Ahaetulla prasina (Asian vine snake): 131205006
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Entry
131205006 CDS
T09329
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131205006 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131205006 (CLP1)
Enzymes [BR:
apri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
131205006 (CLP1)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
131205006 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
AAA_18
ATP_bind_1
TniB
AAA_22
AAA_16
CbiA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
131205006
NCBI-ProteinID:
XP_058052761
LinkDB
All DBs
Position
1:254121742..254136389
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AA seq
425 aa
AA seq
DB search
MAEETGDEKKLVAKFELERETELRFEVEASQTVQLELMTGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLTGRTEVAYVSKDTPMLLYLNTHTALEQMRWQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSISIPGTMGALYIERPADVEEGFSV
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASISGCIINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREFRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADGTDENISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagactggagatgaaaagaaactggttgccaagtttgagctggagagagag
actgaactccgctttgaagttgaggcctcacaaactgtccagctggaacttatgacaggc
atggctgaaatctttggaactgagctaacacgaaacaagaaattcacctttgatgctggt
gctaaagttgctgtatttacttggcatggttgttctgtgcaactaactggtcggactgaa
gtagcctatgtctccaaagatacgcccatgcttctctatctcaacacacacacagctctg
gagcagatgcggtggcaggctgagcgtgaagatgagcggggacctcgggtaatggtggtg
ggccccacagatgtaggcaagtcaactgtctgccgcctgctattgaattatgctgtgcgt
cttggacgccgacccacatttgtggaactggatgtaggccagggctcaatttcaatccca
ggcactatgggagcactctatattgagcggcctgcagatgttgaagaaggattctctgtt
caagctcccctagtttatcattttgggtccaccacaccaggcacaaacatcaaactctat
aacaaaatcacatctcgcttggctgatgtgtttaatcaacgctgtgaagtgaaccgcaga
gcttcaatcagcggctgtatcatcaatacttgtggctgggtgaagggatctggatatcag
gcacttgtacatgctgcttctgcttttgaagttgatgttgttgtagtattggatcaagaa
cgcctctacaatgaactgaaacgagacctgcctcactttgttagaactgtgctacttccc
aaatcaggtggagtggtagagcgctctaaagatttccggcgggagtttcgtgatgaccgc
atacgtgaatacttctatggcttccgaggatgcttctatccacatgcttttgatgtcaag
ttctctgatgttaagatatataaagtgggagctcccactatccctgactcatgtctgcct
ctgggcatgtcacaggaagacaatcaactcaagctagtcccagttacacccggccgtgac
atggttcatcatctattaagtgtcagcactgcagatggcactgatgagaacatctctgag
accagtgtggctggtttcattgtggtaactggagtagatctggaacgccaagtgttcaca
gtgctttcaccagcaccacgcccattgccaaagaatttcctgctcatcatggacattcgt
ttcatggatctcaagtag
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