Auxenochlorella protothecoides: F751_0566
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Entry
F751_0566 CDS
T04132
Name
(RefSeq) putative ATP-dependent RNA helicase
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F751_0566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_0566
03012 Translation factors [BR:
apro03012
]
F751_0566
Enzymes [BR:
apro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
F751_0566
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
F751_0566
Translation factors [BR:
apro03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
F751_0566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
Helicase_C
DEAD
OB_NTP_bind
HA2_C
HA2_N
Ank_2
Ank
Ank_4
AAA_16
Ank_5
Ank_3
nSTAND3
ATPase
Rh5
AAA_22
Motif
Other DBs
NCBI-GeneID:
23611957
NCBI-ProteinID:
XP_011398435
UniProt:
A0A087SII5
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MEDMQTDMERIQQAYMEQATRNEKLATALRSDRRCLAELVETIRMSKDDHEAMVTRHYGL
EIALREVEKKREDLHNCMKKEFEQNQALLNDNKEYISLLEETNKKLKSERARGERLSAQL
VSRSKESAEHESRLHSMAKAHEDMCAQRQQLEADAQVLRASIRSIEDSLSRAVESSAKDR
EVQCAEIARLSVEAENLSAKLLESDLKLEAAATSLESMRTEKASLAVTQAQLQEEVCEAM
AKICVLNRQLDAAEAENAAMLAVLEGERLLNQDAVNQAQAELKAGAIRQQELEGCLVQMQ
EQVAGATERTRVGVALDNAQLDVLDLHQRLTLEHAKSEAKEEVWALEVNALEGKLTESRK
LLHIASDEMHTRLRAAMLSFQSKEDTLIHRTAKNLDELHRAHRAELAQVAAQHKQELETL
QANIDVSVQDAMEAKVRTEVLEKLNLQTQLSKAERLAEDKESQLKVQCGETEAARAVAAR
LQARIDGMQVMLSQHKQLLAGIGLAAAEAGKKYVDLGGGDGTESGESEEEHGPDSFLVAV
NPHTLDDPGRDAGAGDLVVEGGMADTLAEVGVVEAVAEAVGVVVDSRLGAAHIAEQLKEF
QHSEETEYKFPPGLSNHDRAVVHAECKKYGFTSKSYGKGDNRAVTVRKTRQRSPGLGAIP
LHLAQPARQALAQHMRDFPSSDASGSGGVAPAGRRRPGSSRPRGAAHTSASMTGEEVAAR
LAAWRAAVARPEAAALQSARAALPMAAHRAELLAAVAAHRVVLVSGETGCGKTTQVPQYL
LEDAWAAGRGCHVLCTQPRRISAVSCAERIAAERGEAPGVNVGYNIRLESCGGRDASLLF
ATNGVLLRMLSSGADALAHVTHLVMDEIHERDRFADFALILVRDVLPANPNLRVVLMSAT
LHADLFSGVCRDAGRVLDYFGGCPMVRVPGFTHPVEDFYLEEVLRLVQYQVPREAQGQRG
GQQHTWHKARPGRGLGLGTVPRAQRAAVQAAVEAAFKDDSDAAFEHLLSTLGLGMDGDGA
VSAHVLDVQHEATGATALMAAAGRGRLETLRLLLAHGADVTARSQDGSSAAGWARMFGHA
DVAAELEQHEQQAAAAAAISQTALAVAQYQSETDIDEVDLDLILRLLQYICGEGPFSNPQ
AQKDAQPGAVLIFLPGWDEISRLKELLERDQAFRRTHSGYLILPLHSMVAPAEQRRVFQR
PPRGVRKLVLATNIAETAITIDDVVVVINAGRLREKGYDPFTGSAWISRASERQRRGRAG
RCQPGTAFHLYTRTRSEALAEFQVPELRRSPLEELALQIKLLEVEGQSLPIAEFLAKAID
PPVPQAIKAARQLLEDIGALDEAEHLTPLGRHLANIPLPPALGKLLLYGAMFKCLDPILT
LACFKAYREPWVLPTAFDARAAAWNLRCQMAEAIGGASDHMACLHAFQCYKDARRNGRER
GFCAQNFISPSTMAMVDGMRGQLASELQRLGFIRDVGEASSSAADLGLVRAVLAAGLYPM
VGRLLPPTSGRAMVMTRRGEKVRIHPSSVNAKMGLKDREADSRGTDVQENRLLVIDDLTR
GDASLYVKACSEVPALALLLVAASVQLTKQEESEDEDSEGEPDDGVGRRATRPAAACLVM
DEWLRFRVDPGLVAPLARLRARLAGAFQCTVQDARGSLSPEHTGASTGV
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatgcagaccgacatggagcgcatccagcaggcctacatggagcaggccacc
cgcaatgagaagctggctacggccttacggagcgaccggaggtgcctggcagagctggtg
gaaaccatcaggatgtccaaggatgaccacgaggctatggtcacaaggcattatgggcta
gagatagccctgagagaagtggagaagaagcgtgaggacctccataactgtatgaagaag
gaatttgagcagaaccaggccctgttgaacgacaacaaggagtacatctccctgctggag
gaaacaaacaagaaactgaagtcagagcgtgcacgtggagagagactgagtgctcaactc
gtgtctcgcagcaaggagtcagccgagcacgagtcgcggctgcatagcatggccaaggca
cacgaagacatgtgcgcccagcgacagcaacttgaggctgatgcccaggtcttgagggcc
agcatcaggagcatcgaggactccctcagcagggccgtcgaatcctctgccaaggacagg
gaggtgcaatgcgcagagatcgcacggctgtcagtggaggctgagaacctttcagccaag
ctgcttgagagtgatctgaagctcgaggcagccgccacaagcctcgaatcaatgcgaacg
gagaaggctagccttgccgtcacacaggcccagcttcaggaggaggtgtgcgaggccatg
gctaagatctgcgtgctaaatcggcagctggacgcggcagaggccgagaatgccgcaatg
ctggctgtgctggagggcgagcgcctcctgaaccaggatgcggtcaaccaggctcaagcc
gagctcaaagccggggcgatccgccagcaggagcttgagggctgcctcgtacagatgcag
gagcaagtggccggtgccacagagagaacgcgggttggggttgccctggataacgcacag
cttgacgtcctggaccttcaccagcgtctcactctggaacatgccaagtctgaggcgaaa
gaggaggtttgggctctagaggtgaacgccctcgaggggaagctaaccgagagccggaag
ctcctgcacatagcatctgacgagatgcacaccaggctgagggctgccatgctgtccttc
cagtccaaggaagacaccctcattcaccgaacggccaagaacctggatgagctgcaccgg
gcacatcgcgctgagcttgcacaggttgcagcacagcacaagcaggagctggagaccctc
caggccaacatcgatgtgtcggtgcaggatgcaatggaggccaaggttcggaccgaggtg
ctggagaagctgaacctgcagacccagctgtccaaggctgagaggttggccgaagacaag
gagtcgcagcttaaggtgcaatgcggggagaccgaagctgcacgtgcagtggccgcccgc
ctgcaggcccgcatcgacggcatgcaggtcatgctgagtcagcacaaacagctcctggcc
ggcatcggcctggcggcggcggaggcgggcaaaaagtatgtggatctgggcgggggggat
ggcacggagagcggggagagcgaggaggagcatggacccgactccttcctggtggcggtt
aacccgcatacgctggatgaccctggcagggacgccggggcgggcgacctcgtggtggag
ggagggatggcggacaccctggccgaggtgggcgtggtggaggcggtcgcagaggcggtg
ggcgtggtggtcgactcccgcctgggagccgcccacattgccgagcagctgaaagagttc
cagcacagcgaggagacagagtacaagttcccgccgggcctgtccaaccacgaccgggcg
gtggtgcatgcagagtgcaagaagtatggcttcaccagcaagtcctacgggaagggggac
aaccgtgcggtgacggtgcgtaagacgcggcagcgctcccccggactgggcgccatccct
ctgcacctggcgcagccggcgcggcaggcgctggcgcagcacatgcgagacttcccgtcc
tccgacgcgtccggctcgggcggggtcgcgcccgccggccgccggcggcccggctcctcg
cggccgcgcggcgcggcgcacacctccgcgtccatgaccggcgaggaggtggcggcgcgc
ctggcggcgtggcgcgccgcggtcgcccgccccgaggccgccgcgctgcagtcggcgcgc
gcagcgctgcccatggccgcacatcgcgcggagctgctggcggcggtggccgcacaccgc
gtggtcctggtcagcggcgagacggggtgtggcaagaccacgcaggtgccgcagtacctg
ctggaggacgcgtgggcggcggggcgcggctgccacgtgctctgcacccagccccgccgc
atctccgccgtgtcctgcgcggagcgcatcgccgcggagcgcggcgaggcccccggggtc
aacgtcgggtacaacatccggctggagagctgcggcgggcgcgacgcctcgctcctcttc
gccaccaacggcgtcctgctgcgcatgctgtcctccggcgccgacgccctggcccacgtc
acgcacctggtcatggacgagatccacgagcgcgaccgcttcgcagactttgcgctcatc
ctcgtccgcgacgtgctgcccgccaatcccaacctccgcgtcgtcctcatgtccgccacc
ctgcacgccgacctcttctcaggcgtgtgtcgtgatgctgggagggttctggactacttt
gggggctgccccatggtgcgcgtgccaggcttcacacatccggtggaggacttttacctg
gaggaggtactgcgcctggtgcagtaccaggtcccccgcgaggcacagggccagcgcggg
ggccagcagcacacctggcacaaggcgaggcccggcaggggtctggggctgggcaccgtc
cccagggcgcagcgcgctgctgtgcaggcggcggtggaggctgcgttcaaggacgacagc
gacgccgccttcgagcacctgctgagcacgctgggcctgggcatggacggggacggcgcc
gtgtccgctcatgttctggacgtccagcacgaggccacaggtgccacggcgctgatggcg
gcggcggggagggggcgcctggagaccctgcgcctgctgctggcgcatggcgccgacgtg
actgcgcgctcccaggacggctcctcggcggcgggctgggccaggatgtttggccacgcc
gacgtggcggccgagctggagcagcacgagcagcaggcagccgccgcggcagccatcagt
cagacggcgctcgccgtcgcccagtaccagtccgagaccgacatcgatgaggtggacctc
gacctcatcctgcggctgctccagtacatctgtggggaagggccattcagcaacccacaa
gcccagaaggacgcccagcccggggccgtgctcatctttcttcccggctgggacgagatc
tcacggctcaaggaactcctggagcgcgatcaggccttccgccggacccacagcggctac
ctcatcctgccactgcactccatggtggcgccggcggagcagcgtcgcgtgtttcagcgg
cccccccgcggcgtccgcaagctcgtcctggccaccaatatcgcagaaaccgccatcacc
atcgacgatgtggtggtggttatcaacgctggccggcttcgtgagaaggggtatgacccc
ttcaccggatcggcgtggatcagccgcgcctcggagcggcaacggcgcggtcgggcgggg
cggtgccagcccggcaccgctttccacctttacacccgcacacggtcggaggcgctggcg
gagttccaggtgcccgagctgcgacggagccccttggaggagctggcgctgcagatcaag
ctgctggaggtcgaggggcagagcctgcccattgccgagttcctggccaaggccatcgac
cctcctgtgccccaggccatcaaggctgcccgccagctccttgaagacattggcgcgctg
gacgaggccgagcacctcacgccgctggggcgccacctggccaacatcccgctgcccccg
gccctgggcaagctgctgctgtatggcgcgatgttcaagtgcctggaccccatcctgacc
ctggcctgcttcaaggcctacagggagccttgggtgctgcccaccgcgtttgacgccagg
gcggctgcctggaacctgcgctgccagatggcagaggccatcgggggtgcgtcggaccac
atggcctgcctccatgccttccagtgctacaaggatgccagaaggaacggaagggagcgc
gggttctgcgcccagaacttcatctcgccctccaccatggccatggtggatgggatgagg
ggccagctggcctcggagctccagcgcctcggattcatcagggacgtgggggaggcgtcc
agctccgccgccgatctcgggctggtccgtgccgtcctggcagcgggcctgtaccccatg
gtggggcggctcctgccgcccacctccggccgtgccatggtgatgacgagacgaggcgaa
aaggtccgcatccaccctagctccgtcaatgccaagatggggttgaaggatcgcgaagca
gacagccgaggcaccgatgtccaggagaacagactgctggtcatcgacgacttgacccgg
ggcgatgcctccctctacgtcaaggcgtgctccgaggtgccggccctggccctgctgctg
gtggccgcctcggtgcagctgacgaagcaggaggaaagcgaggacgaggacagcgagggc
gagcctgacgacggggttggtcgccgggccacgcgccccgcggcggcctgcctggtgatg
gacgagtggctcagattccgcgtcgaccccggcctggtggcgccgctggccaggctccgc
gcgcgactggccggcgcttttcagtgcacggtgcaggatgcgaggggcagcctgagcccc
gagcacacgggtgcgagcacaggggtttag
DBGET
integrated database retrieval system
