KEGG   Auxenochlorella protothecoides: F751_2613
Entry
F751_2613         CDS       T04132                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    F751_2613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apro03019]
    F751_2613
   03036 Chromosome and associated proteins [BR:apro03036]
    F751_2613
Messenger RNA biogenesis [BR:apro03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     F751_2613
Chromosome and associated proteins [BR:apro03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     F751_2613
    COMPASS/SET1 complex (yeast)
     F751_2613
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 WDR55 EIF3I WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP WD40_RFWD3 WD_LRWD1 WDR90_beta-prop_4th Tricorn_2nd Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 PAC11 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 23614004
NCBI-ProteinID: XP_011398667
UniProt: A0A087SJ67
LinkDB
Position
Unknown
AA seq 312 aa
MEITPEVLSSFGIGKVFKESTDRINSLDFHRTHDLLVTGGDDDAIRLYDTETGTALQALL
SKKYGVKSVCFTHDPSSVIYSSNKGADYALRYHDLHSNRYVRYFRGHGAKVTTLCMSPKS
DNFLSAAEDKQVRLWDLRQPHCQAMLQTPGLPTVAYDEQGLVFCVGAESGVVKLYDARNY
GQGPFAAFTVADEKNGAAVFAVLRFSLDGKYLLAVVEGRIYVMDAFEGTVERKVHSNIPE
GGTALEACLTADGKYVLSGCADRAVRAWSVADGSVVSEWKGHAGVPTCLKWSPRKMLVAS
ACQALALWIPAV
NT seq 939 nt   +upstreamnt  +downstreamnt
atggagatcacgccggaagtgctgtcctctttcgggatagggaaagtgttcaaggaaagt
accgaccgtatcaactccttggacttccaccgcacccacgacctgctggtgacgggtgga
gacgacgatgccatccggctgtatgacacagagaccggcaccgcccttcaggcgctgctc
agcaagaagtatggagtgaagtcggtgtgcttcacacacgatcccagctccgtcatatac
agcagcaacaagggcgcggactatgcgctgcggtaccatgacctccacagcaaccgatat
gtgcgttacttcaggggacatggggccaaggtcaccacgctgtgcatgtccccaaagtcg
gacaacttcctgagcgcggcggaagacaagcaggtgcggctctgggacctgcgccagccc
cactgccaggccatgctgcagacgccaggcctgccgacagtggcctacgatgagcagggc
ctggtcttctgcgtgggcgccgagagcggggtggtcaagctctacgacgcccggaactac
gggcaggggccatttgcagccttcacggtcgcggacgagaagaacggggccgccgtattt
gccgtgctgcgattctcgctggatggcaagtacctgctggcggtggtggagggcaggatc
tacgtcatggacgcgtttgagggcacagtggagcgcaaggtccacagcaatattcccgag
ggcggcacggccctggaggcctgcctcaccgccgacggcaagtatgttctgtcggggtgc
gctgaccgcgcggtgagggcctggagcgtcgccgatggctctgtggtctctgagtggaag
ggccatgctggggtccccacatgtctcaagtggtcaccccgcaagatgctggtggcatct
gcgtgtcaagcccttgcgctgtggatcccggcagtgtag

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