| Entry |
|
|---|
| Name |
(RefSeq) DNA-directed RNA polymerase II subunit 1
|
|---|
| KO |
|
|---|
| Organism |
apro Auxenochlorella protothecoides
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:apro00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F751_1389
09124 Replication and repair
03420 Nucleotide excision repair
F751_1389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:apro03021]
F751_1389
03400 DNA repair and recombination proteins [BR:apro03400]
F751_1389
Enzymes [BR:apro01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F751_1389
Transcription machinery [BR:apro03021]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
F751_1389
DNA repair and recombination proteins [BR:apro03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
F751_1389
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
1554 aa
MSNYESHSTAPVRKVKRLQFGILDPDFIRRYSVAKIETSQNYDKGRPRLGGLSDPRLGTM
DRAFKCTTDGAGVLDCPGYFGHIELAKPMYHVHFVRTVIRVLRCVSYHNSKILLMPDDPK
YKMLLRIRNPERRLHAFTSLCQSKRVCEHTGGPQPIYRLESGTLRVLAEFPAPKASDLDG
APLLESMERKQELTAERALEILRRVSDEDCAALGFDTRYTRPDWMILQALPVPPPPVRPS
VQMDSSARSEDDLTHQLGEILKANLRLARQEEAGAPQHIVSEFALLLQVHVTGYLDNTVP
GLPQAKQRSGRPIKSISQRLKGKEGRLRGNLMGKRVDFSARTVITGDPNLALDELGVPWG
IALTLNFPESVTPHNIERLRALVENGPYPPPGQTGARFIIRDDGSRLDLRFLKTERDRHL
QPGYKVERHMINGDVVIFNRQPSLHKMSMMGHRVRILPYSTFRLNLSVTSPYNADFDGDE
MNMHMVQSHEVRAEIKEIMAVPLNIVSPQANRPVMGIVQDSLLGSRLFTKRDTFLERDLL
MNVLMWLEGWDGVVPTPAILKPRPLWTGKQVFSMFLPRVNLQRRAAWFRDGEPDAMSPVD
AQVIIQDGVVLAGTLCKKTLGASAGGLVHVIWMECGPEAARAFLSQVQFTVNQWLLQHGF
SIGIGDLIADARTMTIINDIMERAKEDVKRLIGKVQSNDLEQQPGRSIMESFENQVNQVL
NKARDDAGNQAQGSLHDTNNVVRMVTAGSKGSFINISQMIACVGQQNVEGKRIPFGFSQR
TLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTASTGYIQRRLV
KAMEDLMLRPQPAPRIPMLWHPQMYDGTVRNAVGEVIQFLYGEDGMEGTAIESQRMDFLR
YTPKRFAAAFAYDLDRAAWAPDWLDPGELEALRADLDARQALDAELAQLAEDQRTLQREV
MRGGEAACNLPVNLKRLIENAQRKFACRPYRPGSTGLSPLVVIAKVRELTEKLRVVGGAD
PLSREAQRNATLLFFCLLRSTLASKRVLAEHKLSPDAFEWLVGEVGTRFMHALTAPGEVV
GTVAAQSIGEPTTQMTLNTFHFAGVSAKNVTLGVPRLTEIINISKNIKTPSLTVHLLGEA
VRDKEAAKAVQCGLEFTTLRRVTAATEIHYDPDPRSTHLAEDAEWVAAYWDLAEGDVDAS
RMSPWLLRIELARDMMVDKKLLLSEVAERINSGFEDELHCLFNDDNADRLILRIRVMADE
GAGKDGGGEGEDDDVFLKKVETSMLSQVRLQGVEGIRKVFLREAKRTRLDEEGGRGFVQD
TEWVLDTEGVNLLEVMCHPDVDFSRTVSNDVIEILQVLGIEAARNALLKELRGVIEFDGS
YVNYRHLSSLVDSMTRRGYFMAITRHGINRDETGPLHQASFEETVEILCRAAAYAEADDM
AGVSENIMLGQLCPVGTGAFGLMLDEAKLADAIELDYAFAEEAAWGGGLTPGRTPLMTPG
RASPSALMSPSQSPFHDSVLFSPAGDVMFSPGGASPGYRCVCWWWVLGGGGWVC |
|---|
| NT seq |
4665 nt +upstreamnt +downstreamnt
atgtccaactatgagagccacagcacggccccagtgcgcaaggtcaagcgcctgcagttc
ggcatcctggaccccgacttcatccgtcggtactccgtggccaagatcgagacctcgcag
aactatgacaagggccggcccaggctgggcggcctgagcgacccccgcctgggcaccatg
gaccgcgccttcaagtgcaccaccgacggcgcgggcgtgctggactgccccggctacttt
gggcacatcgagctggccaagcccatgtaccacgtgcactttgtgcgcacggtgatccgg
gtgttgcgctgcgtcagctaccacaactccaagatcctgctcatgccggacgaccccaag
tacaagatgctgctgcgcatccgcaatccggagcggcgcctgcacgccttcacctcgctg
tgccagagcaagcgggtttgcgagcacacgggcggcccgcagcccatataccggctggag
tccggcacgctgcgcgtgctggcggagttccccgcgcccaaggcctctgacctggacggc
gcgccgctgctggagagcatggagcgcaagcaggagctgacggcggagcgcgcgctggag
atcctgcgccgcgtctccgacgaggactgcgccgcgctggggttcgacacgcgctacacc
cgccccgactggatgatcctgcaggcgctccccgtgccgccgccgccggtgcgcccctcc
gtccagatggactccagcgcgcggtcggaggatgacctcacacaccagctgggcgagatc
ctgaaggccaacctgcgcctggcgcggcaggaggaggccggcgcgccgcagcacatcgtc
tccgagttcgcgctgctcctccaggtgcacgtcacggggtacctggacaacaccgtgccg
gggctgccccaggccaagcagcgcagcgggcgccccatcaagtccatctcccagcggctg
aaggggaaggaggggcgcctgcgcggcaacctgatgggcaagcgcgtcgacttctcggcc
cgcaccgtcatcacgggggaccccaacctcgcgctggacgagctgggcgtgccctggggc
atcgcgctgaccctgaacttcccggagagtgtcacgccgcacaacatcgagcgcctgcgc
gcgctggtggagaacgggccctacccgccccccggccagacgggcgctcgcttcatcatc
cgcgacgacggctcgcgcctcgacctccgcttcctgaagaccgagcgggaccggcacctc
cagcccgggtacaaggtggagcgccacatgatcaacggtgacgtggtcatcttcaaccgc
cagccctccctgcacaagatgtccatgatgggccaccgcgtgcgcatcctgccctactcc
accttccgcctgaacctgagcgtgaccagcccctacaacgccgactttgacggcgacgag
atgaacatgcacatggttcagagccatgaggtccgggccgagatcaaggagatcatggcg
gtgccgctgaacatcgtgtccccccaggccaaccgccccgtcatgggcatcgtccaggac
tcgctgctgggctcgcgcctgttcaccaagcgcgacaccttcctggagcgcgacctgctc
atgaacgtgctgatgtggctggagggctgggacggcgtggtgcccacgcccgccatcctc
aagccgcgcccgctgtggacggggaagcaggtgttctccatgttcctgccgcgcgtgaac
ctgcagcgccgcgccgcctggttccgcgacggcgagccggacgccatgtctcccgtggac
gcccaggtcatcatccaggacggcgtggtgctggcgggcacgctgtgcaagaaaacgctg
ggcgcgtcggcgggggggctggtgcacgtcatctggatggagtgcgggccggaggccgcg
cgcgccttcctctcccaagtccaattcaccgtcaaccagtggctgctgcagcacggcttc
agcatcggcatcggcgacctgattgccgacgcgcgcaccatgaccatcatcaacgacatt
atggagcgggccaaggaggacgtcaagcgcctgatcggcaaggtgcagtccaacgatctg
gagcagcagccggggcgcagcatcatggagtccttcgagaaccaggtcaatcaggtgctg
aacaaggcgcgtgacgacgcggggaaccaggcccagggctcgctccacgacaccaacaac
gtcgtgcgcatggtgaccgcggggagcaagggctccttcatcaacatctcccagatgatt
gcgtgcgttgggcagcagaacgtggagggcaagcgcatcccctttggcttctcccagcgc
actctgccccactttaccaaggacgactttggccccgagtcgcgcggattcgtggagaac
tcctacctgcgcggcctgacgccgcaggagttcttcttccacgccatgggcgggcgtgag
ggattgatcgacacggcggtgaagaccgccagcacgggctacatccagcgccgcctggtg
aaggccatggaggacctgatgctgcgcccccagcctgctcctcgaattcccatgctctgg
cacccgcaaatgtacgacggcacggtgaggaatgcggtgggcgaggtgatccagttcctg
tacggcgaggacggcatggagggcacggccatcgagagccagcgcatggacttcctgcgc
tacacgcccaagcgctttgccgccgccttcgcctacgacctggaccgcgcggcctgggcc
cctgactggctcgaccccggcgagctggaggcgctgcgcgccgacctggacgcgcgccag
gcgctggacgccgagctggcgcagctggccgaggaccagcgcacgctgcagcgcgaggtc
atgcgcggcggcgaggcggcctgcaacctcccggtcaacctcaagcgcctgatcgagaac
gcgcagcgcaagtttgcctgtcggccctacaggccggggtccaccggcctgagcccgctg
gtggtgatcgccaaggtgcgggagctgaccgagaagctgcgcgtcgtggggggcgccgac
ccgctgtctcgcgaggcccagcgcaacgcgacgctgctcttcttctgcctcctgcgctcc
accctggccagcaagcgcgtgctggcggagcacaagctctcccccgacgcctttgagtgg
ctggtgggggaggtgggcaccagattcatgcacgcgctgacggcgcccggggaggtggtg
ggcacggtggcggcgcagagcatcggggagccgaccacgcagatgacgctcaacaccttc
cactttgcgggcgtgtcggccaagaacgtgacgctgggtgtgccgcggctgacggagatc
atcaacatttccaagaacatcaagacccccagcctgacggtgcacctgctgggcgaggcg
gtgcgggacaaggaggcggccaaggcggtgcagtgcggtctggagttcacgacgctgcga
cgcgtgaccgcggccacggagatccactacgaccccgacccgcgctccacccacctggcg
gaggatgcggagtgggtggcggcgtactgggacctggcggagggcgacgtggacgcgtcg
cgcatgtccccctggctgctgcgcatcgagctggcgcgcgacatgatggtggacaagaag
ctgttgctcagcgaggtggcggagcgcatcaactccgggtttgaggatgagctgcactgc
ctgttcaacgacgacaacgcggaccgcctcatcctgcgcatccgcgtcatggccgacgag
ggcgcgggcaaggacggcggcggcgagggcgaggacgatgatgtgttcctgaagaaggtg
gagaccagcatgctgagccaggtgcggctgcagggcgtggagggcatccgcaaggtgttc
ctgcgcgaggccaagcgcacgcgactggacgaggagggcggccgcggcttcgtccaggac
accgagtgggtcctggacaccgaaggcgtgaacctgctggaggtgatgtgccacccggac
gtcgacttcagccgcacggtgagcaacgacgtgatcgagatcctgcaggtgctgggcatc
gaggcggcgcgcaatgcgctgctcaaggagttgcgcggcgtgatcgagttcgacggctcc
tacgtcaactaccgccacctgagctccctggtggactccatgacgcggcgcggctacttc
atggccatcacgcggcacggcatcaaccgcgacgaaaccgggccccttcaccaggcctcc
ttcgaggagacggtggagatcctgtgccgcgccgcggcgtacgcggaggccgacgacatg
gcgggcgtgtcggagaacatcatgctgggccagctctgccccgtgggcacgggggccttt
ggcctcatgctggacgaggccaagctggccgacgccatcgagctggactacgcctttgcc
gaggaggcggcctggggcggcgggctgaccccggggcgcacgccgctcatgaccccgggc
agggcctcgccctccgcgctcatgtcaccctcccagagccccttccacgactccgtcctc
ttctccccggcgggtgacgtcatgttttccccaggaggggccagcccggggtacaggtgt
gtttgctggtggtgggttttggggggagggggatgggtctgctga |
|---|
