Auxenochlorella protothecoides: F751_2623
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Entry
F751_2623 CDS
T04132
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F751_2623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apro03400
]
F751_2623
DNA repair and recombination proteins [BR:
apro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
F751_2623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
ATG17_like
Motif
Other DBs
NCBI-GeneID:
23614014
NCBI-ProteinID:
XP_011398677
UniProt:
A0A087SJ77
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MHESRILIGFALPQQAGLVRIFDRKSCLSVHGEVAYALAKHLYRSTAQVSRSGVADNGLP
GVTLSWALLPSTLRYLLIDPGEHSVEFYEGAGTNWSCTKRGSPSLLSDFEAELTRSGDLG
EVPLLAALSLGQTEGLRTVGLAYVDPGARVLRTVEFTDDDHFNHLESALVQLGVRECAVV
KDTASEAGQPGAQSLDLHRAMDDLQRLLLPGTLEQHRHVLEGHHASAALAGVLAFGELLA
DGSGHGKYGLDRLDLGKFMRMDAAAQRALSVMRGRGDVSDTFSLFGLLNRGKTAMGKRLL
RTWLKQPLLDLDTLRMRHDVVEALVGDAELRQALQQMHLRGLPDLEMLSRKLERGKASLS
DLCQLYRASSRLPLIEAVLRAHSGPHASTLMERFADPLALAHDADHLVRFEALLETAIDL
DRIPDEYLIAASYDPGLQEVEVEKLNLEKKIQGLAEEAAQDLGLCLDKTIKLEWHKFANQ
RLRCLRITTKEEKSVRSKLRARYLELETRKDGLKFTNKALKAAAERLQALASEYDSRQST
LVAQVVSVAATFCQVWEQVRSVLAELDVLVAFADVAVTAPRPYVRPSLLPADVIHTQALR
LTAGGRVELVGCRHPCVELQEGVDFIPNDCVMQRGESWFQIITGPNMGGKSTFIRQVGIS
VLLAQVGSWVPCTQASIAVRDAIFARVGAGDSQARGVSTFMAEMLESAAILKGATPASLV
IIDELGRGTSTWDGMGLAWAISEHLMNGIGCPTLFATHFHELTALRGAGGVKNLHVGAAI
DHTSGALTMLYQVEEGSCDKSFGIHVAEFARFPPAIVEAARKAAAAAASDKHQADSEVSA
SKRQKAGSDAALQAALLEFAELPLEGGAESGRAREALTSWQGRAAALLKELEV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagtccagaattcttattggttttgcactcccacagcaagctggtctggtccgc
atcttcgaccgcaagtcatgcttgtctgtgcatggagaggtggcctacgcgcttgccaag
cacctgtatcgcagcacagcccaggtgtcccgcagcggtgtggcagacaacggccttcca
ggggtgacactgagctgggccttgctcccctccaccctgcgctacctgttgattgacccc
ggcgagcacagtgtggagttctatgagggggcggggactaactggtcatgcaccaagagg
ggctctcctagcttgttgagtgactttgaggccgagctgactcgatcaggggatcttggg
gaggtccccctcctggccgccctgtctctagggcaaaccgaaggtctacgcacggtgggc
ctggcgtacgttgaccccggggcacgcgtgctgaggacggtcgagttcaccgacgacgac
cacttcaaccacctggagagcgccctggtgcagctgggagtgcgcgagtgcgcggtcgtc
aaggacacggcgtctgaggcggggcagcccggcgcccagtccctggatctgcacagggcc
atggacgacctgcagcgcctgctgctcccgggaaccctggagcagcaccggcatgtgctg
gaggggcaccatgcctccgcggccctggccggcgtgctggcctttggcgagctgctggcc
gacgggtcggggcatggcaagtacggcctggaccggctggacctgggcaagttcatgcgc
atggatgccgccgcccagcgcgcactgagcgtgatgcgggggcggggcgacgtctcagac
accttttcgctatttggactgctaaaccggggcaagaccgccatggggaagcgcctgctc
aggacctggttgaagcagccgctgctcgacctggataccctgaggatgaggcatgatgtg
gtggaggcgctggtgggggatgcggagctgcgccaagcgctgcagcagatgcacctcaga
ggcttgccggacctggagatgctgtcgcggaagctggagcgcggcaaggcctccctcagc
gacctgtgccagctgtaccgcgcctcctcacgtctgcccctgatcgaggccgtcctccgg
gcgcactcagggccacacgcctcgaccctgatggagagattcgccgaccccctggccctg
gcccacgacgccgaccacctcgtgcgtttcgaggcgctgctggagacggcgatcgacctg
gaccgcatcccagatgagtacctcatcgccgccagctacgacccgggtctgcaagaggtg
gaggtggagaagctgaacctggagaagaagatccagggcctggcggaggaggccgcccag
gacctggggctgtgcctggacaagaccatcaagctggagtggcacaagtttgccaaccag
cgcctgcggtgtctcaggatcaccacgaaggaggagaagtcggtccggtccaagctgcgg
gcccgatacctcgagcttgagacccgcaaggatggcctcaagttcaccaacaaggcgctc
aaggcggccgccgagcggctgcaggcactagcatccgagtacgattcgcgccagtcgact
ctcgtggcgcaggtggtgtctgtggcggccaccttctgccaggtgtgggagcaggtgcgc
agcgtactcgctgagctggacgtcctggtggcgtttgcggacgtcgctgtcaccgccccc
aggccctacgtccggccctccctgctgcccgccgacgttatccacacccaggcgctacgc
ctcactgcagggggtcgcgtggagctggtcggctgccggcacccctgtgtggagctgcag
gagggcgtcgattttattccaaacgactgcgtcatgcagcgcggggagagctggttccag
atcatcaccggccccaacatgggtgggaagagcaccttcatccggcaggtcggcatctcg
gtgctgctggcgcaggtggggtcctgggtgccctgcacccaggccagcatcgccgtgcgg
gacgccattttcgcgcgcgtgggcgccggggacagccaggcccgcggcgtctccaccttc
atggccgagatgctggaaagcgcggccatcctcaagggcgccacgccagcctccctggtc
atcatcgacgagcttgggaggggcacatccacttgggacggcatgggtctggcgtgggcc
atctccgagcacctcatgaacggcattggctgccccaccctgtttgccacccacttccac
gagctgacggcgctgcggggggctggcggcgtgaagaacctgcacgtgggcgcggccatc
gaccacacctccggcgcgctcaccatgctgtaccaggtggaggaggggtcctgcgacaag
tctttcggcatccacgtcgcggaattcgccaggttcccccctgccatcgtggaggcggcc
aggaaggcggcggcggctgccgcgtccgataagcaccaggctgacagtgaggtctcggcg
tcaaagcggcagaaggcggggtcggacgcggccctgcaggccgccctgctcgagtttgcc
gagctgcctctggagggcggtgccgagtcaggccgcgcgcgcgaggcgcttaccagctgg
cagggcagggctgcagccctcctgaaggagctggaggtatga
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