Ahaetulla prasina (Asian vine snake): 131204518
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Entry
131204518 CDS
T09329
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04510
Focal adhesion
apri04512
ECM-receptor interaction
apri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131204518 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131204518 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
131204518 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
apri00535
]
131204518 (COL9A2)
Proteoglycans [BR:
apri00535
]
Extracellular matrix (ECM) proteoglycans
Others
131204518 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
131204518
NCBI-ProteinID:
XP_058051883
LinkDB
All DBs
Position
10:7608451..7679160
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AA seq
673 aa
AA seq
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MARLLDLCFLLQSFVFSLSQLQGPPGEPGPRGPPGPPGVPGADGIDGAKGAPGLPGPDGA
PGKPGIDGLTGAKGEPGRVGRLGPKGQPGLPGPPGLPGPGFPGPPGPPGQVGLPGEMGPL
GLKGERGPDGPQGPPGPPGKPGPIGRIQGAEGSADFVCPSNCPPGLKGPPGLQGLKGHRG
RSGASGEPGRQGRLGPRGDVGLPGEQGIQGPPGPEGPRGHPGMAGPKGEMGPQGYKGMTG
SIGAVGPLGEDGPKGPPGQVGEKGEIGPRGFRGAEGEMGPKGTRGLPGIDGKDGFPGVPG
VKGSVGQPGLPGPLGHRGVAGLPGTPGSKGGPGDKGEPGTRGPSGLPGPSGKIGEPGPPG
AVGPQGIAGVKGDRGERGPTGPSGPQGKVGPKGDQGPPGIPGPQGLPGVKGSKGFPGKSG
SKGGIGNPGVEGLSGGKGQKGELGEPGSKGEPGICGEPGFPGPPGDIGAPGIRGFPGPPG
PRGPNGERGIPGMPGLRGTPGRDTGDQHIVDVVIKMLQEQLAELAVSAKRETLGGSGMMG
PPGPPGPPGPPGSQGPHGHPGSRGLPGILGAVGQIGNTGPKGKRGEKGDHGEPGHGHQGM
PGPPGIPGPPGQPGQALNGKHGERGVPGAPGEAGRPGLPGPSGLPGFCEAVVCLGASASA
QLTEVGSVKGPSY
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggctagattgctggatctctgcttccttctccaaagctttgtcttctccttaagccag
ttgcaaggtccgccaggagaacctgggccacggggccccccaggtccacccggtgtgcca
ggagcagacggcattgatggggccaaaggagctccaggcctaccaggaccagatggagct
ccaggaaaacccggaatagatggccttacgggagctaaaggagagccaggccgtgttgga
agactaggtcccaaaggccagcctggacttcctggaccaccagggctcccaggacctgga
tttccaggacctcctggccccccaggtcaagttggacttcctggagaaatgggaccttta
ggacttaagggggaacgtggaccagatggaccacaagggcctccaggacctcccggaaag
ccaggcccaattggtcgtatccaaggagccgaaggcagtgctgattttgtgtgtccaagc
aactgcccacctggactcaagggacctccgggtttacaggggttgaagggacacagaggg
cgatcaggagcctctggagagcctggaagacaaggccggctgggtccaaggggtgatgtg
gggctgcctggagaacaaggcattcagggtcctcctggcccagagggtcccagggggcat
ccaggaatggcaggaccaaaaggggagatgggtcctcaaggttacaaaggcatgactggg
agtattggagctgttggtcccctgggtgaagatggtcccaaggggcccccaggacaagtt
ggagagaagggagaaattggtcctcgtggtttcaggggtgctgaaggtgaaatgggcccc
aaaggaacacggggtcttcctgggattgatggcaaagatggatttcctggagttcctggg
gtgaagggaagtgtgggtcaaccaggccttccagggcctttgggacacagaggagtggct
ggtttgccaggcactcctgggagcaaaggtggtcctggagacaagggtgaaccaggaaca
cgtggcccgtcaggcttacctgggccatctggaaaaattggagagccgggtccaccagga
gcagtgggtcctcaaggcatcgctggggtgaaaggagatcggggtgagagggggcctacg
ggaccttcaggtccacagggaaaagtgggtcctaaaggagaccaggggccccctggaatt
ccagggccacaggggctcccaggagttaaaggcagcaagggcttcccgggaaaaagtggc
tccaaaggcggcattgggaatcctggtgttgaaggcctttctggaggaaaggggcagaag
ggggaattgggggaacctggatcaaagggggagccaggcatttgtggggagcctggtttt
cctggacctcctggagacatcggagcacctggaatcagaggtttcccgggacctcctggc
cctcgaggacctaatggggaacgtggtatacctggaatgcctgggttgcgaggtacccca
ggcagggacaccggagatcagcatattgttgatgtcgtgatcaagatgctacaagaacaa
ctggccgagttagctgtgagtgcgaaaagagaaactttgggtggaagtggcatgatggga
ccacctggccctccagggcctcctggaccacctggctcccaaggcccccatggacatcct
ggttcccgtggccttccaggaatcttaggagctgttggacagataggcaacactggaccc
aaaggaaagaggggtgagaaaggagaccatggagaacctggccatggacatcaagggatg
ccagggcctccaggcataccaggtccccctggtcaacctggtcaagctctcaatggcaaa
catggagagcgaggtgttccaggtgctccaggagaagcaggacgtcctggtttacctggg
ccttctggccttcctgggttttgcgaggcagttgtctgccttggggcttctgcttcagct
cagctaactgaagtaggttctgtcaaaggaccttcatactga
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