Auxenochlorella protothecoides: F751_2416
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Entry
F751_2416 CDS
T04132
Name
(RefSeq) Cirhin
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F751_2416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apro03009
]
F751_2416
Ribosome biogenesis [BR:
apro03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
F751_2416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
ANAPC4_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
23613807
NCBI-ProteinID:
XP_011397586
UniProt:
A0A087SG44
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MAPPTTPRERRKRKSNASESSAAVTPHAYVALHKSRLADWRPSPISHLAASRDGSLGVAV
REDGDVEFYDLNGPHLIHCIPGEAASALTCSAIVETGEARQDPRVFVSGFSGMISEVDGA
SALPLATDDSYGGAVWALAPAPPRPAAEGLARLAAACEDGAVRLFSVTPGVPGAAYDRAF
PAAAGRVVALAWHPSGASLAAAGVDGAVHLREAATGRELLRISLRTAGAAADLVIWALLF
LPDGTLVVGDSSGQVSFWEGTHGTRLASFTQHSADVLALAASPTGDRVWAAGVDPALALF
ARGADGRWAFLSAKRPHSHDVRALALAAGPGQAREGGILLSGGNDAVLLAHSAPRFLKQH
PAPVQHAPQRPAVATSPAAAPGAAAVAATPPAAALAVCALRGDLDLWALPRAAPDADPGL
APGPERLASISTPAGRHVRAAALSSDGALLAFSDAQRTVCLRVGSAAPGPEAAAPRAGFA
PIPLPAALPAAHLLAFVPGTATLASVSLDGSLHLVDLASTPSAVRAVRAVHDLRHRPWSM
RERQLSAARALEPVAQHLVASPDGRFLALTFRRRIQLINVARGELVAPAPVSSGEAGAPI
VGLAFSCDSSTLLSLTLSGEVCMHSVPGGEVVPGEEHGRKALKAALQQLGGGLQGVSAHP
TLPSVFLLHSSTGVCVLDPRKPPTPEPKRWRRAPGPPPPRPPGSNHRLLQSSDILLDLIF
VSPSDLLVVEQSWSEARRSMPAPLHRHRYGS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccccaccacaccccgggagaggaggaaacgaaagtccaatgcctccgagtcc
agtgctgccgtcacgccccatgcatacgttgccctgcacaagtcccgactggcggactgg
cgccccagccccatctctcacctggcagccagccgggacggcagcctgggcgtggccgtg
cgggaggacggggacgtggagttctatgacctcaacggcccccacctcattcactgcatc
cccggcgaggcggcctcggccctgacctgctcggccatagtggagaccggcgaggctcgc
caggacccccgcgtcttcgtctccggcttctccggcatgatctccgaagtagacggcgcc
tccgccctcccgctggccaccgacgactcctacggcggcgcggtctgggcgctggccccc
gccccgccccgccccgccgccgagggcctcgcgcgcctggcggccgcctgcgaggacggc
gcggtgcgcctgttcagcgtgacccccggcgtccccggcgcggcctacgaccgcgccttc
cccgccgcggccggccgcgtggtggccctggcctggcacccctccggcgccagcctggcg
gccgcgggcgtggacggcgcggtgcacctgcgggaggcggccactgggcgcgagctgctg
cgcatctccctgcgcaccgccggcgcggcggccgacctcgtcatctgggccctgctcttc
ctgcccgacggcacgctggtagtgggcgactcctcgggccaggtctccttctgggagggc
acccacggcacccgcctggccagcttcacgcagcacagcgccgacgtgctggcgctggcc
gcttcccccaccggcgaccgcgtgtgggcggcgggagtggaccccgccctggctctcttc
gcgcgcggcgccgacgggcgctgggccttcctctccgccaagcgcccgcacagccacgac
gtgcgcgcgctggcgctggcggccggccccggccaggcccgggagggcggcatcctgctg
tccggcggcaacgacgcggtgctgctggcacactccgcgccgcgcttcctcaagcagcac
cccgcaccggtgcagcacgcgccgcagcgtccggccgtggccaccagccccgccgccgcc
cccggcgccgccgccgtcgccgccaccccccctgcggcagcgctggcggtgtgcgcgctg
cgcggcgacctcgacctctgggccctgccccgggccgcgcccgacgcagatcccggcctc
gcccccggcccggagcgtctggccagcatcagcacgccggcagggcgccacgtgcgcgct
gccgcgctctcctccgacggcgcgctgctggccttctcggatgcgcagcggaccgtatgc
ctgcgcgtgggcagcgctgcaccagggcccgaggccgccgcgccgcgcgcgggctttgcc
cccatccccctgcccgcggcgctgcccgccgcgcacctgctggcctttgtccccggcacc
gccacgttggccagcgtgagcctggacggcagcctgcacctcgtcgatctggcgtcgacc
ccgtcggcagtccgcgccgtgcgcgccgtgcacgatctccgccaccgcccctggtccatg
cgcgagcgccagctgagcgcggcccgggctctggagccggtggcgcaacacctggtcgcc
agccccgacgggaggttcctggcgctcaccttccggcggcgcatccagctgatcaacgtg
gcgcgcggcgagctggtggcgccggcccccgtctcgtcgggcgaggccggcgcgccgatc
gtgggcctcgccttctcctgcgactcctccaccctgctcagcctcacgctgagcggcgag
gtgtgcatgcacagcgtgcccggcggggaggtcgtcccgggggaggagcacggcaggaag
gcgctgaaggcggcgctgcagcagctggggggtggcttgcagggcgtgtctgcccacccc
accctgccctccgtcttcctcctgcactccagcaccggggtgtgcgtgctggacccgcgc
aagcccccgaccccggagcccaagcgctggaggcgcgcgccagggcccccacccccccgc
cctccagggtcaaaccatcgcctgctgcagagcagcgacatcctcctggacttgatcttt
gtttcgccctctgacctcctcgtggtcgagcagtcctggtcggaggcgcggcgcagcatg
ccagcaccccttcacagacaccggtacgggtcctga
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