Ahaetulla prasina (Asian vine snake): 131205176
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Entry
131205176 CDS
T09329
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
131205176 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
apri01009
]
131205176 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
apri04515
]
131205176 (PCDH11X)
Protein phosphatases and associated proteins [BR:
apri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131205176 (PCDH11X)
Cell adhesion molecules [BR:
apri04515
]
Cadherins
Protocadherins
131205176 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
TMEM154
Cadherin_4
Ion_trans_2
DUF6249
Motif
Other DBs
NCBI-GeneID:
131205176
NCBI-ProteinID:
XP_058053134
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All DBs
Position
11:8670937..9455957
Genome browser
AA seq
1275 aa
AA seq
DB search
MDLLSGTYLLAVLLVCVVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAVDPDIGVNGIQHYELLK
PKTAPKRTFGSITNEQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GNPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSSQISSLAKRLFAIDNITGLITVKEPLDREESPVHKLTILASDGSSTPSRATVTVN
VTDINDNIPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPVIGLSIPENNAPGTQLTKISATDADSGRNAEISYMLGLDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAIVTLSILNGKDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLPRTSTAKVTINVVDVNDNRPVFVIPSTNYSYDLVPMSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNVTLKEKVISADHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNGSYVQELVRRNMETPVGQNVGDGDITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSATPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKAPGS
VHTRQHSKDVGRPQTPLKETSLESWTQPPSQRRVTFHLPDGSQESCSDSGLGDHEPSSNT
SMTHPLPLGFPQEEYYEQTSPNSRTEGDGNSDPESITLLGRIQRQTFHFDWGFEEPKNCS
KVDQAIEVNLQKALTEASETCTQECLILGHSDNCWMPPSLTQYQQSNPPLPAFGFQQGWV
RGAISEGRHTLGRAGCKEDTEKGQGGLRPQFYNACDRLCTTEDPVKLIPLANFIPPAQAV
PASGSSSTLIHEHQL
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctttctgggacttacctcttggcagtcttactggtctgcgtcgtgtttcag
tcgggggctcaggagaagaattacaccgtgagggaggagttaccggaaaatgtccttatt
ggcaacctgctgaaggatctcaacctgactcttgaccccgatgtgcccctttcatccccg
cttcaattcaagctcgtgtacaagactggcgatgtccccctcgtccgcgtggaggagaat
accggagaaatattcaccacggccaaccgcatcgatcgggaaaagctttgctctggcatt
tttagtgagaaccgttgtttttatgaggtggaagtcgcggttcttcctgatgaggtcttc
aggctggtcaagattcgattcctgattgaggatataaatgacaacgcccctcttttcccg
tccacggtcatcaatatctccatccccgagaacaccgcgatcaattcccgctattctgtc
ccgtcggctgttgatcccgatattggagtgaatggcattcaacattatgaactccttaag
cccaaaaccgctccgaaacggacttttggatccattacaaatgaacagggtcaaaatgta
tttggacttgatataattgaaacacccgaaggagacaagtggccccagttgatagtgcaa
caaattcttgacagggagcagaaggacacctatgtgatgaagattaaagtggaggatggc
ggaaaccctccgagatccagcacggccattctccaagtcaccgtcactgatgtgaatgac
aaccgtccggtcttcaaggagaatgacattgaagtcagcgttcctgaaaatgcacctgtg
ggcacctccgtttctcaacttcatgccaccgatgctgacttgggatccaatgcccagatt
cacttttattttagcagccagatctccagtttggccaaaaggctatttgccattgataac
attactggccttatcactgtcaaggagcccttggaccgggaggaatccccagtacacaaa
ttaaccattttggcaagtgacggcagctccacaccctccagagctaccgtaacagtgaat
gtcacagacattaacgataacatcccctccatagacacgaggtacattatcaatccagtc
aacgggactgtgttactgtccgagaaagcaccactcaacactaagattgccctgataact
gtaatggataaggatgctgatcttaacggcaaagttacttgcttcacggaccatgatgtc
ccgttcaggttaaagccggtgtttgataatcagtttctcctggaaacagccaccttctta
gactacgaggccaccagagagtacgccatcaaaatagtggcttcggattcaggaaagcca
cccttgaaccaatctgcgatgctactgatcaaaatcaaagatgaaaatgacaacgctcca
gtgttcacgcaacccgtgatcgggctctccattcctgagaataatgcccctggaacccag
ctgaccaagataagcgctaccgatgctgacagtggtcgcaatgctgaaatcagctacatg
ctgggattggatgctcctcccattttcaacctggatcgccgtacaggcattctgacagct
gtgaggaaactggatagagaaaaacaagatcgctattcattcacagtgctggccaaagat
aacggcatgccacctttgcaaaccaatgcaaccgtgactgtttctgttttggaccaaaat
gacaacagccctgccttcacacacaacgagtacaacttctatgtgccggaaaatctaccc
atgtatggcaccgttgggctgatcactgtaacagacgcggactctggagaaaatgcaata
gtgaccttgtctatattaaatggcaaagataatttcattatcgatcctctcactggagtc
ataaggccgaatattacttttgacagggagcagcaaggatcttatacttttcaggtgaaa
gcagtggacgggggcaggctaccacgcacctccacggctaaagtgactatcaacgttgtc
gacgtgaacgacaacaggcctgtttttgtcattccttccaccaactactcctatgacttg
gttccgatgtccgccagtccgggctccgtagtgacaaaagtgtttgctgtggacaacgat
actgggatgaacgctgagctgcgttacagcattatcggtgggaattcgcgagggttgttt
acgattgatcagttaacgggcaacgtcactctgaaggagaaagtcatctcagcagatcat
ggattgcacagactggtaatcaaagtcaatgatttagggcagcctgaatctttatacacc
atagcattagtgcatctatttgtgaacgaaacagtcaccaacggatcctatgtccaagag
ttggtgcgccgaaacatggaaacaccggttggccaaaacgttggggatggagacattacc
ccacaaaccaatgactatgtcaaaatcatcattgccattatcgcaggcaccatgacagtg
atactggtcatttttgtgacagctctggtccgttgtcggcaaactcctagacacaaagtg
gtccagaaaagcaaacagagtggcgagtgggtttctccaaatcaagaaaaccgtcagatc
aagaagaagaagaaaaagaagaagcggtctcccaaaagtctccttctaaactttgtgacc
attgaagaatctaagcctgatgaccctggccatgaacacatcaatggcaccttggacatc
cctgtagagctagaagaacagactatgggaaaatataactgggccactacaccaactacg
tttaaaccagacagtccagatttagcaaagcactacaagtctgccactccgcagcccacg
tttcagattaaacctgagactccagtaccaccgaagaaacatcatgtcatacaggaactg
cctctggataacacatttgtggtgggttgtgattccctctccaagtgttcttccagtagc
tcggacccatacagtgtctccgaatgcagctgtcaaggagggttcaaggctcctggctct
gtgcacaccagacagcattcaaaagatgtgggaagacctcagaccccattaaaagagaca
agtctagagtcatggacccaaccaccgtcccagcgccgagttacatttcatctccccgat
gggtctcaagaaagctgcagtgacagtgggctgggagaccacgagcccagcagtaacacc
agtatgacccatcctttgccactgggtttccctcaagaggagtactatgagcagacctca
cccaacagtcggacagagggagatggaaactcagatccggagtccattacattgttgggc
agaatacaaaggcagactttccattttgactggggatttgaagaacctaaaaattgcagc
aaagttgaccaagctattgaggtgaacctccaaaaagctctcaccgaagcttctgaaacc
tgcacgcaggaatgcctcatccttggccactctgacaattgctggatgcctccttcgttg
acacagtaccagcaatccaatccgcctttgccagcttttggcttccagcagggatgggtt
cgaggagccatctcagaaggaagacacacccttggacgggccggttgcaaggaggataca
gagaaaggccaaggggggcttaggcctcagttctacaatgcctgtgatagactctgcacc
actgaagacccggtcaaactgattcccctggcaaatttcatacctcctgcccaggccgtg
cctgcctctggaagcagcagcactctgatccatgagcaccagctataa
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