KEGG   Auxenochlorella protothecoides: F751_2416
Entry
F751_2416         CDS       T04132                                 
Name
(RefSeq) Cirhin
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    F751_2416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:apro03009]
    F751_2416
Ribosome biogenesis [BR:apro03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    F751_2416
SSDB
Motif
Pfam: WD40_Prp19 WD40 ANAPC4_WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 23613807
NCBI-ProteinID: XP_011397586
UniProt: A0A087SG44
LinkDB
Position
Unknown
AA seq 751 aa
MAPPTTPRERRKRKSNASESSAAVTPHAYVALHKSRLADWRPSPISHLAASRDGSLGVAV
REDGDVEFYDLNGPHLIHCIPGEAASALTCSAIVETGEARQDPRVFVSGFSGMISEVDGA
SALPLATDDSYGGAVWALAPAPPRPAAEGLARLAAACEDGAVRLFSVTPGVPGAAYDRAF
PAAAGRVVALAWHPSGASLAAAGVDGAVHLREAATGRELLRISLRTAGAAADLVIWALLF
LPDGTLVVGDSSGQVSFWEGTHGTRLASFTQHSADVLALAASPTGDRVWAAGVDPALALF
ARGADGRWAFLSAKRPHSHDVRALALAAGPGQAREGGILLSGGNDAVLLAHSAPRFLKQH
PAPVQHAPQRPAVATSPAAAPGAAAVAATPPAAALAVCALRGDLDLWALPRAAPDADPGL
APGPERLASISTPAGRHVRAAALSSDGALLAFSDAQRTVCLRVGSAAPGPEAAAPRAGFA
PIPLPAALPAAHLLAFVPGTATLASVSLDGSLHLVDLASTPSAVRAVRAVHDLRHRPWSM
RERQLSAARALEPVAQHLVASPDGRFLALTFRRRIQLINVARGELVAPAPVSSGEAGAPI
VGLAFSCDSSTLLSLTLSGEVCMHSVPGGEVVPGEEHGRKALKAALQQLGGGLQGVSAHP
TLPSVFLLHSSTGVCVLDPRKPPTPEPKRWRRAPGPPPPRPPGSNHRLLQSSDILLDLIF
VSPSDLLVVEQSWSEARRSMPAPLHRHRYGS
NT seq 2256 nt   +upstreamnt  +downstreamnt
atggcgccccccaccacaccccgggagaggaggaaacgaaagtccaatgcctccgagtcc
agtgctgccgtcacgccccatgcatacgttgccctgcacaagtcccgactggcggactgg
cgccccagccccatctctcacctggcagccagccgggacggcagcctgggcgtggccgtg
cgggaggacggggacgtggagttctatgacctcaacggcccccacctcattcactgcatc
cccggcgaggcggcctcggccctgacctgctcggccatagtggagaccggcgaggctcgc
caggacccccgcgtcttcgtctccggcttctccggcatgatctccgaagtagacggcgcc
tccgccctcccgctggccaccgacgactcctacggcggcgcggtctgggcgctggccccc
gccccgccccgccccgccgccgagggcctcgcgcgcctggcggccgcctgcgaggacggc
gcggtgcgcctgttcagcgtgacccccggcgtccccggcgcggcctacgaccgcgccttc
cccgccgcggccggccgcgtggtggccctggcctggcacccctccggcgccagcctggcg
gccgcgggcgtggacggcgcggtgcacctgcgggaggcggccactgggcgcgagctgctg
cgcatctccctgcgcaccgccggcgcggcggccgacctcgtcatctgggccctgctcttc
ctgcccgacggcacgctggtagtgggcgactcctcgggccaggtctccttctgggagggc
acccacggcacccgcctggccagcttcacgcagcacagcgccgacgtgctggcgctggcc
gcttcccccaccggcgaccgcgtgtgggcggcgggagtggaccccgccctggctctcttc
gcgcgcggcgccgacgggcgctgggccttcctctccgccaagcgcccgcacagccacgac
gtgcgcgcgctggcgctggcggccggccccggccaggcccgggagggcggcatcctgctg
tccggcggcaacgacgcggtgctgctggcacactccgcgccgcgcttcctcaagcagcac
cccgcaccggtgcagcacgcgccgcagcgtccggccgtggccaccagccccgccgccgcc
cccggcgccgccgccgtcgccgccaccccccctgcggcagcgctggcggtgtgcgcgctg
cgcggcgacctcgacctctgggccctgccccgggccgcgcccgacgcagatcccggcctc
gcccccggcccggagcgtctggccagcatcagcacgccggcagggcgccacgtgcgcgct
gccgcgctctcctccgacggcgcgctgctggccttctcggatgcgcagcggaccgtatgc
ctgcgcgtgggcagcgctgcaccagggcccgaggccgccgcgccgcgcgcgggctttgcc
cccatccccctgcccgcggcgctgcccgccgcgcacctgctggcctttgtccccggcacc
gccacgttggccagcgtgagcctggacggcagcctgcacctcgtcgatctggcgtcgacc
ccgtcggcagtccgcgccgtgcgcgccgtgcacgatctccgccaccgcccctggtccatg
cgcgagcgccagctgagcgcggcccgggctctggagccggtggcgcaacacctggtcgcc
agccccgacgggaggttcctggcgctcaccttccggcggcgcatccagctgatcaacgtg
gcgcgcggcgagctggtggcgccggcccccgtctcgtcgggcgaggccggcgcgccgatc
gtgggcctcgccttctcctgcgactcctccaccctgctcagcctcacgctgagcggcgag
gtgtgcatgcacagcgtgcccggcggggaggtcgtcccgggggaggagcacggcaggaag
gcgctgaaggcggcgctgcagcagctggggggtggcttgcagggcgtgtctgcccacccc
accctgccctccgtcttcctcctgcactccagcaccggggtgtgcgtgctggacccgcgc
aagcccccgaccccggagcccaagcgctggaggcgcgcgccagggcccccacccccccgc
cctccagggtcaaaccatcgcctgctgcagagcagcgacatcctcctggacttgatcttt
gtttcgccctctgacctcctcgtggtcgagcagtcctggtcggaggcgcggcgcagcatg
ccagcaccccttcacagacaccggtacgggtcctga

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