KEGG   Auxenochlorella protothecoides: F751_0448
Entry
F751_0448         CDS       T04132                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03030  DNA replication
apro03410  Base excision repair
apro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F751_0448
   03410 Base excision repair
    F751_0448
   03420 Nucleotide excision repair
    F751_0448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apro03032]
    F751_0448
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_0448
Enzymes [BR:apro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     F751_0448
DNA replication proteins [BR:apro03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    F751_0448
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      F751_0448
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 23611839
NCBI-ProteinID: XP_011395508
UniProt: A0A087SA98
LinkDB
Position
Unknown
AA seq 2125 aa
MGFTEYSAGPPRLGWLVNLNTVQTVDKSSNAAISAIMGYFLSQDGTMFRSAFPFSPYFYL
HVKAGQEAEVDSWLRRKHEGLILDTELVEREDLDLENHLSGAKRTLLRVSFRTQDQLSKV
RRELMPILYRNKSKRGTASVAGEESSRRWNRKGQGAEDALLDMREHDVPHHVRFAIDTDV
RCGAWYSVSAQQGRMSLEPRPEMVQRAEARVCAFDIETTKLPLQFPNAEHDQVFMISYMI
DRQGYLITNREVVAEDIEDFEYTPKPEFEGPFTIFNCENEAALLKKWFEHMRETKPSIFV
TYNGDFFDWPFIETRAHKHGLDMGAEIGFRCNRVSNETLSRSAVHMDCMHWVNRDSYLPQ
GSRGLKMVTKYKLGYDPVEVDPEDMVRFAAERPQSMASYSVSDAVATYYLYMTYVHPFIL
SLATIIPMPPDEVLRKGSGTLCEALLMVQAYKANVVAPNKHTSSTENMYGGRLLDSETYI
GGKVEALESGVFRSDIPCKFRLSSAAYQGLLDNLDADLKYAIETEGKMDMGDVTNYAEIR
AAIATQLEALRDCPIRDETPLIYHLDVAAMLQPSAITTDERCAACDFNKPGKTCLRPMEW
VWRGETFSATRTEYFSLKTQLQSEMFPPLGPGAPQRSWYELTSEERSKNLKARLKGYCQK
VYKRVLNKPTTELRSAGICQRENSFYYDTVESFRDRRYEYKGLNKEWKGRLDKAKASGNP
IRIQEAADMCVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTHTGANIIKRANE
LIGQIGRPLELDTDGIWCALPGSFPETFKVPGRGFKSQSGKTFKLSYPCAMLNVMVAANN
TNDQFAVLHDDRTKEYRTESRMSIEFEVDGPYKAMILPASKEEGKLIKKRYAVFNHDGTL
AELKGFELKRRGELKLIKVFQAEIFDQFLRGDSLQGCYDAVAGVANRWLDMLDTQGTDLT
DTELVDLISEMCVMSKSLEAYEGRKSCAVTCANRLSQFLGDERIKDKARRLGLVCNYVIA
RNPSSAPTSGRAIPVAIFSTEPAIARTYLRRWERLGSAIQKIITIPAAMQLIPNPVPRVA
HPDWLLRKVREKTDTHKQRRLDAMLGPATAKPSIGLAGAPHAPVEEEQPRVQGYPVALRA
AALSSEEDPASGEEAPSEACPSRHENYAQWLEVKKRLWRQGVEARKKRRTAAEPNHRRGG
REGPAQNPEAGAGGLAGMLRQQAASAASLHWQVVGIDHTEQPGVYKCWAVLGGRMHAIPL
RIPRTFFANLLAPPSHPLVADMGVLARRALPHGAAAATLVQIVMDEASFRAEQAALNERL
LALRALRVYEDTLPPTYNACLQLGCVTAFNAPSEARNLGSGVDLAELGMKTVTECDYLEP
GVLRHMALCQTSDAGRGLHLLILHVPVDQRLHIWVINPAPRSQAEITEGAATRVWTEATA
AVLERGDHPAGTLPTQPAMDISYARSDAQAYTAINRLLLGLRDRALGPTLLLVSSPEEST
LRQSLPSLRDWPTTAVSTPAQAVPFPALGWQLPALRAAASQALACPAWLEARLQAARYAH
LPVASMGRDWAIDAADALFARQLRAAGHLLWVSTPDAATAGGSLAARPPDRAEALLLEEQ
RTRTEVAAPGVYRTVCCEVRLTHLAVNAVLEAAALSELEGTALVDDGKGCGAAFVVLRSL
AQAWLDDASRHSNVCADTLLLNMYRWICSPASRLHDPALKQTVQSLMHKLLLHLVSELRR
LGVTVVHADATSLILCTGKRNLAAAVGYIDYILETLGKRELLQYLSFTPTRMWHALLYKD
RYDYIGIAARVPAVFMDALGQTGSLAEARLLQTHGEKLEVSAEELNAPRFDYHFTLKAPF
KLSMQDFLPSALHATFMTLVTEFLWLPWQAAMQGLEKGPSQGGSQASKDTSQSLEAQTLW
LRTALPNQFTSNLLKYVKYISMHVGANDGIEAHAFPERAGSHLSPVLVLRRQLLRMVHVK
EFSAEAVFQDPCASLVLRDVICPHCQDCQDLDVCKDPQLQAHDWRCGACGAPRDPVEVES
ALGDALGTLCDASVLQDLQCLKCHSVATEHLRAQCDHCGGPLATCRPAAETLARVRVFER
VARFHGMPVLEELAGWVLAQQGSTA
NT seq 6378 nt   +upstreamnt  +downstreamnt
atggggtttacagaatactcggcggggcctccccgtctgggctggcttgtgaacctcaac
acggttcagacagtggacaagagttctaatgctgcaatcagtgcaatcatgggctacttc
ctctcccaggatgggaccatgttcaggagtgccttccccttcagcccctacttttacctc
cacgtcaaggcggggcaggaggctgaggtggacagctggctgcggcgcaagcatgagggc
ttgatcctggatactgaactggtggagcgagaggatcttgatctggaaaaccacctgtcg
ggcgcgaagcgcaccctcctgcgcgtgtctttccgcacccaggatcagctgtccaaggtc
cgccgggagctcatgcccatcctctaccgcaacaagtccaagcggggcacagcctcggtg
gccggcgaggagtcgtcgcggcgctggaacaggaagggccagggcgccgaggacgcgctg
ctggacatgagggagcacgacgtcccccaccacgtgcgcttcgccatcgacaccgacgtg
cgctgtggggcgtggtactccgtctcggctcagcaagggaggatgtcgctggagcccagg
cccgaaatggtgcagcgggcggaggcacgggtgtgcgccttcgacatcgagaccaccaag
ctgcccctccagttccccaatgccgagcacgaccaagtcttcatgatctcctacatgatc
gatcgccaagggtacctgatcaccaacagggaggtggtggccgaggacatcgaggacttt
gagtacactcccaaaccggagtttgaaggtcctttcaccatcttcaactgcgagaatgag
gccgcgctgctcaagaaatggtttgagcacatgcgggagaccaagccctccatctttgtg
acatacaacggcgactttttcgactggccattcatcgagacgcgtgcacataagcatggg
ctggacatgggggccgagatcgggttcaggtgcaatcgtgtgagcaacgagacactgagc
aggtcagcggtgcacatggactgcatgcactgggtgaaccgcgactcgtaccttcctcaa
ggctctcgtgggctcaagatggtcaccaaatacaagctggggtacgaccctgtggaggtg
gatcctgaagatatggtccgttttgcagcggagaggccccaatccatggccagttacagc
gtatcagatgcagtagccacctactacctgtacatgacctacgttcaccccttcatcctg
agtctggcaaccatcatcccaatgccacctgacgaggtgctccggaaggggtcggggacg
ctgtgtgaggcgctgctcatggtccaagcctacaaggccaacgtggtggctcccaacaag
cacacgtcctccaccgagaacatgtatgggggcaggttgctggattctgagacgtacatt
ggcggcaaggtcgaggcactggagtctggagtattccgcagcgatattccctgcaaattc
cgtctttcttcggctgcataccaggggctcctggacaacctggacgctgacctcaagtat
gcaatcgagacggaggggaagatggacatgggcgacgtgacgaactatgcagagatcaga
gctgcaatagccacccagctggaggcgctccgagactgccccatcagggacgagaccccc
ctcatctatcatctggatgtggcggccatgctgcaacccagcgccatcaccaccgacgag
cgttgtgcagcctgcgacttcaataaacccggaaagacctgcctgagacccatggagtgg
gtgtggcgtggggagaccttctctgcgacacggaccgagtacttttcgttgaagacacag
ctccagtctgagatgttcccgcccctcggccctggggcgccacagcgcagctggtacgag
ttgaccagcgaagagcggagcaagaacctgaaggctcgcctgaagggctactgccagaag
gtgtacaagcgagtcctgaacaagcccactacggagctgaggagcgcaggaatctgccag
agagagaattcattctactacgataccgtcgagtccttcagggatcggcggtatgagtac
aagggtctgaacaaggaatggaaggggaggctggacaaggccaaggcttccggcaacccc
atccgcatccaggaggcagcagacatgtgcgtcctctacgactcactccagctggcgcac
aagtgcatcctcaactccttctatggatacgtgatgcgcaaaggggctcgctggtacagc
atggagatggctggcgtagtgactcacacgggggcaaacatcatcaagcgcgccaacgag
ctgatcgggcagattgggcggcccctggaactggacaccgacggcatctggtgtgcgctg
ccggggtccttcccagagacgttcaaggtgcccggccgtgggttcaagtcccagtccggc
aagaccttcaagctgagctatccctgcgcgatgctgaacgtcatggtcgccgccaacaac
acaaatgaccaatttgctgtcctccacgatgaccgaaccaaagagtatcgcaccgagtcg
cgcatgagcatcgaattcgaggtggatggcccatacaaggcgatgatcctgccggcatcc
aaggaggagggcaagctgatcaagaagcgctacgccgtgttcaaccacgacggcacgctg
gccgagctcaagggctttgagctgaagcgtcgtggggagctgaagctcatcaaggtcttc
caggctgagattttcgaccagttcctgcgcggcgactccctccagggctgctatgacgcc
gtggctggggtggccaaccgctggctggacatgctggacacccagggcacggacctgaca
gacacagagctcgtggacctcatctcggagatgtgtgtcatgtccaagagcctggaggcc
tatgagggccgcaagagctgcgccgtcacctgcgccaatcgcctgagtcagttcctgggg
gacgagcgcatcaaggacaaggcaaggcgcttgggcctggtgtgcaactacgtgatcgcc
cgcaacccttccagcgcacccacgtccggccgcgccatcccggtggccatcttctccacg
gagccggccatcgcgcgcacgtacctgcgccgctgggagcgactgggaagtgccatccag
aagatcatcaccatccctgcagccatgcagctgattcccaaccctgtgcccagggtggcg
cacccggactggctgctgcgcaaggtccgagagaagaccgacacccacaagcagcggcgg
cttgacgccatgctgggtcctgccacggccaagcccagcatcggtctggcaggagcacca
catgcaccagtggaggaggagcagcccagggtccaagggtatcccgtggcgctccgagcg
gcggccctgagctctgaggaggatcctgcgagtggggaggaggcacccagcgaggcctgc
ccctcccgtcacgaaaactacgcccagtggctggaggtcaagaagcggctgtggcgacag
ggcgtggaggcgcgcaagaagcggcgcaccgcggccgagcccaaccaccgacgcggcggc
agggagggcccggcccagaatccggaggcaggcgcagggggtctggccggcatgctgcgg
cagcaggctgcctctgctgcctccctgcactggcaggtggtgggcatcgatcacacagag
caaccaggcgtgtacaaatgctgggccgtcctgggtgggcgcatgcacgccatcccgctc
cgcatcccccgcaccttcttcgccaacctgctggccccacccagccacccactggtggcc
gacatgggggtgctggcgcgccgtgcactgccccacggtgcagccgcagcgaccctggtc
cagatcgtcatggatgaggcgtccttccgagccgagcaggcagcgctgaatgagcgcttg
ctggcgctgcgggccctcagagtctacgaggacaccctgccgcccacatacaacgcctgc
ctgcagttggggtgcgttaccgcgttcaacgccccatcggaggcccggaaccttggctca
ggggtggacctagctgagctgggcatgaagacggtcacagagtgcgattatctggagcct
ggggtcctgcgccacatggcgctgtgccagacttctgatgccggacggggcctgcacctc
ctcatcctccacgtgcctgtcgatcaaaggctgcacatctgggtgatcaacccggcgcca
aggagccaggccgagataaccgagggggcagccacccgggtgtggacggaagccaccgca
gcggtgctggagcgtggagaccaccccgccgggacgctgccgacacagccggccatggac
atctcctatgcacgctcggatgcgcaggcatacaccgcgatcaacagactgctcctgggt
ctcagggaccgagccctgggccccaccctgctcctggtcagctcccccgaggagagcacc
ctgcgccagtccctgcccagcttgcgagactggcccaccacggccgtgtccacccccgcc
caggccgtccccttccccgccctgggctggcagctgcctgccctgcgtgccgcagcgtcc
caggcgctggcctgccccgcctggctggaggcccggctgcaagcagcgcgctacgcgcac
ctccccgtcgcgagcatgggccgagattgggccatcgacgccgccgatgcgctgttcgcg
cgccagctgcgcgccgcggggcacctgctgtgggtcagcacccccgacgcggcgaccgct
ggcggcagcctggcggcgcggccgccggaccgcgcggaggcgctgctgctggaggagcaa
cgcacgcgcaccgaggtcgccgcgccgggcgtgtaccgcacggtgtgctgcgaggtcagg
ctcacccacctggccgtgaacgccgtgctggaggcggccgccctgtcggagttagagggc
acagccctcgtggacgatggcaagggctgcggggccgcctttgtggtcctgcgctccctg
gcccaggcatggctggacgacgcctcccgccactccaacgtgtgcgccgacacgctgctc
ctcaacatgtaccgctggatctgctcgcccgcctcgcgcctccacgaccccgccctgaag
cagacggtgcaatccctgatgcacaagctcctgctgcacctcgtgtcggagctgcggcgg
ctgggggtcacggtggtccacgcggacgcgacctccctcatcctgtgcacggggaaacgc
aacctggccgccgccgtcggctacatcgactacatcctggagacgctgggcaagcgggag
ctgctgcagtacctctccttcacccccacgcgcatgtggcacgccctgctctacaaggac
aggtatgactacattggcattgcggcacgggtgcccgccgtcttcatggatgccctggga
cagaccggatcccttgcagaggcacgcctgctacagacgcatggagagaagctggaggtg
agtgcagaggagctcaacgcccctcgcttcgactaccacttcacactgaaggcacccttc
aagctctccatgcaggacttcttgccgtctgccctgcatgccaccttcatgacgctggta
acagagttcctgtggctcccatggcaagccgccatgcagggactggagaaagggcccagc
cagggaggctcccaggccagcaaggacacctcacagagcctggaggcgcagacgctctgg
ttgcggaccgccttgcccaatcagttcacctccaacctcttgaagtacgtcaagtacata
tcaatgcacgttggagcgaacgatgggatcgaggcccatgctttccccgagcgtgctggg
tctcacctctctccggtgttggtccttcgtcgccaactcctgcgcatggtgcacgtcaag
gagttcagcgccgaggccgtcttccaggatccctgcgccagcctcgtgctgcgtgacgtc
atctgcccgcactgccaggactgccaggatctggacgtgtgcaaggacccccagctgcag
gcccacgactggcgctgcggcgcatgcggcgccccgcgcgaccctgtggaggtggagtcc
gcgctgggcgacgctctgggcacgctgtgtgacgcctccgtgctccaggatctgcagtgc
ctcaagtgccacagcgtggccaccgaacacctgcgcgcccagtgcgaccattgtggcggc
ccgctggcgacctgccggccggccgcggagacactggccagggtgcgggtgttcgagagg
gtggcgcgcttccacggcatgccggtgctggaggagctggctggctgggtgctggcccag
cagggcagcaccgcctga

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