcatatgagtctcagaacgcacgcgggtaagagagacgtgaatctggactacctgtcc
tatctgcgcgatgcagtggcgagaccgttggccagccaaggctcggaaggagtccaggac
gctgtcgccttcatggattcttactgtttgttgaaggaagatgtcgaaaacctcatggag
gtcacctgctgggcagggaagcccagcgtgttttccaaattggatcccaaggttaaatcg
gcgttcacgcgcgcctacaataaagttgcacaccttacgccgtactccctgcaaattgcg
ccgaagtcgaaacgagtcggctcagtggatgcagacgggagtgaagaactggaatcgaac
gacgccgagactgaggaagggagcctggaaagcgatgcaatgattaagaaaaagaccaaa
cctgccaagccaccaaaagcagaaaggaaggaagaaaggaagaaaggaaaatcaaagaaa
aaaagctaa
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integrated database retrieval system
