Auxenochlorella protothecoides: F751_1984
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Entry
F751_1984 CDS
T04132
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03022
Basal transcription factors
apro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
F751_1984
09124 Replication and repair
03420 Nucleotide excision repair
F751_1984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apro03021
]
F751_1984
03400 DNA repair and recombination proteins [BR:
apro03400
]
F751_1984
Transcription machinery [BR:
apro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
F751_1984
DNA repair and recombination proteins [BR:
apro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
F751_1984
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Auxin_inducible
Motif
Other DBs
NCBI-GeneID:
23613375
NCBI-ProteinID:
XP_011397993
UniProt:
A0A087SHA1
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MDIIEYLESLPTVKVAPLYTSSIICRVILQHLPPLAAQYVARLLLVPEGTSEALISSWPT
REAATAHEVALETLVRLNLFQGYRDKLGQQLYRLHDAFRDHICASGSARTLDVPGLLVAL
GLMSNDGPHHQPRITEAGFKYLLLDTFQQLWTLLRQYAAQVEGTEASLAVVLEFLLQLGS
LGCRPLVLQELPPVEQGLALDMCQLGLLMPSQHGTTRLLLATPLARVLAEGGTQPSGTRG
FVIVETNFRVYAYTSSAVQQAILQFFVRCDVLLPNLFVGSITRESVLEALESGATGDQIV
AYLRQHAHPRVEARVPTVPGVVTDQIRLWDKELRRLQATRSVLYSNFESADLFRRFAEAV
RHLAVYVGQEKQQVVVPAEHHEHCKAEIKALKLELGI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatcgagtacctggaatccctcccgacagtaaaggttgcacccctgtacacc
agttccatcatctgccgggtaatcctgcagcacctgcccccgctagctgctcagtatgtt
gcacggctgctcttggtgccggaggggacatctgaagctttaatctcgtcgtggcccacg
cgggaggctgccactgcccatgaggttgcgctggagacactggtgcggctcaacctgttc
caaggctaccgcgacaagctcggacagcagctgtacaggctgcacgatgctttccgggac
cacatctgcgcctctggctcggccaggaccctggacgtgcctggtctcctggtagccctg
ggcctgatgtccaacgacggccctcatcaccagccccggatcaccgaggctggcttcaag
tacctgctcctcgacacctttcagcagctctggacgctgctacggcagtatgcggcgcag
gtggagggaacagaggcgagcctcgccgtcgtcttggagtttttgctgcagctgggcagc
ctggggtgtcggcccctggtcctgcaagaacttccccccgtggagcaggggctcgcactg
gacatgtgccagctgggtctgctcatgccctcccagcatggcaccacccgcctgctgctg
gcgacgcccttggccagggtgctggcggagggcggcacgcagccctcgggtacccgcggc
tttgtcatcgtcgagactaatttcagggtgtacgcctacacctcctcagcggtgcagcag
gctatccttcagttcttcgtgcgctgcgacgtgctgctgcccaatctgtttgtgggcagc
atcacgcgcgagagcgtgctggaggccctggaaagcggggccacgggcgaccagatcgtg
gcctacctgcgccagcacgcccacccccgcgtggaggcccgggtgcccaccgtgcccggg
gtggtgaccgaccagatccgactgtgggataaggagctgcggcgactgcaggccacgcgc
agcgtcctctacagcaattttgagtcggccgacctgtttcgacgttttgcggaggcggtg
cggcacctggccgtatatgtgggccaggagaagcagcaggtggtggtgcctgcggagcac
catgagcactgcaaagctgagatcaaggcgctcaagctggagctgggcatttag
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