Ahaetulla prasina (Asian vine snake): 131203629
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Entry
131203629 CDS
T09329
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131203629 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apri03400
]
131203629 (POLB)
Enzymes [BR:
apri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131203629 (POLB)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
131203629 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
131203629 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
HHH_3
Cdd1
HHH_2
NTP_transf_2
IMS_HHH_1
Motif
Other DBs
NCBI-GeneID:
131203629
NCBI-ProteinID:
XP_058050018
LinkDB
All DBs
Position
9:955955..969496
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKAPQENPNQAITDLLSELANYEKNVNRAIHKYNAYRKAASAISKYPSKIKSGSEAK
KLDGVGTKIAEKIDEFLSTGKLRKIEKIRQDDTSSSINLLTRVSGIGPAAARKLVDEGIK
TLEDLKKNENKLNHHQRIGLKYFKDFEKRIPRKEMLEMQDVILSEVKKVDPAYIATVCGS
FRRGAESSGDMDILLTHPDFTSESAKKPKLLHQVVEQLESIRFVTDTLSKGETKFMGVCQ
LPSQDDDGICPYRRIDIRLIPKDQYYCGVLYFTGSDLFNKNMRTHALEMGFTLNEYTIRP
LGVTGVAGEPLPVDSEKDVFDYIQWPYREPKERSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcaaggcgccgcaggagaaccccaaccaggccatcaccgacctcctcagc
gaattggccaactatgagaagaatgtgaacagagctattcataaatacaatgcttacagg
aaagcagcatctgcaatatccaagtaccctagcaagattaaaagtgggtctgaagcaaag
aaattggatggcgtaggaactaaaattgctgaaaagattgatgaatttttatctaccgga
aaattacgtaagatagaaaagattcgacaagatgacacaagctcttcaatcaatttactg
accagagttagtggcattggtcctgctgctgccagaaaactagtagatgaaggtattaaa
acattggaagacttaaagaaaaatgaaaataaattgaatcatcatcaacgcattggattg
aaatacttcaaagactttgaaaaaagaattcctaggaaggagatgcttgaaatgcaggac
gttatactgagtgaagtgaagaaagtagaccctgcctacatcgctacggtttgtggcagt
tttcgccgaggtgcagaatccagtggagatatggatatcctgctgacccacccagacttc
acttcagaatctgccaaaaagccaaagcttttgcatcaagttgtggagcagctggaaagc
atccgctttgtgacagacacgctctcaaagggggaaacaaaattcatgggtgtatgtcag
ctcccaagtcaagatgatgacggcatctgtccttacaggagaattgatatccggttgatt
cccaaggatcagtattactgtggagtcctttacttcaccggaagcgacctcttcaataag
aacatgcgaacccatgccctggagatgggcttcacccttaacgagtacacgatccggcct
ctcggcgtcactggagttgcgggggagcccctccctgtggacagtgagaaggacgtcttt
gactacatccagtggccgtatcgggagcccaaagagcggagtgaatag
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