KEGG   Auxenochlorella protothecoides: F751_2623
Entry
F751_2623         CDS       T04132                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    F751_2623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_2623
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     F751_2623
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II ATG17_like
Other DBs
NCBI-GeneID: 23614014
NCBI-ProteinID: XP_011398677
UniProt: A0A087SJ77
LinkDB
Position
Unknown
AA seq 893 aa
MHESRILIGFALPQQAGLVRIFDRKSCLSVHGEVAYALAKHLYRSTAQVSRSGVADNGLP
GVTLSWALLPSTLRYLLIDPGEHSVEFYEGAGTNWSCTKRGSPSLLSDFEAELTRSGDLG
EVPLLAALSLGQTEGLRTVGLAYVDPGARVLRTVEFTDDDHFNHLESALVQLGVRECAVV
KDTASEAGQPGAQSLDLHRAMDDLQRLLLPGTLEQHRHVLEGHHASAALAGVLAFGELLA
DGSGHGKYGLDRLDLGKFMRMDAAAQRALSVMRGRGDVSDTFSLFGLLNRGKTAMGKRLL
RTWLKQPLLDLDTLRMRHDVVEALVGDAELRQALQQMHLRGLPDLEMLSRKLERGKASLS
DLCQLYRASSRLPLIEAVLRAHSGPHASTLMERFADPLALAHDADHLVRFEALLETAIDL
DRIPDEYLIAASYDPGLQEVEVEKLNLEKKIQGLAEEAAQDLGLCLDKTIKLEWHKFANQ
RLRCLRITTKEEKSVRSKLRARYLELETRKDGLKFTNKALKAAAERLQALASEYDSRQST
LVAQVVSVAATFCQVWEQVRSVLAELDVLVAFADVAVTAPRPYVRPSLLPADVIHTQALR
LTAGGRVELVGCRHPCVELQEGVDFIPNDCVMQRGESWFQIITGPNMGGKSTFIRQVGIS
VLLAQVGSWVPCTQASIAVRDAIFARVGAGDSQARGVSTFMAEMLESAAILKGATPASLV
IIDELGRGTSTWDGMGLAWAISEHLMNGIGCPTLFATHFHELTALRGAGGVKNLHVGAAI
DHTSGALTMLYQVEEGSCDKSFGIHVAEFARFPPAIVEAARKAAAAAASDKHQADSEVSA
SKRQKAGSDAALQAALLEFAELPLEGGAESGRAREALTSWQGRAAALLKELEV
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgcacgagtccagaattcttattggttttgcactcccacagcaagctggtctggtccgc
atcttcgaccgcaagtcatgcttgtctgtgcatggagaggtggcctacgcgcttgccaag
cacctgtatcgcagcacagcccaggtgtcccgcagcggtgtggcagacaacggccttcca
ggggtgacactgagctgggccttgctcccctccaccctgcgctacctgttgattgacccc
ggcgagcacagtgtggagttctatgagggggcggggactaactggtcatgcaccaagagg
ggctctcctagcttgttgagtgactttgaggccgagctgactcgatcaggggatcttggg
gaggtccccctcctggccgccctgtctctagggcaaaccgaaggtctacgcacggtgggc
ctggcgtacgttgaccccggggcacgcgtgctgaggacggtcgagttcaccgacgacgac
cacttcaaccacctggagagcgccctggtgcagctgggagtgcgcgagtgcgcggtcgtc
aaggacacggcgtctgaggcggggcagcccggcgcccagtccctggatctgcacagggcc
atggacgacctgcagcgcctgctgctcccgggaaccctggagcagcaccggcatgtgctg
gaggggcaccatgcctccgcggccctggccggcgtgctggcctttggcgagctgctggcc
gacgggtcggggcatggcaagtacggcctggaccggctggacctgggcaagttcatgcgc
atggatgccgccgcccagcgcgcactgagcgtgatgcgggggcggggcgacgtctcagac
accttttcgctatttggactgctaaaccggggcaagaccgccatggggaagcgcctgctc
aggacctggttgaagcagccgctgctcgacctggataccctgaggatgaggcatgatgtg
gtggaggcgctggtgggggatgcggagctgcgccaagcgctgcagcagatgcacctcaga
ggcttgccggacctggagatgctgtcgcggaagctggagcgcggcaaggcctccctcagc
gacctgtgccagctgtaccgcgcctcctcacgtctgcccctgatcgaggccgtcctccgg
gcgcactcagggccacacgcctcgaccctgatggagagattcgccgaccccctggccctg
gcccacgacgccgaccacctcgtgcgtttcgaggcgctgctggagacggcgatcgacctg
gaccgcatcccagatgagtacctcatcgccgccagctacgacccgggtctgcaagaggtg
gaggtggagaagctgaacctggagaagaagatccagggcctggcggaggaggccgcccag
gacctggggctgtgcctggacaagaccatcaagctggagtggcacaagtttgccaaccag
cgcctgcggtgtctcaggatcaccacgaaggaggagaagtcggtccggtccaagctgcgg
gcccgatacctcgagcttgagacccgcaaggatggcctcaagttcaccaacaaggcgctc
aaggcggccgccgagcggctgcaggcactagcatccgagtacgattcgcgccagtcgact
ctcgtggcgcaggtggtgtctgtggcggccaccttctgccaggtgtgggagcaggtgcgc
agcgtactcgctgagctggacgtcctggtggcgtttgcggacgtcgctgtcaccgccccc
aggccctacgtccggccctccctgctgcccgccgacgttatccacacccaggcgctacgc
ctcactgcagggggtcgcgtggagctggtcggctgccggcacccctgtgtggagctgcag
gagggcgtcgattttattccaaacgactgcgtcatgcagcgcggggagagctggttccag
atcatcaccggccccaacatgggtgggaagagcaccttcatccggcaggtcggcatctcg
gtgctgctggcgcaggtggggtcctgggtgccctgcacccaggccagcatcgccgtgcgg
gacgccattttcgcgcgcgtgggcgccggggacagccaggcccgcggcgtctccaccttc
atggccgagatgctggaaagcgcggccatcctcaagggcgccacgccagcctccctggtc
atcatcgacgagcttgggaggggcacatccacttgggacggcatgggtctggcgtgggcc
atctccgagcacctcatgaacggcattggctgccccaccctgtttgccacccacttccac
gagctgacggcgctgcggggggctggcggcgtgaagaacctgcacgtgggcgcggccatc
gaccacacctccggcgcgctcaccatgctgtaccaggtggaggaggggtcctgcgacaag
tctttcggcatccacgtcgcggaattcgccaggttcccccctgccatcgtggaggcggcc
aggaaggcggcggcggctgccgcgtccgataagcaccaggctgacagtgaggtctcggcg
tcaaagcggcagaaggcggggtcggacgcggccctgcaggccgccctgctcgagtttgcc
gagctgcctctggagggcggtgccgagtcaggccgcgcgcgcgaggcgcttaccagctgg
cagggcagggctgcagccctcctgaaggagctggaggtatga

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