Auxenochlorella protothecoides: F751_0638
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Entry
F751_0638 CDS
T04132
Name
(RefSeq) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
apro
Auxenochlorella protothecoides
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apro03009
]
F751_0638
Enzymes [BR:
apro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
F751_0638
Ribosome biogenesis [BR:
apro03009
]
Prokaryotic type
ribosomal protein modification factors
F751_0638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-GeneID:
23612029
NCBI-ProteinID:
XP_011400959
UniProt:
A0A087SQE8
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MATHYKGGLWLSPSPSGTHLRNGDCFRVSLGCPKNTVDSEVMLGNLERSGFSVVDDHESA
DAIVINTCAFVEDAKAESLDAIMEATQLKAEGGAVQRVVVTGCLAQRYADDLAAQLPEVD
LVVGFERYADLAQNLHDVLGEAAGATQTAVQVGSPTFSPFPEETQRHRLTPRHTAYLRVA
EGCNHACTFCAIPGFRGRFRSKPPGLILEEARALVAGGALELNLIAEDTNQYGQDRRGGT
GLAGLLANLAEIPGLRWIRILYAYPSYFTEDLIQEIATNPKVCKYIDIPLQHINNLVLLS
MNRPPADHTLRLLGTLRDCIPDLALRTTFISGFPGESKGAHEELAEFSDSFGFQRGGAFA
YSEEDGTPAAGFPEQIPQEVREERRDELMSIQQRNSIAFAESLVGKEIDVLVDGIGEGGE
LLGRTQWDAPEVDGQVYLLTPLDPGVAPAEVGQMRRCRVVSSCIMDIEAEPIA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccacacattataagggagggctgtggctgtcgccgtcgccctctggcacccacctc
cgaaatggggactgctttcgtgtgtctctgggctgcccgaagaacacggtggacagtgag
gtgatgctgggcaacctggagcgctcgggcttctccgtcgtggacgaccacgagtcggcc
gacgccatcgtcatcaacacctgtgcctttgtcgaggacgccaaggcagagtccctggat
gccatcatggaggccacccagctcaaggcggagggcggcgctgtccagcgagtcgtcgtg
actggctgcctggcccagcggtacgccgatgacctggcagcccagctgcccgaggtggac
ttggtggtggggtttgagcgatatgccgacctggcgcagaacctgcacgacgtcctgggc
gaagcggcgggcgccacgcagaccgcggtgcaggttggcagccccacattttcgcccttt
cccgaggagacgcagcgccaccgcctgacgccccgccacaccgcctacctgcgggtggcg
gaggggtgcaatcacgcgtgcaccttctgcgccatcccaggtttccgggggcgcttcagg
agcaagccgccgggcctgatcctggaggaggcccgggcgctggtcgcggggggcgccctg
gagctcaacctcattgcagaggacaccaatcagtatggccaggatcgccgcggcgggacc
gggttggccggcctgctggcaaacctggccgagatcccggggctcaggtggatccgcatc
ctgtacgcctacccctcctacttcaccgaggacctcatccaggagatcgccaccaacccc
aaggtttgcaagtacatcgacatcccgctgcagcacatcaacaacctggtgttgctgtcc
atgaaccggccgccggcggaccacacgctgcgcctgctgggcacgctgcgggattgcatc
ccggatctcgcgcttcgcaccaccttcatttccgggttccctggggagagcaagggggca
cacgaggagctggcagagttctccgactcatttgggttccagaggggcggcgcctttgcc
tacagcgaggaggatggcacccccgccgctggctttcctgagcagatcccccaggaagtc
agagaggagcggcgggatgagctcatgtccatccagcagaggaacagcattgcgtttgcc
gagagccttgtgggcaaggagattgatgtgctggtggacgggatcggggagggcggggag
ctgctgggcaggacacagtgggacgcccccgaggtagatggccaggtgtacctcctcacc
ccccttgaccccggcgtggcccctgccgaggtcggccagatgcggcggtgcagggtggtg
tcctcctgcatcatggacatcgaggccgaacccattgcctga
DBGET
integrated database retrieval system
