Ahaetulla prasina (Asian vine snake): 131202961
Help
Entry
131202961 CDS
T09329
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131202961 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apri03041
]
131202961 (PRPF40A)
Spliceosome [BR:
apri03041
]
Complex A
U1 snRNP components
U1 related factors
131202961 (PRPF40A)
Complex B
131202961 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
131202961
NCBI-ProteinID:
XP_058048669
LinkDB
All DBs
Position
1:228411788..228450626
Genome browser
AA seq
1053 aa
AA seq
DB search
MSGGDSAAAAASPQPLPFSLPKPPPLMQLNPGEGVRPVGAPGPEQSPKSARMGGRPDWPA
GKPVSLLAPLLPPRGEPEPLLPFGPSSRQPLRGRLLGRGGGGGGGNSAGSGSLLNPGMRL
GAGGGGTGGGGGGGGGGGGMGRDAVMMGHPGMPHYPPMGMHPMGQRPPNMPPVSHGMMPQ
MMPPMGGPQMGQMPGMMQSVMPGMMAPHMSHGPMQPTGPPGVNSMDSQIGLAPPGTQPTP
PVCAVQQATPTNNSTNEEPSKQKSTWSEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQ
LLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSKSEESAPVSSSA
VAPGIPAAAANVPEIPVPVPSAPVAPAMASAPETEPSTVVPVTENDAGVTPSTDEQIQPA
APSIVQEQSMEVITNSVEETPKQESLDVVPKKEEEEAQPVKKTYTWNTKEEAKQAFKELL
KEKRVPSTASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARLKYKEAK
ESFQRFLENHEKMTSTTRYKKAEQMFGELEVWNAISERDRLEIYEDVLFFLSKKEKEQAK
QLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEH
IRALEKEEEEEKQKGLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDI
RFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVTTPFEDFVTVIS
STKRATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELD
AVWEDIRERFVKEPAFEDITLESERKRIFKDFIYLLEHECQHHHSKNKKHSKKSKKHHRK
RSRSRSGSESEDDDSHSKKKRQRSDSRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSD
SPESDADREREKKERENEKERSRQRSESKHKSPPKKRPNKDSHHPATNSVRLQETSEEAD
QIRGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggagactcggcggccgccgcggcctctcctcagccgttgcccttctcgctg
cccaagcctccccccctgatgcagctcaaccccggcgaaggcgtccgccctgtgggagct
cccggaccggaacagtcgccgaaaagcgcccgcatgggaggccggccggactggcctgcc
gggaagcccgtcagtcttctggcacctctccttccgccgcgcggggaacccgaaccgctc
cttcccttcgggccgtcctctcgccagcctctccgcgggaggctcctcggcaggggcggc
ggcggtggcggcggtaacagtgcgggcagcgggagcctcctcaaccctggtatgaggctg
ggcgccggcggaggaggaaccggcggcggtggtggcggtggtggcggcggcggcggtatg
ggccgagatgctgttatgatgggacatccaggcatgcctcactatccacccatgggaatg
catcctatgggccaaaggccccccaacatgcctccagtatctcatgggatgatgcctcaa
atgatgcctccaatgggaggaccacaaatgggacagatgcctggaatgatgcagtcagtg
atgcccggaatgatggcacctcatatgtctcatggccccatgcagccaacaggaccgcca
ggagtgaacagcatggattcgcaaattggtttagctccccctgggactcagcctacacct
ccagtttgtgcagtgcaacaagccactccaaccaataactctactaatgaagagccctca
aaacagaaatctacatggtcagagcataagtcaccagatgggaggacatactattacaat
actgagaccaaacagtctacctgggagaagccagatgatcttaaaacccctgcagagcaa
ttgttgtcaaaatgcccatggaaagaatacaaatctgattctggaaagccttattactac
aactctcaaacaaaggagtcacgttgggcaaaacccaaagaacttgaagatcttgaagca
atgattaaagcagaggaaaacagcaaatctgaagaatctgctccagtttcatcttctgcg
gttgcaccagggattccagctgctgccgccaatgttcctgaaataccagtacctgtacca
tcagcccctgttgctcctgccatggcctcagctccagaaacagagccttctactgtggtt
ccagttacagaaaatgatgcaggagtaactccttcgacagatgagcagatacagccagcg
gctccttctattgtacaagaacagagcatggaagttatcacaaactctgtggaagaaact
ccaaagcaagaatccttggatgttgtacccaaaaaggaagaagaggaagctcaaccggtt
aaaaaaacttatacttggaatacaaaagaagaagccaaacaagcatttaaagaattattg
aaagaaaagcgtgtgccatccactgcctcttgggaacaagctatgaaaatgatcattaat
gatccaagatacagcgctttggcaaaattgagtgagaagaagcaagcctttaatgcttac
aaagtccagacagagaaagaagaaaaagaggaagcaagattaaaatacaaagaagcaaaa
gagtcttttcagcgtttccttgaaaatcatgaaaaaatgacatcaacaaccagatacaaa
aaagctgaacaaatgtttggagagctggaagtctggaatgcaatttctgaacgtgatcgc
cttgaaatttatgaagatgttctattcttcctgtcaaaaaaagagaaggaacaagccaaa
cagctaaggaagaggaactgggaggcattaaaaaacattctggacaatatggctaatgtc
acttactctactacatggtcagaggctcagcagtatctgatggacaatcctacattcgca
gaagatgaagaacttcagaatatggataaagaggatgccttgatctgttttgaagaacac
ataagagcacttgaaaaagaggaagaagaggagaagcagaaaggcttactcagagaaagg
cgacgacagcgaaaaaacagagaatcttttcagatatttttggatgagttgcatgaacat
ggtcagctgcactcaatgtcgtcatggatggagttatatccaaccattagttctgatatt
aggtttactaatatgcttggtcaacctggttcaacagcactggatcttttcaagttttat
gttgaagatttaaaagctcgctaccatgatgaaaagaagataatcaaagatattttaaag
gataaaggatttgtagttgaagtgactactccttttgaagactttgtaacagtcatcagt
tccactaaaagagctaccacgttagatgctggaaatatcaaactggctttcaacagtctg
ttagaaaaagcagaagctcgtgaacgtgagagagagaaagaagaagctcgcaaaatgaaa
cgaaaagaatctgcttttaaaagcatgttaaaacaagcaacacctcccattgaattggat
gcagtctgggaagatattcgggagagatttgtaaaagagccagcatttgaagacatcact
ttagaatcagagagaaaaagaatatttaaggatttcatttatttactggagcatgagtgt
cagcatcatcattcaaagaacaagaagcactctaaaaaatcaaagaagcatcatagaaag
aggtctcgctctcgttcgggctcagaatccgaagatgacgatagccattcaaagaaaaag
aggcaacgttcagactcacgctcagtttctgaacgctcctccagtgcagaatctgagaga
agctacaagaagtcaaagaagcataaaaagaaaagcaaaaagaggagacacaagtctgat
tctccggaatcggatgcagatcgagaaagagagaaaaaagagagagaaaatgaaaaagaa
agaagtagacaaagatctgaatctaagcataaatcgccacctaagaagagacctaacaaa
gattctcaccatcctgcaaccaacagcgttcgattacaagaaacatcagaagaagcggat
cagattcggggtaattgggatacctctggtagtgaattaagtgaaggtgaacttgaaaaa
caaaggaggaccctcttggaacaactggatgaagatcaataa
DBGET
integrated database retrieval system
