Ahaetulla prasina (Asian vine snake): 131204244
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Entry
131204244 CDS
T09329
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131204244 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apri03000
]
131204244 (ARID1A)
03021 Transcription machinery [BR:
apri03021
]
131204244 (ARID1A)
03036 Chromosome and associated proteins [BR:
apri03036
]
131204244 (ARID1A)
Transcription factors [BR:
apri03000
]
Eukaryotic type
Helix-turn-helix
ARID
131204244 (ARID1A)
Transcription machinery [BR:
apri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131204244 (ARID1A)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131204244 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
131204244
NCBI-ProteinID:
XP_058051243
LinkDB
All DBs
Position
10:14978876..15070150
Genome browser
AA seq
2269 aa
AA seq
DB search
MAAQVAPAAAASSLGAPAPSELKKAEAQQRDCSPEEAGGEAAERGGEKQSESEGPPGKEL
QDGAESNGGGAGAEPDLKSPNGNPGPRPVATLNNNLPEPPGSGGGGGSSNSSDGVGTPQP
QQQQQQQQPPPPTHPAALAPPAYGFGQPYGRGAQAAAAVVAAAAFHQHGGQQSPGMAALQ
SGGLEQPYSGPAGPPQGPPPPQNSHGVGSAEHGFPNHQYNNYYPAAGRSAGAYPPPPQAY
ALSSPRGNAQSPAQAGAKPPASVFQQQRFGAMGPSAGGAGGGSIGGPSPQPTSTPTLNQL
LTSPSSTRGYQGYPGADYGTGPQDGGATAKAPAAPDIASQYSGATGQGWAAAGPGSQQRS
HHAPMSPGSSSAAGGPSLARSQQPSSPMDQMGKMRPQPYGGNNLYTQQQGPQSGQQQGHG
YPGQPYGPQTPQRYPVGTLSRTQTAMGTVSYAQQIPPYGQQGPTGYGQQSQTPYYNQQSP
HPQQQPSYAQQPPTQAPHAQPSYQQTQTQSQPPQLQSSQPPYSQPQPQPSHQQSPSPYPQ
QPAPGQQQHPQGQTPYSQQQSQSPYQQQQQQAQQSATSALAQPSATYPPSQSQQPSAYSQ
QRFPPPQELSQDSFGSHGSSATSMASSKGQEDVTLNLQSRPSSLPDLSGSIDDLPMGTEG
ALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLS
PAAVPGNQMPPRPPSGQSDSLLHSSINQSTIAPDRGYIQRNPQIPQYNSPQPGSALSPRQ
SSGGQMHTGIGPYQQNSLGAYGPQGGQYGPQGGYPRQPNYNAMPNANYPSPGMGGTMNPM
GAGNQIHGQTGIPPYPGLPSGRGLSHAAMGNRPYGPNMTTMPPQVGSGMCPPPGGRKAQE
AAAAAMHAAAVNSIQNRPSGYPHINQGAMMGTGPPYSQGINSMAGMLNPQGPPYQMGGNM
ANNSAGMAASPEMMGLGDVKLTPAAKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYEL
GGEPERKMWVDRYLAFAEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWR
ELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFATDNKKSQTKIQPPSP
AGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMAPLQSIRSNSVGLQDAFPDGSD
PTFQKRNSMTPNPGYQPTMNTSDMMSRMSYEPNKDPYGSMRKGSDPFMSSGQGPNSGMGD
PYNRATGPGMSNMAMGPRQHYPYSHFERVRTEAGMGPEASLGTGTPQPNILPSTPDSGMY
SPSRYSQQPQQRHDSFSNHFPTQGTSSGSPFPSQQSTLYQPQQQNYKRTMDGNYGPPAKR
HEGELYNVPYSTGQGQAQQQLPPAQTQQTSQPQTAQPSPQQEMYNQYAGNTYSAADRRPA
AGPQNQFPFQFGRERVSAPSTQQSMPPQMIGGPIQSTPEGPQQGTMWQGRNDMGYSFSNR
QSTGSAPQGSAYHGVNRTEEMLHPDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQPN
YQAQPSMQNHIPQVSSPAPLPRPVENRTSPSKSPFLHSGMKMQKAGPPVPASHVTPAAVQ
PPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTI
NILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPEKCC
QSSNSPEGVEKEEPQNSSCEVEEEEEEGEEEAAFANKVTAPLESNEEKLVSKFDKLPVKI
VQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKLELLLTHKRASCNS
VLRKRSAAEGNPVTREGESPPPDGPPEKRITATMDDMLSARPGSLAEEEEVKTVEVTKES
GKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLSKRCVCVSNIIRSLSFVPG
NDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEML
RENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQR
LVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQ
GDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLMHMQNPPFEPTSVDMMRRAAR
ALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtggcccccgccgccgccgccagcagcttgggtgccccggctccgtcc
gagctgaagaaagcggaggcgcagcagcgggattgttcgccggaggaggcggggggcgag
gcggcggagcgcggcggcgagaagcagtcggaaagtgaaggtcccccgggaaaggaactg
caggacggggccgagagcaatggcgggggcgctggggccgagcccgacctgaagagcccc
aacgggaacccgggccctaggcccgtcgccaccctgaacaataacctcccggagccgccc
ggtagtggtggcggcggcggcagtagcaacagcagcgacggggtggggacgccgcagcca
cagcagcagcagcagcagcaacaaccgccgcccccgactcatccggccgccttagccccg
ccagcctacgggttcgggcaaccctacggtcgaggcgcccaggcggctgcggccgtcgtc
gcggccgctgctttccaccaacatggcggacaacaaagccctggcatggcagcgctgcag
agcgggggcctggagcagccgtactcggggcccgcggggcccccccaggggccgccccct
ccccagaactcgcatggcgtcggcagcgcggagcacggcttccccaaccaccagtacaac
aactactaccccgccgccgggcgcagcgccggcgcctacccgcctccccctcaggcctac
gccctgagctccccccggggaaacgctcaaagccccgctcaagccggggcgaaaccgccg
gcctcggttttccagcagcagcggttcggggccatggggccctcggccggcggcgcagga
ggcggcagcatcgggggcccttccccgcaacccacgtcgacccccaccctcaaccagctg
ctcacttcccctagctcgactaggggctatcaagggtacccaggggccgattacgggacc
ggcccccaggacggcggagcgacggccaaggccccggccgcaccggacattgcttctcaa
tacagcggggccaccggccaaggctgggcggcagccggcccgggaagccaacaaaggagc
caccacgcgcccatgagccccgggagcagcagcgccgccgggggaccgtcgctcgccagg
agccaacagccatccagtccaatggatcagatggggaagatgagacctcagccttatgga
ggaaacaacctatacacacaacagcagggacctcagtcagggcagcaacaaggtcatgga
tatccaggacagccatatgggccccagactccccagagatatccagtgggaactctaagc
aggacgcaaactgcaatgggcactgtctcttatgcacagcagataccgccttatggacag
caggggcctactggatacgggcagcagagtcagaccccttattacaaccagcagagtcct
cacccccagcaacagccttcttatgcccagcagccccccactcaggccccacatgctcag
ccctcttatcagcaaacgcaaactcagtctcagcctcctcagcttcagtcatcccagccc
ccctattcccagccacagccacaaccatcccaccagcagtccccatctccatatccccag
cagccagccccgggccagcagcaacacccccagggtcagactccctactctcagcagcag
tcccaatccccttaccagcagcagcagcagcaagctcagcagtctgctacctcggcgctc
gcccagccatcggcaacgtaccctccgtctcagtcacagcagccgtcggcttattctcag
cagcgcttcccacctccacaggagttgtcacaggactcatttggctcccatgggtcatct
gccacgtcaatggcttccagtaaagggcaagaagatgtgactttgaatctccagtcgaga
ccctctagcttaccggatctctctggttcaatagatgacttgcctatgggtactgaagga
gcactaagtcctggcgtaagcacatcagggatttccagcagtcaaggagagcagagtaac
ccagctcagtctcctttctctccacatacctctccgcacttgccaggcattcgaggacct
tccccatcacccgttgggtcaccggctagcgttgctcagtcccgctctggtccactttct
cctgctgcagtgccaggcaaccaaatgccacctcgaccaccgagtggccaatcagatagc
ctcttgcattcctccattaatcagtcaaccatagctccggatagaggttatatacagagg
aatccacagattccccagtataattctcctcagcctggatctgccttatctccacgtcag
tcttctggaggacagatgcacactgggattggaccgtaccaacaaaattctttgggcgct
tatgggcctcagggcggtcagtatgggccccaaggtggttatcccaggcagccaaactac
aatgcgatgcccaatgcaaattaccccagcccaggaatgggaggaaccatgaacccaatg
ggagcagggaatcagatccatggtcaaaccggtataccaccctaccctggacttccatca
gggagaggactgagtcacgctgccatgggcaataggccttatggacccaacatgaccacc
atgcctccccaagtaggaagtgggatgtgtcctccaccaggtggtaggaaagcacaagaa
gccgctgctgcggctatgcatgctgctgctgtcaattcaatccagaataggccatctggt
taccctcacattaaccaaggagcaatgatgggaactggtcctccctatagccaaggaatt
aatagcatggctggcatgctgaatccccagggtccgccatatcaaatgggtgggaatatg
gccaacaattctgcagggatggctgcaagtcctgaaatgatgggacttggagatgttaaa
ttaacccctgcagcaaaaatgaacaataaagcagatggaacaccaaaagctgaatccaag
tcaaagaaatccagttcctccaccactacaaatgaaaagattactaaattatatgagctg
ggtggtgagccagagagaaagatgtgggtagatcgttatttagccttcgcggaagagaaa
gcaatgggaatgaccaatcttccagcagttggaaggaaacctttagacctgtatcgactc
tacatttctgtgaaggagattggagggctgactcaggttaacaagaacaagaaatggcgg
gagttagctaccaatttgaacgtgggcacctctagcagtgcagcgagctctctgaagaag
cagtatatccagtgtctctatgctttcgagtgcaagattgaacgaggtgaagaccctccc
cctgacatctttgcaacagataacaagaaatcacagaccaaaatacagcctccatctcca
gcgggttcaggctccatgcaaggtcctcagacacctcagtccactagtagctccatggcc
gaaggaggagacttgaagcccccaactcctgcatctacaccgcatagtcaaatggcacct
ttgcaaagcatcaggagtaactcagtaggccttcaggatgcctttcccgacggcagtgac
cctactttccagaaaaggaactccatgactccaaatccagggtaccagcccaccatgaat
acttccgacatgatgagtcgcatgtcctatgagccaaataaggatccatatggcagtatg
agaaaaggaagtgatccctttatgtcctcagggcaaggtcccaacagtggtatgggagat
ccttataatcgtgctacaggtccaggaatgagtaatatggctatgggaccgaggcaacat
tatccatacagccattttgaaagagtgagaaccgaagcaggtatgggacctgaagccagc
ttgggaactggaacaccccagcccaacatcttgccttccactccagattcaggaatgtat
tctccgagccgctattctcaacaaccacagcagcggcatgattcctttagcaatcacttc
cctactcaaggtacatcctctggcagtccctttcctagccaacagtccaccttatatcag
ccacagcagcagaactacaagagaacaatggatggcaactatggtccaccagccaaaaga
cacgaaggagagctatacaacgtaccatatagcacaggccaaggacaagcccagcaacaa
ctccctccagcacaaacacaacaaacgagccagccccagacagctcaaccttcccctcag
caggaaatgtataaccagtatgctgggaatacatactctgctgcagatcgccggcctgcc
gctgggcctcagaaccagttcccattccagtttggcagagagagggtctctgctcccagt
acgcagcaaagcatgcctcctcaaatgataggtggcccaatacagtccactccggaaggc
ccacaacagggcaccatgtggcaagggcgtaacgatatgggttacagcttttcaaatcgg
cagagcactggctctgcgccccaagggtctgcctatcatggagtgaatcgaaccgaagaa
atgctacatccagatcagagagttaaccacgagggaccgtggccttctcatggcaaccgc
cagcctccttatggtccttctgcccctgtgcccccaatgacaaggccgccccagcctaac
taccaggcccagcccagcatgcagaatcacattcctcaggtatctagtccagcacctctt
cccaggccggtggaaaaccgcacctctccaagtaaatctccattcctgcattcgggaatg
aagatgcagaaggcagggcctcctgttccagcctcacacgtaacaccagcagctgtccaa
cctcctatgatacgacgcgacatcactttcccacctggctcagtggaagctacacaacca
gtgctgaagcagaggcggcgcctgaccatgaaagatatcggaactcctgaagcatggaga
gtgatgatgtctctaaagtctgggttactggctgaaagtacgtgggccttagataccata
aacatcctactctatgatgacaacagcataatgaccttcaacctcagccagctgccagga
ttgttggaactattggtggaatatttccgacgttgcctcattgaaatctttggaatcctg
aaggaatatgaagtgggtgatccagggcaaagaactctgttggatcctgaaaagtgttgc
caatcttcaaattctcctgaaggagtggagaaagaagagccacagaattctagctgcgag
gtggaggaagaggaggaggaaggggaggaagaggctgcctttgcaaataaagtcacagca
cctctagaaagcaacgaggagaagctagtcagtaaatttgataaacttccggtcaagata
gtgcagaagaatgacccattcgtggtagattattccgataagcttggtcgggtacaggaa
tttgagagtggactgttgcactggcggattggtgggggagacaccactgaacacatccag
acccactttgaaagcaaattggagttactgctgactcacaaacgggcttcctgcaactct
gttctgagaaaacgctctgcagcagagggcaaccctgtcacccgagagggagagtcccct
ccacctgatggccctcccgagaaaaggataacagctactatggatgacatgctttcagcc
cgaccaggctccttggcagaagaagaggaggtcaaaactgtggaggtaacaaaggaaagc
ggcaaatttccatttggcattagtccagctcagagccacagaaatattaaaatcttggag
gatgaacctcacagtaaagacgaaacgcccctctgcacgctcctggactggcaggactcg
ctgtctaaacgctgcgtctgcgtatctaacatcatcaggagtttgtcgtttgtgccaggc
aatgactttgagatgtcaaaacatcctggtctgctgttgatcctcgggaaactgattctc
ttgcaccataagcacccagaacgcaaacaggcacccctgacgtacgagaaggaagaggag
caggaccaaggagtgagctgcaacaaagtggagtggtggtgggactgcctggagatgctg
cgcgaaaacactttggtcacgctggccaacatctctggccagttggacctttctccatat
ccagagagcatctgtttgcctgtactggatggacttctccattgggcagtgtgtccttca
gcagaagcccaagacccttttccaaccctcgggcctaatgctgtcctctccccccagaga
ctggttttggaaaccctcagcaaactcagcatccaggacaacaatgtggatttgatcctt
gcaacgccaccttttagtcgcttggagaaactctacagcaccatggtgcgctttcttagt
gaccgaaagaatcccgtatgtcgggagatggctgtggtactactggccaatttggcacag
ggtgacagcttggcagctagagctattgccgtgcagaagggcagcattggcaatctgttg
ggctttttggaggatagcctggcagctactcagttccagcagagccaagccagcttgatg
cacatgcagaaccctccctttgagccgaccagtgtggacatgatgcgtcgggcagctcgg
gcgctgctcgccctggccaaagtggacgagaaccactcggagttcacgttatacgaatca
cggctgttggacatctccgtgtcacctctgatgaactcattggtttcacaagttatttgt
gatgtactgtttttaattggccaatcatga
DBGET
integrated database retrieval system
