Auxenochlorella protothecoides: F751_1476
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Entry
F751_1476 CDS
T04132
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52B
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
apro
Auxenochlorella protothecoides
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_1476
03041 Spliceosome [BR:
apro03041
]
F751_1476
03036 Chromosome and associated proteins [BR:
apro03036
]
F751_1476
Enzymes [BR:
apro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F751_1476
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
F751_1476
mRNA cycle factors
Common to processing body (P body) and stress granule
F751_1476
Spliceosome [BR:
apro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
F751_1476
Chromosome and associated proteins [BR:
apro03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
F751_1476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACCA
DEAD
Helicase_C
Carboxyl_trans
MdcE
Med9
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
23612867
NCBI-ProteinID:
XP_011398758
UniProt:
A0A087SJF8
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MTSWDQQGNYSNGSGAGQGSRGSGYVPPHMRGAGGARCPVDTGLPAPEALDMRSYDPFAE
AEATNKDADELFAGENTGINFDAYEDIPVEATGSNVPEPISTFQDIDMGKELMENVRRCK
YTKPTPVQRYSIPIGMAGRDLMACAQTGSGKTAAFCFPIIAHALHGGFQPGARGRKAFPL
ALVLSPTRELSSQIYDEARKFCYQTGVRPVVVYGGAPQVQQLRELERGCDFLVATPGRLI
DIMDRGRVSLAKIRYLALDEADRMLDMGFEPQIRRIVQGEDMPPVGRRQTLLFSATFPKE
IQRLAADFLHDYVFLAVGRVGSSTELIVQHIEFVPGHEKRQMVLDLVQSLAEGLTLVFVE
TKKGADALEDFLVRNGIPATSIHGDRSQAEREAALRSFRSGRTPVLVATDVAARGLDIPH
VTHVINFDLPADVDDYVHRIGRTGRAGKKGLATAFFSDKDAGMAGKLVELLQETNQEDPP
DLPKARDASGKQGDWFQMLLARFNPISEKASNTAVLDFEKPLVELDHKIREVRKVAEQNG
VDVSSQIKELEARARQLRKETYAKLTPIQRLQVARHPNRPTFLDIALNITDKFVELHGDR
MGLDDPALVCGIASMDETSFMFIGHQKGRNTKENIYRNFGMPQPNGYRKALRFMRMADKF
GFPIITFVDTPGAYAGLKAEELGQGEAIAMNLREMFNFRVPIISIVIGEGGSGGALAIGC
ANRMLIMENAVYYVASPEACAAILWKSRDKAGVATEALKITPRDLVGLGVMDEIVPEPLG
AAHTDPMGAFPAVREAVLRHYRDYVGRSATEIMADRYMKFRHIGVYEEFLVAGGDVEAAR
AQREEAPGAYTKAGTWAPTEADARYIEKCADADEKWEQSLIGKEQWLNPPKVDHPGWLKP
GWTEFVLALEEALEEEEAEAEEGEAGEGAGFEDDSDEEGHDATLSNGARNLAEADAA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacctcttgggaccagcaaggcaactactccaatggctccggcgcaggccagggctct
cggggtagcggttacgtcccgccgcacatgaggggagctggaggtgcgcggtgtcccgtc
gacacagggcttccggcaccggaggcgctcgacatgcgttcttatgacccctttgcggag
gcggaggccaccaacaaggatgctgacgagctgtttgccggcgagaacactggcatcaac
tttgacgcgtacgaggacatccccgtggaggccacggggtccaacgtgccggagcccatc
tccaccttccaggacatcgacatgggcaaggagctgatggagaacgtgcgtcggtgcaag
tacaccaagcccacccccgtccagcgctactccatccccatcggcatggcggggcgcgac
ctgatggcctgcgcacagaccggctccggcaagaccgccgccttctgcttccccatcatc
gcacacgctctgcatggcgggttccagcccggcgcacgcgggcgcaaggccttccccctg
gccctggtgctgtcccccacccgcgagctgtcctcccagatctacgacgaggcgcgcaag
ttctgctaccagaccggggtgcgccccgtggtcgtctacggcggcgcgccgcaggtccag
cagctgcgcgagctggaacgtggctgcgacttcctggtggccacccccggccgcctaatt
gacattatggaccgcggtcgtgtgtccctcgccaagatccggtacctggccctggatgag
gcggaccgcatgctggatatgggattcgagccccagatccggcgcatcgtgcagggtgag
gacatgccccctgtgggccgtcgccagaccctgctcttctctgccaccttccccaaggag
attcagcgtctggccgccgacttcctgcacgactacgttttcctggcggtgggccgcgtc
ggctcctccaccgagctcatcgtgcagcacatcgagtttgtccccgggcacgagaagcgc
cagatggtgctggacctggtgcagtcgctggcggagggcctgaccctggtgtttgtggag
accaagaagggcgctgacgcgctggaggacttcctggtgcgcaacggcatccccgccacc
tccatccacggcgaccgcagccaggcggagcgcgaggccgcgctgcgcagcttccgctcc
ggccgcacgcccgtgctggtggccaccgacgtcgcggcgcgcgggctggacatcccccac
gtcacccatgtcatcaacttcgacctccccgctgacgtagacgactacgtgcaccgcatc
gggcgcacggggcgcgcagggaagaaggggctggccaccgccttcttctctgacaaggac
gcgggcatggcggggaagctggtggagctgctgcaggagaccaatcaggaggaccctccg
gatctgcccaaggcccgtgacgcgagcgggaagcagggggactggttccaaatgctgctg
gcccggttcaacccaatcagcgagaaggccagcaacaccgcggtgctcgatttcgagaaa
cccctcgtagaactggatcacaagattagagaggtgcgcaaggtggctgagcagaacggc
gtggacgtcagctcccagatcaaggagctggaggccagggcccgccagctgcgcaaggag
acgtacgccaagctgacgcccatccagcggctgcaggtggcacgccaccccaaccgcccc
accttcctggacatcgcgctgaacatcaccgacaagtttgtggagctgcacggcgaccgc
atgggcctggacgacccggccctggtctgcggcattgcctccatggacgagacctccttc
atgttcatcgggcaccagaaggggcgcaacaccaaggagaatatctaccgcaactttggc
atgccccagcccaacggctaccggaaggccctgcgcttcatgcgcatggccgataagttt
ggcttccctatcatcacctttgtcgacacgcccggcgcctacgccgggctcaaggccgag
gagcttgggcagggcgaggccatcgcgatgaacctgcgcgagatgttcaacttccgcgtg
cccatcatctccatcgtgatcggggagggcggctccggcggcgcactggccatcggctgc
gccaaccgcatgctgatcatggagaacgcggtgtattacgtggcctcgcctgaggcctgc
gccgcaatcctgtggaagtcgcgggacaaggcgggcgtggccaccgaggccctgaagatt
acgccccgcgacctcgtcggcctcggcgtcatggacgagattgtgccagagcctctgggc
gcagcgcacaccgaccccatgggcgccttccccgcagtgcgcgaggcggtgctgcgccac
taccgtgactacgtgggccggtccgccaccgagatcatggccgacaggtacatgaagttc
cgacacatcggcgtgtacgaggagttcctggtggcagggggcgacgtcgaggccgcgcgc
gcgcagcgggaggaggccccgggagcatacaccaaggcggggacgtgggcgcccacggag
gctgacgcgcggtacatcgagaagtgcgccgacgccgacgagaagtgggagcagtccctg
attggcaaggagcagtggctcaacccacccaaggtggaccacccgggctggctcaaacca
ggctggaccgagttcgtgctggccctggaggaggccctggaggaggaggaggcggaggcg
gaggagggcgaggccggcgagggcgccggcttcgaagacgacagcgacgaggaggggcac
gacgccacgctttccaacggcgcgcgcaacctggccgaggccgacgcggcctga
DBGET
integrated database retrieval system
