KEGG   Auxenochlorella protothecoides: F751_2184
Entry
F751_2184         CDS       T04132                                 
Name
(RefSeq) putative WD repeat-containing protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    F751_2184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:apro03009]
    F751_2184
Ribosome biogenesis [BR:apro03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    F751_2184
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Utp21 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_VPS8 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SCAP WDR54 Beta-prop_Vps41 Cytochrom_D1 BCAS3_WD40 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 23613575
NCBI-ProteinID: XP_011399535
UniProt: A0A087SLJ3
LinkDB
Position
Unknown
AA seq 950 aa
MALFEPFRAIGHIVDDVPFAVQRRGRETYATVSVGNAWQIYNTAKLTVVLIGPQLPRSIT
ALACAGDVTLAALEGGDIVETRRVHVTGVYRGHTGSVVAMQVLGSTLLTLSTDGTLRAWT
LGERAAPLQTLELGPGFTPSTLAHPDTYLNKVVVGSAEGRLQLWNFSTGTLLHEFRGLGS
GIRVLAPSPALDVIGLGLADGRVVLLDLRHDEVVAEFSNAAGTGASAAGLLGNTAGAAAA
GAPGGGAVTALAFRTGPGVPLLAAGGACGAVTLWDLEKRRLHSVLRDAHDAGVTRLHFFV
GEPRLMSAGRDNAAKQWVLDGADGAPRLLRFRAGHAAPPALVRHYGAGRALLSAGEDRTF
RLFSAVADAQSRELSQRHLERRAKRARVAREELRLPRVVALAAGDARERDWANVVTAHAG
EARAFTWRLAHAVLGEHAHGEAAPRDAVTAVALSACGNFAVVGSADGAVHRYNMQSGLHR
GEYQRQAGGGDAASEATAGRPSPAHDGAVAGLASDGANRWLVSGGEDGALRTWDFKRCGL
TGELGVGAAVQRLACHPASGLVAVAPADLMLRIYDVEAQRLVRRFEGHLDRVTDLQFSED
CRWLLSSSMDGTLRVWDIPGSQLLQVLDMGGVVTSLSLSPAQDLLATTGQGSRGINLWAN
QLIYGAGGDIVPGSRVRHAHLPALALEISAGEGADALATLRDASSSEDEEEGGGAASTPA
LRLEDEVAGAAWAKRTPSGAPAPLAPAMLTLSLLPRSQWQSLAHLDVDGGEEPSPGDGEE
PALAAAAMAAWGGSEDEDAANGDEDVADGDEDAEADADADANAKPRRKHHPQSRAVLGLL
RTLTPVQVDGEVRALTRLAEPGQDGGEGERLVDALLAFLEAQLCAGSCFDLVQALLRLTL
DVHAGAILSSPSLQRRAAGLAAQLRASWQRVDDALNSTRCVLGLLGNLQP
NT seq 2853 nt   +upstreamnt  +downstreamnt
atggccctcttcgaacccttccgggcaatcgggcacatcgtcgacgatgtcccgtttgca
gtccagcggcgcggtcgggaaacgtacgcaaccgtgagcgtcggcaatgcatggcagata
tacaacactgccaagctcacggtagtactcatcggtccccagcttcctcgatcgatcact
gccctggcctgcgccggggacgtgaccctggctgcgttggaggggggcgacatcgtggag
accagacgcgtgcatgtcaccggggtctacaggggccacaccgggtcggtcgtggccatg
caggtcctgggcagcacgctgctcaccctttccaccgacggcaccctgcgtgcctggacc
ctgggggagcgggccgcccccctccagaccctggagctcgggcccggcttcaccccatcc
actctcgcccaccccgacacctacctgaacaaggtggtggtggggtccgcggagggccgc
ctccagctgtggaacttctccacggggaccctgctgcacgagttcaggggcctggggtcc
ggcatccgcgtgctggctcccagccccgcgctcgatgtgatcggcttgggcttggcggat
gggcgcgtggtcctcctggacttacgtcatgacgaggtggtggccgagttcagcaacgcg
gcgggcaccggcgcctccgccgcgggcctgctgggcaacaccgccggcgccgcggcggcc
ggcgcgcccggcggcggagcggtcaccgccctcgccttccgcacgggccccggcgtaccg
ctgctggcggcgggcggcgcctgcggcgcggtcacgctctgggatctggagaagcgccgg
ctgcactccgtgctgcgtgacgcgcacgacgccggggtcacccgcctgcacttctttgtc
ggcgagccgcggctgatgtcggcggggcgcgacaacgcggccaagcagtgggtgctggac
ggcgcggacggcgcgccgcgcctgctccgcttccgcgcgggccacgccgcgccgcccgcg
ctggtgcgccactacggcgcggggcgcgcgctgctcagcgcgggcgaggaccgcaccttc
cgcctgttcagcgccgtcgccgacgcgcagtcgcgcgagctgagccagcgccacctcgag
cgccgcgccaagcgcgcgcgcgtggcgcgcgaggagctgcgcctgccgcgcgtcgtggcg
ctggcggcgggcgacgcgcgcgagcgcgactgggccaacgtggtcaccgcgcacgcgggc
gaggcgcgcgccttcacctggcgcctggcccatgccgtgctgggcgagcacgcgcacggc
gaggccgcaccgcgcgacgcggtgaccgccgtcgcgctctccgcctgcggcaactttgcg
gtggtgggctcggcggacggcgccgtgcaccgctacaacatgcaatccggcctgcaccgc
ggcgagtaccagcgccaggcaggaggcggcgacgcggcgagcgaggccacggcgggccga
ccatcccccgcgcacgacggcgcggtggcgggcctagcgtccgacggcgccaaccgctgg
ctggtcagcggcggggaggacggcgcgctgcgcacctgggacttcaagcggtgcggactg
acgggggagctgggcgtgggggcggcggtgcagaggctggcgtgccacccggcctcgggg
ctggtggccgtagcgccggccgacctcatgctccgcatctacgacgtcgaggcccagcgg
ctggtgaggaggttcgagggccacctcgaccgggtcaccgatctgcagttcagcgaggac
tgccgctggctgctgtccagctccatggatggcacgctccgggtctgggacattccaggc
tcccagctgctccaggtgctggacatggggggagtggtcacctcgctgtccctctccccc
gcccaggacctgctggccaccacggggcagggctcccgtggcatcaacctctgggccaac
cagctgatctacggcgcggggggggacatcgtgccggggtcgcgcgtgcgccacgcccac
ctgcccgcgctggcgctggaaatctcggcgggggagggtgccgacgcgctggccacgctg
cgcgacgcctccagctccgaggacgaggaggaggggggcggcgccgcctcgacaccggcg
ctgcgcctggaggacgaggtggcgggcgcggcgtgggcgaagcgcacgcccagcggcgcg
ccggcgcctctggcgccggccatgctcacgctgagcctgttgccgcgctcgcagtggcag
agcctggcgcacctggatgtggacggcggcgaggagcccagccccggcgacggcgaggag
ccggcgctggccgccgcggccatggccgcctggggcggctcggaggacgaggatgcggcg
aacggggatgaggacgtggcggatggagatgaggacgcggaggccgacgccgatgcggat
gccaacgccaagccacggcgcaagcaccacccccagtcgcgcgccgtgctgggcctgctg
cgcacgctgacccccgtgcaggtggacggcgaggtgcgggcgctgacgcggctggcggag
ccggggcaggacggcggcgagggcgagcgcctggtggacgcgctgttggccttcctggag
gcccagctctgcgctggctcctgctttgacctggtgcaggcactgctgcgcctgacgctg
gacgtgcacgccggcgccatcctttctagcccgtcgctgcagcgccgggcggcggggctg
gccgcgcagctgcgcgccagctggcagcgcgtggacgacgcgctcaactccacacgctgc
gtgctgggcctgctgggcaacctgcagccgtga

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