Ahaetulla prasina (Asian vine snake): 131203343
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Entry
131203343 CDS
T09329
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131203343 (HTT)
04131 Membrane trafficking [BR:
apri04131
]
131203343 (HTT)
03029 Mitochondrial biogenesis [BR:
apri03029
]
131203343 (HTT)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131203343 (HTT)
Membrane trafficking [BR:
apri04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
131203343 (HTT)
Mitochondrial biogenesis [BR:
apri03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
131203343 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
Rad26-like_helical_rpts
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
131203343
NCBI-ProteinID:
XP_058049429
LinkDB
All DBs
Position
8:90835756..90962167
Genome browser
AA seq
3100 aa
AA seq
DB search
MAAMEKLMRAFEALRSFQQQQLPPPPPPPPQPSPAAGPAPEEPPARPKKELSTSKKDRVN
HCLTICENIVAQSLRNSPEFPKLLGIAMELFLLCSDDAESDVRMVSDECLNKVIKALMDS
SLPRLQLELYKEIKKNGASRSLRAALWRFAELAHLVRPQKCRPYFVNLLPCLTRVSRRPE
ESVQETLAAAMPKIMAAFGNFANDSDIKVLLKAFIGNLNSNSPTIRRTAAAAAVSICQHS
RRTQYFYTRLLQVLLGLLCPKEEEHPSVLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVI
QKETEISPSLDQLIQVYELSLHYTQHRDHNVVTGSLELLQQLLRTPPPDLLLALTMRGGL
LQAAAAKDEIVSRSRSDSIVELIAGGGSSCSPVFARKQKDLPAKVLSGEESLEEDSEARS
QTSQVGFSGSGKSELNSELTSTSGVSPAASSASDPPGYDIITEQPRSQHVLQSESEISAC
DLTGATPKADTDDDMLSRSSSQISAIQSDVNDGTSSPISDSSQTTTEGPDSAVTPSDFSE
MILEGGENQYSGMQIGQLQEEEDETANVLHDETLDPFRNSCLELQRSHLAKSVSHRREPS
NSSMEKFGPKEETELADHGIKLSRMKGDIGGYKDGSAAPLVHCVRLLSASFLLTGEKGAL
VPDKDVRVSVKALAISCVGAAVALYPEAFFSRLYKMPTESNKEEGEEQSVKDIVNYIDHG
DPQIRGTTAILCGTIIYSILVQSCFSVESWLENIKASIGTLVECVSLLQKSLKDESSVTC
KLACIAVRHCIMSLCSSSHSSLGLQLLVDLLLLRNSSYWLVRTELLETVAEIDFRLIQFL
EERDSNQHRGDHHYTGLLKLQDRVLKEVVISLLGDEDPRVRRVAAAALVRLVPKLFYSCD
AGQADPVVALAKEQSSVYLKLLMHETPPTSHFAVSTITRTYRGYNLTPSPADLTVENNLS
RVISAVSHALTTSPSRSLTFGCCEALCLLSSSFPVCTWNVGWHCGFSHPGGVEESRDKSA
VGMVGFLLSLLSSVSFPLDLSAHQDALILAGNLLAATASKSLQNPWTHSEDEASIPAAKQ
EDSWVALADRTLALLVDHLFSHLLKIINICSHILDDVVPGPTLKATLPSLTNPPSLSPIR
RKAKEKEVTEQATVAISPKKTSENSPAPRPSDTSSSTPPSKSSSTLGNFYPLPSYLKLYD
VLKATYANYKVTLDLQNVNEKFGGFLRSALDVLSQILELATLQDIGKYVEEILCYLKSCF
SKEPVMATVCVQQLLKTLFGTNLASQFDSLSSNSCRAQGKCQRLGSSSLRPGLYHCCFMA
PYTQFTQALADASLRNMMQAEQERDTSGWFDILQKVSAQLKTGTTNMAKHRADKNIIHNH
IRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEY
IEVGQFRESEAIIPSVFFFLVLLSYERYHSKQIIGIPKIIQLCDGVMASGRKAVTHAIPA
LQPIVHDLFILRGANKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHRENEE
KWKRLSRQVADIILPMLAKQQMQIDSHEALGILNTLFEILAPSALRPVDMPLRSMFVTPS
TMASVSTVQLWVSGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQTINRLRNGESKV
PPTQEISTDEQDRFLPEETFSRFLIQLVGILLEDIASKQLNVETSEQQHTFYCQELGTLL
MCLIHTFKSGMFRRITAAATKLFTESGPHGLHFYTLERLNDLVKSMIATHPSLVLLWCQI
LLLVNYTNSSWWSEVHQTPKRQSLSSAKLLSPQPSGDPHEEDGGSKLSICNREIVRKGSL
ILFCDYVCQNLHDSEHLTWLTVNHVQELISLSHEPPVQDFISAIHRNSAASGLFIQAIQS
RCENFASPTAVKKTLQCLEGIHLSQSGAVLVLYVDKLLSTPFRVLAHMVDTLACRRVEML
LAASVQNSTAQLPVEELDRIQEYLQNTGLAHRHQRLYSLLDRFRLTVAPDTISPSPLVTA
HPLDGGNHPDLETLIPDKDWFCSLVKSQCYTKSAFALPEGAELMNRLPEQELIPFMMHQD
FNISLLAPCLSLGAQELSRGLRSHFEAARLVTLHQVTEVVQKLPASHQVFQPTQPVGLSP
YWNKLSNIYGDPEMFQFTMVLAQALSQYLVSLSKLPASLRIPPEKENDIVKFVVMLLEIL
SWHLARKQVPLSMDLQAVLDCCCLALQQTELWNLWASAENTSQASSLIHCTRFILEAVAI
EPGNRLLNPEKRKTVQKASNDNEKDSQTPNSESITATCEVVAELVECLQSVLALGHKKNT
PIPAFLTPVLRNIIISLSRLPLVNSYARVPHLVWKLGWSPKPTGEFRTTFPEIPVEFLQE
REVFKEFIYRINTLGWTNRMQFEETWASLLGVLVTQPIVMDQEENQQEEDMERTQINVLA
VQAITSLVLSAMTIPIAGNPAVSCLEQQPRNKTLKALDTRFGRKLNIIRGIIEQEIQEMA
SKRDNVASHHVYQMWDPVPSLAPSTTGSLISHEKLLLQINTEREMGNMTYKLGQVSIHSV
WLGNSITPLREEEWGEDEDDESDMPALSSPPSSPINSRKHRAGVDIHSCSQFLLELYSQW
ILPSSPSKKTPVTLISEVVRSLLAVSDLFTERNQFEMMYATLTELRKVHPPEDEILLQYL
VPAMCKAAAVLGMDKAVAEPVSRLLESTLRSAHMPSRIGALHGILYILECDLLDETAKQL
IPVITEYLLSNLRGVAHCVNLHNQQHILVMCAVAFYLIENYPADVGPEFSSGIIQMCGVM
LSENEGSTPSVIYHCVLRGLERLLLSEQLSQPDCEALVKLSVDRVNVLSPHRAMAALGLM
LSCMYTGKEKGSPGRSADLHSAAPDSESVIVAMERVSVLFDRVRKGFPFEARVVTLILPQ
FLDDFFPPQDVMNKVIGEFLSNQQPYPQFMAKVLYKVFQSLHTTGQSSMVRDWVMLSLSN
FTQRTPIAMAMWSLSCFFVSASTSQWISGILPHIISRMGKSEQVDLNLFCLVAIDFYRHQ
IDEELDRRAFQSIFEVVSSPGNPYHRLLTCLQSVHKIAPC
NT seq
9303 nt
NT seq
+upstream
nt +downstream
nt
atggccgccatggagaagctgatgcgggccttcgaggcgctgcgctccttccagcaacag
cagctgccgccgccgccgcctccgccgccgcagcccagccccgccgccggccctgcgccc
gaggagccgcccgcccgcccaaagaaggagctgtccacgtccaagaaagatcgggtcaat
cattgcctaacaatatgcgaaaacatcgtggctcagagcttaagaaattctccagaattc
cccaagctgttgggaatcgccatggaactcttcctcctgtgtagcgatgacgcagagtct
gatgtcaggatggtctctgacgaatgtctcaataaagtgataaaagctttgatggattct
agtcttcctaggttacaattggaactctacaaagagattaaaaaaaacggcgcttcccgg
agtttgagggctgctctgtggagatttgctgagcttgcgcaccttgttagacctcagaaa
tgcagaccgtactttgtgaacctcctgccctgcttgacccgagtcagccggcggcccgaa
gaatccgtgcaagagaccttggctgcggccatgcccaaaatcatggcagcttttggcaac
ttcgcaaacgacagcgacatcaaggttttattaaaagctttcataggtaatcttaactcc
aattctccaaccatccgtcggacggcggccgcagctgcggtgagcatctgtcagcattca
cgaaggacgcaatatttttacactcggttgcttcaagtattgctaggactgttgtgcccc
aaggaagaagagcaccccagtgtcttgattcttggggtgttgctcaccttgaggtacctg
atcccgttgctgcagcagcaggtgaaagacaccagcctgaagggcagctttggggtgatc
cagaaagaaaccgagatttcgccttccttggatcaactcatacaggtgtacgaactgagt
ctccattacactcagcaccgggatcacaatgtggtgaccggatcactggaattgttacag
cagctcctcaggacgcctccccccgacctccttttggccctcacgatgcgtggggggctt
ttgcaagcggctgcagccaaagacgagattgtgagccggagccgcagcgacagcatcgtg
gaactgatagctggaggggggtcttcctgcagccctgtttttgccagaaaacaaaaagat
ttgccagccaaagtactttcaggggaagaaagcctggaagaggattccgaagccaggtct
caaaccagccaggtgggcttttcagggtctgggaaaagcgagctgaacagtgaattaact
tccacatcgggcgtctcgcccgcggccagctcggcctccgaccctccaggttatgacatc
ataacggagcaaccccgttctcagcacgtcttgcaatccgagtcggagatctctgcttgc
gatttgacgggtgccactccgaaagctgatacggacgacgacatgctgagcaggagctcc
agccagattagcgccatccagtccgatgtgaatgacggcacctcgtcgcccatcagcgac
agctctcagaccaccaccgaagggccggactcggcagtgaccccgtccgatttctctgaa
atgattctcgaaggcggtgagaaccaatactctggaatgcagattggacagctgcaggag
gaagaagacgaaacggccaacgttctacacgatgagactttggatccgttccgaaattcg
tgcctcgagcttcagcgatcccatttagcgaaaagtgtgagccacaggagggagccttcc
aacagcagcatggagaagtttgggcctaaagaagaaactgaactggctgaccatggaatt
aagctctccagaatgaaaggtgacatcgggggctataaggacggaagtgctgcgccgtta
gtccactgtgttcgcctcctgtcggcctcttttctgctcaccggagagaaaggggctctg
gtgccggataaagatgtcagggtcagtgtgaaagccttggccatcagttgcgtgggggca
gccgtggctctttacccggaagctttcttcagcagactctacaaaatgcccactgaaagt
aacaaagaagaaggagaagagcagtccgtgaaggacattgtgaattatatcgaccacgga
gacccgcagatcagagggacgaccgccattttatgcggcaccattatttattccatcctc
gtccagtcctgcttcagtgtggagagttggctggaaaatataaaagcctccatagggacg
ctggtggagtgcgtctccttgctacaaaagagcctgaaagacgagtcttcggtcacgtgc
aaactggcgtgcatagctgtgaggcactgcatcatgagcttatgtagcagcagccatagt
tccctggggttgcaactactggttgacctccttcttctgaggaacagctcctactggttg
gttaggacggagcttctggaaacggtggctgaaatagattttcggctaatccagtttttg
gaagaaagggacagcaaccagcatagaggggatcatcattacacggggctgttaaaactt
caggatcgggttttgaaggaagtggtcatttctctcctgggcgacgaagaccccagggtc
aggcgcgtggctgcggctgctttagtaaggctggtcccaaagctgttctatagttgcgac
gcagggcaggcggatccggtcgtagctctggctaaggagcagagcagcgtctacctgaag
ctcctgatgcacgaaaccccaccgacttcccactttgcagtgagcaccatcaccagaacc
tacaggggatacaacctgacgccaagtccggccgatttgacggtggagaacaacctttcc
agagtgatctcggccgtgtcccatgcattgacgacctcaccctccagatctctgactttt
ggctgctgtgaagcattgtgtcttttgtcctcatcgtttccggtttgtacttggaatgtg
ggatggcactgtggtttttctcacccgggaggcgttgaagagtctcgggacaagagcgca
gtcgggatggttggctttctgctctctctcctttcgtctgtttcattccctctggatctc
tctgcccaccaagacgccttaatcctggctggaaacttgctagcagctaccgcctccaaa
tctttgcaaaacccctggacgcacagtgaggacgaagccagcatccctgccgctaagcaa
gaggactcgtgggtggccctggcagaccggacccttgccctgttggtcgatcacctgttt
tcccatttgctaaagatcattaatatttgttcccacatattggatgatgtcgttcctggc
ccaacgctaaaggcgacgttaccgtctctcaccaacccaccttcgctgagtccaattcgg
cgcaaagcgaaagaaaaagaagttacggagcaagccacggttgccataagccctaaaaag
acgagtgaaaacagcccagctcccaggccaagtgacacttcaagctccactcccccaagt
aaatcctcgtccactctgggtaacttctatcctctcccatcgtatctcaagctctacgac
gttctgaaggccacctacgccaactataaggttacactcgatctccaaaacgtcaatgaa
aagtttggtggattcctgagatcagctttggacgttctgtctcagatcttagaactggca
actctgcaagacattggaaagtacgtggaagaaattctgtgttacctgaaatcctgtttc
agcaaagaaccagtcatggcaactgtgtgtgtccagcagttgctcaagaccttgtttggc
accaacttggcctcgcagtttgacagcttgtcttccaactcctgccgagctcagggcaag
tgccagcgcttgggctcctccagcttacggccgggcctttatcactgctgcttcatggct
ccttacacccagttcacccaggctctggccgacgctagtctgaggaacatgatgcaggct
gagcaggaacgggacacctcaggctggtttgacatattgcaaaaggtttctgcgcagctg
aaaacgggcaccacgaatatggccaagcaccgcgctgacaagaatatcatccacaatcac
atccgtctgtttgaaccgctggtcatcaaagcgctaaagcaatacaccaccactacatcc
gtacaactgcagagacaagtcttggatcttctcgcgcagctcgtccagctgcgggtcaac
tattgtcttctggactccgaccaagtatttattggatttgtgctaaagcagtttgaatac
atcgaagtcggccaattcagggaatccgaagccattattcctagcgtctttttcttcctg
gtgttgttgtcttacgagcgctaccactccaagcagataattggaattcctaaaattatt
cagctgtgtgacggggtcatggccagcggaaggaaagcagtgacacacgcaatcccggct
ctgcagcccatcgtccacgacctcttcattttaaggggagcgaataaagccgacgcgggc
aaagaattagaaacccagaaggaggtcgtggtctcaatgttgttgcggctcatccagtat
caccaggtgctggagatgttcattcttgtgctgcaacagtgtcaccgagagaacgaagag
aagtggaagaggctgtcgcgacaggtagccgacatcatcctgccaatgctggccaaacaa
cagatgcagatcgattcccacgaagccctggggatcttgaacactctgtttgagatcctg
gcgccttccgccctgcgccccgtggatatgccgctgaggagcatgtttgtgacgcccagc
accatggcttcagtgagcaccgttcagttatgggtctcgggcattctggctattctgcgg
gtcttgatttcccagtccaccgaagacatcgtcctctctcgcatccaagagctctccttt
tccccgtatctcatctcttgccaaacaattaaccggctgcggaacggggaaagtaaagtt
cctcccactcaggaaatctccacggacgagcaagatcgctttctgcccgaagagacgttt
tccagattcctaatccagttggtggggattcttctggaagatattgccagcaaacaattg
aacgtagagacgagcgaacaacaacacaccttctactgccaggaactgggcactcttctc
atgtgcttaattcacaccttcaaatcagggatgttccgaagaatcacggctgcggctacc
aagctttttaccgagagcggtccgcacggtctccatttctacaccctcgaaagattaaac
gaccttgtcaagtccatgatagccacccacccatctctggtgcttctctggtgtcaaatc
ctgctgcttgtcaactacaccaattccagctggtggtccgaagttcaccagacccccaaa
aggcagtctctctcaagcgctaagttgctcagccctcaacccagcggggatccccacgaa
gaagacgggggctccaaactcagcatctgcaaccgcgagatcgtgcggaaaggatccctc
atccttttctgtgactacgtgtgccaaaacctgcacgactccgagcacttaacctggctg
acggtcaaccacgtccaagaactcatcagcctgtctcacgaacctcccgtccaggacttc
ataagcgccatccacagaaactcggcggcgagtggccttttcatccaggctattcagtca
cggtgtgagaactttgcctccccgacggcggtcaagaagaccctgcagtgtttggagggg
atccacctcagccagtcaggggctgtgctggtcttgtacgtggacaagcttctctcgact
cctttccgtgtgctggctcacatggtcgacaccctggcttgccgtcgtgtggaaatgctt
ttagcggcctccgtgcagaacagcacggctcagttgccagttgaagagctggaccgaatt
caggaatatctgcagaacaccggattagcccacagacatcaaagactctactcactcttg
gaccgatttcgtctaactgtggctccggacaccattagcccctcacctttggttacggca
catcccctggatggagggaaccatcccgatctagaaacattaattccagacaaagattgg
ttctgttcactcgtgaagtcccagtgctacacaaaatcagctttcgctcttccagaaggt
gccgaactgatgaatcggcttcctgaacaggaattgatccctttcatgatgcaccaggat
ttcaacatcagcctcctcgccccgtgtttgagcctgggcgcgcaggaactctcccgaggg
ctgaggagccattttgaagccgcccgcctggtcacgctgcaccaggtgacggaagtagtg
cagaagctccccgccagccatcaagtcttccagccgacacagccggtgggattgtcgccg
tactggaacaaactcagcaatatttatggagacccagaaatgtttcaattcacaatggtt
ttagctcaggctttaagtcagtatctggtgtcgctttccaaactgccagcttctcttcgc
attcctccggagaaggaaaacgacattgtgaagttcgttgtgatgctgctagagatcctg
tcttggcacttagcacggaagcaggttcccttaagtatggatctccaggctgtgctggat
tgctgttgtctggcgttgcaacagacggagctgtggaatctctgggcatcagcagagaac
accagccaggcctcctcgctcatccattgcacccgattcatcctggaagcagtggcaatt
gaaccgggaaatcgcctcctgaatccagagaagaggaagacggttcagaaggccagcaat
gacaacgaaaaggattcacaaacaccaaattctgagtccattacggcaacttgtgaagtg
gtagccgagttggtggaatgcctgcagtctgtcttggccttggggcacaagaagaacacc
cccatccccgcattcctgacgccagttctgaggaacatcatcatcagcctgtctcggctg
ccattagtcaacagctacgctcgggttccccacctggtctggaaattgggctggtcccca
aagccgacgggtgaattcaggacgacgtttccagaaatcccggtggaatttctccaagag
agagaagtcttcaaagaatttatctaccgaattaacacactggggtggacaaaccgcatg
cagtttgaggaaacctgggccagcctcctgggagttctggtgacccagccgatcgtcatg
gatcaggaggaaaaccagcaagaggaagacatggaaaggacccagatcaacgttctggct
gttcaggcaatcacctccttggtgctgagcgccatgaccatcccaatagccggcaatcca
gccgtcagctgtttggagcagcagcctcgaaacaaaaccctgaaagctcttgacaccagg
ttcgggagaaaattgaacatcatccgagggattatcgagcaagagatccaagaaatggcg
tctaaaagagacaacgtggcttcccaccacgtataccagatgtgggaccccgttccgtcc
ctggccccctctactacaggttccctcatcagccacgagaagctgctgcttcagatcaat
acggagcgtgaaatggggaatatgacctacaaactaggacaggtctccatccattctgtg
tggctgggaaatagcattaccccattgcgggaagaagaatggggcgaagatgaagatgat
gagagcgacatgccagccctttcttcgcccccctcctcccccatcaattccaggaagcac
cgcgctggagtagacattcattcgtgctcccagttcctgctggaattatacagtcaatgg
attctcccgtccagcccaagcaagaagacacccgtcaccctcatcagcgaagtggtccga
tcccttttagccgtctctgacttatttacggagagaaatcagtttgaaatgatgtacgcg
acgttaactgaactgcggaaagtccacccgccggaagacgagatcctccttcagtatttg
gtccccgctatgtgcaaagcagcggctgttcttggcatggataaagctgtggcggagccc
gtcagccgcctgctcgaatcgacgctccgcagcgcgcacatgccgagccgaattggcgca
ctgcacggcatcctgtacattttggagtgcgatctcctggacgagacggcgaagcaactt
attccggtcatcaccgaatacctgctgtccaatctgcgtggcgttgcccactgtgtgaac
ctccacaaccagcaacacatcttggtcatgtgcgcagtggccttctacttaatcgaaaat
taccctgctgatgtcggaccagaattctcttccggaattattcagatgtgcggagtgatg
ctatccgaaaacgagggatccaccccgtcggtgatctatcactgtgtgctcagaggtctg
gaaaggctcctgctttcggagcagctctctcagccggactgcgaagcgctggtgaagctg
agcgtggaccgcgtaaacgtcctcagtccgcacagagccatggccgccttgggactcatg
ctgagctgcatgtacacaggaaaagagaaaggcagtcccggacgaagtgcagatctccac
tcggcagctcctgacagcgaatcggtcatcgtggcaatggagcgagtatctgtcctcttt
gaccgggtcaggaaaggattccccttcgaagcccgagtggtaactctgatcctccctcag
ttcttggatgactttttccccccgcaagatgtgatgaataaagtgattggagaattttta
tccaaccagcaaccctacccacaatttatggcgaaagtactctacaaggtcttccagtcc
ttgcatacgacgggtcagtcctccatggtccgagactgggtgatgctgtcgctctccaac
ttcacgcagcggacgcccatcgccatggccatgtggagcctttcctgttttttcgtcagc
gcttccaccagccagtggatttcaggaattcttccgcacattatcagcagaatgggaaaa
tcggaacaagtcgatctcaatttgttctgcctggtggctatcgatttttacaggcatcag
atcgacgaagaactggatcgcagagcctttcagtccatcttcgaggtggtctcttccccg
ggaaatccgtaccaccgtctgctgacctgcttacaaagcgttcacaagatcgccccgtgt
tga
DBGET
integrated database retrieval system
