Acinetobacter proteolyticus: PY247_21305
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Entry
PY247_21305 CDS
T08916
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
aprl
Acinetobacter proteolyticus
Pathway
aprl03030
DNA replication
aprl03430
Mismatch repair
aprl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PY247_21305 (dnaQ)
03430 Mismatch repair
PY247_21305 (dnaQ)
03440 Homologous recombination
PY247_21305 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aprl03032
]
PY247_21305 (dnaQ)
03400 DNA repair and recombination proteins [BR:
aprl03400
]
PY247_21305 (dnaQ)
Enzymes [BR:
aprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PY247_21305 (dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
PY247_21305 (dnaQ)
DNA replication proteins [BR:
aprl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PY247_21305 (dnaQ)
RNase H
PY247_21305 (dnaQ)
DNA repair and recombination proteins [BR:
aprl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PY247_21305 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
RVT_3
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WEI18612
LinkDB
All DBs
Position
4366151..4367506
Genome browser
AA seq
451 aa
AA seq
DB search
MSQTITLYVDGACKGNPGLGGWGAYVITEQGEHKLFGGEPETTNNRMELQAAIEGVSFCP
TDARLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCANREIEWNWIKGHA
GHAGNEMADQLANLGAEQTAQQLKSATQANADTKKPESDWLLNDPFGLDIEVDSDEMIEE
SELEEVLDHMDEKAASDEVVEATPLNQHPHIVITRAKLDLQGPRQLILDTETTGFYYQDG
DRIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSENVHGISDDFLKDKPKYAEISDVLFD
FLKGAEIIAHNATFDMNFLDMEFKRTGLPPLSEVCEVTDTLAMAKNKHPGQKNSLDALVR
RYEIPARDRTFHGALLDAEILADVYLAMTGGQVSFDMDALSQTEQNQGKTTRQRVQIDLP
VIEPSEHELNEHETWVKQFEQKHGEPCLFAK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacaatcactctttacgttgatggcgcatgcaaaggtaacccaggtcttggt
ggttggggtgcgtatgtcattaccgaacaaggtgagcataaactgtttggcggtgaacca
gagacaaccaataatcgtatggagcttcaagcggcgattgaaggtgtttcattctgcccc
accgatgcgcgtttaatcatctggactgactccaattatgtcaaacaaggcatcaccgaa
tggattcacggttggaaaaagaaaaactggaaagatgttaaaaatccagatctatggcaa
aagctagatgccgtctgtgccaatcgtgaaatcgaatggaactggatcaagggccatgca
ggacatgcaggcaatgaaatggcagaccaattggccaacttaggtgctgaacaaacggca
caacaacttaaatctgcaacacaggctaacgctgatacaaaaaagcctgaatccgattgg
ctcttaaatgatcctttcggattagatattgaagtggatagcgatgaaatgatcgaagaa
tcagaacttgaagaagtattggatcatatggatgaaaaggcagcatcagatgaagtagta
gaagctactccattaaatcagcatcctcacattgtcatcaccagagcaaaattagattta
caaggcccgcgccaactgattctcgatactgaaaccacaggtttttactatcaagatggt
gaccgtattatcgaagtcggtgcgattgaaatgattaaccgcaagctcacaggcagctcg
attcatatctatatcaatcctgaaaaacctgtcggcgactctgaaaatgtgcatggtatc
agcgatgactttttaaaagacaaacctaaatacgctgaaatttccgatgtactttttgac
ttcctaaaaggtgccgaaattatcgcgcataacgcgaccttcgatatgaacttcttggat
atggagttcaaacgcactggattacctccgctttctgaggtctgtgaagttaccgatacc
ttggcgatggccaaaaataagcatcctggacaaaaaaactctttggatgccttggtccgt
cgttacgaaattccagcgcgagatcgtactttccatggtgcattactcgatgccgaaatc
ttggccgatgtttatcttgccatgaccggtgggcaagtttcatttgatatggatgccctt
tcacaaacagaacagaaccaaggcaaaaccactcgtcagcgagtacaaatcgacctccct
gtgatcgagccatcagaacatgaattaaatgaacatgagacctgggtcaaacaattcgaa
caaaaacatggagagccttgccttttcgcaaaataa
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