Ahaetulla prasina (Asian vine snake): 131203020
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Entry
131203020 CDS
T09329
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131203020 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131203020 (CNOT6L)
Enzymes [BR:
apri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
131203020 (CNOT6L)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131203020 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131203020 (CNOT6L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
131203020
NCBI-ProteinID:
XP_058048819
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All DBs
Position
8:complement(10912754..10958257)
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AA seq
550 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRNLSPSLWSLTHLTALHLND
NYLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQNLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAVVLEVQKELFGAGMKPLHTMDSQLLIIANAHMHWDP
EYSDVKLVQTMMFVSELKSILEKASGRPGSPTADTNSIPMVLCADLNSLPDSGVVEYLSN
GIVADNHKDFKELRYNECLMNFSGNGKNGAPEGRITHGFQLKSAYENNLMPYTNYTFDFK
GVIDYIFYSNTHMNVLGVLGPLDPHWLVENNITGCPHPHIPSDHFSLLTQLELHPPFLPP
INGIHLPNRR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatatataccatcatgtcagca
gaagaggtagccaatgggaagaagtcccactgggcagagttggaaatctcgggtagagtg
cgcaatttaagtccatcactttggtcactaacacacttgactgctctccacctcaatgac
aactatttaactcgcattccacctgatattgccaagcttcataatctggtttacctggat
ctctcatccaacaaactccgaagtttaccagcagaactaggaaacatggtttctctcagg
gaattgcttttaaacaacaatttgttacgagttttgccttatgaacttggacggctcttc
cagctacaaaacctaggtctgaaaggcaatcctttatcacaagatattctcagcctctac
caggacccagatgggacacgtaaattgttgaactacatgcttgacaatctagcagttcat
ccagagcagctgcctccaaggccatggattacattaaaagagcgagaccaaattctgccc
tcagcttcgtttactgtcatgtgctacaatgtattgtgtgataaatacgctacccgtcag
ctctatggctactgtccctcctgggctttaaactgggaatacagaaaaaagggaatcatg
gaagaaattgtgaactgggatgcagatatcattagtcttcaggaagtagaaactgagcaa
tacttcaccctctttctgccagcattaaaagagcgtggatatgacggatttttttctcca
aagtcacgtgccaaaatcatgtctgagcaggagcgaaagcatgtggacggttgtgcaata
ttcttcaaaacagaaaagttcacactggtgcagaagcacacggtcgagttcaaccaagtg
gcgatggccaactcagaagggtccgaagctatgctgaaccgagttatgacaaaggacaac
atcggagttgcggttgtgttagaggtgcagaaggaactgttcggggcaggtatgaaacca
cttcatacaatggacagccagctgcttataatagcaaatgcccatatgcattgggaccct
gaatattcggacgtaaagcttgtccagacaatgatgtttgtctccgaacttaaaagtatc
cttgagaaagcctctggtcggcctggaagcccaacagcagacacaaattctattcctatg
gtgctgtgtgcagatctcaactcactgcctgattcaggtgttgtggaatacttaagcaat
ggaatagtggccgacaaccacaaagacttcaaggagctgcgttacaatgagtgtctcatg
aacttcagtggcaatggaaagaatggggctcctgaaggaagaatcacccatggtttccaa
ctcaagagcgcctatgaaaacaacttgatgccttatactaattacacttttgatttcaag
ggtgtaattgactatattttttattccaacactcacatgaatgtgcttggtgtcctgggg
cctttggatcctcactggctggttgagaacaacatcacagggtgcccccaccctcacatc
ccttccgaccacttctcactgttgactcagcttgagcttcaccctccgttcctgcctccc
atcaacggcatccatttgccaaacaggagatag
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