Auxenochlorella protothecoides: F751_2774
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Entry
F751_2774 CDS
T04132
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
apro
Auxenochlorella protothecoides
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apro03041
]
F751_2774
03016 Transfer RNA biogenesis [BR:
apro03016
]
F751_2774
Enzymes [BR:
apro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F751_2774
Spliceosome [BR:
apro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
F751_2774
Transfer RNA biogenesis [BR:
apro03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
F751_2774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Motif
Other DBs
NCBI-GeneID:
23614165
NCBI-ProteinID:
XP_011400770
UniProt:
A0A087SPX9
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MSAFEELGVSPELIRAVEELGWTRKPSPSILGGGDIMAAAETGSGKTGAFALPVLQVVQE
VRAGLMRTGAPTAGRGAATDPAPAAAVWNAADRDDALAIQPDGLVCQSRSEAAWSGVRAS
LGADPASGPRYFEVAVCDEGLCRVGWAAPASSLELGTEKGSWGYGGTGRRSHAGAFEPYG
RPYGLGDVVGAALDWQARRLSFFLNGKDLGVAYDLPKHLATPLFPAVTLKNAELAANFGA
EAWKFPPPPGYQGFLPGGSIGEGLVSWEVASAPAQAGSNAARRPLALILEPTRELAEQTH
DNLGLFSKFLPVPGVRTALCLGGTNPKAAERALAEGADIVTGTPGRVMEFVESGKLVLDG
IKFFVLDEAGKDLERPCLVPDRLLDTGNQEAIRKLFRRFPKAGAGVARLQVLLFSATLHS
EEVRALARELCQDPILVDLRGKNHLPDTVDHLVLEVDPREDRSWLQTSPAVISDGCHTFD
ATGTDLDTPENWSEAVKRLKPRLLQRCLTALGMEQALIFCRTNHDCDNLEKFFKNLSGGA
AAGGGPGNPYSCAVLAGQRSMEERRAALAAFKAGEVRFLVATDVAARGIDIQGLPFVINM
TLPERAEDYVHRVGRVGRADALGLAVSLVSALPEKVWYASGKGQRPWLAPSRQNTATNDR
PGGQTVWLDEPGLLRDVEERLGAAVPRLPADMALPADIAARLGRGPQAYGGGGADADPAA
QEALGRRLAAVQPALAALAKLERDAQASFFDLKRKWAEVEAVRGRMQTVPLGE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttttgaggagctgggcgtgtcgcccgagctcattcgtgctgtggaggagctg
ggatggacgcggaagccgtccccctcgatcctgggagggggcgacatcatggccgccgcg
gagacggggagcggcaagacgggagcctttgcgctgcccgtgctgcaggtggtccaggag
gtccgggccgggctcatgcgcaccggcgcgccgactgcggggcgcggcgcagccactgac
ccagcgcccgccgccgccgtctggaacgcggcggaccgcgacgacgcgctggccatccag
cccgacggcctggtctgccagtcccgcagcgaggcggcttggagcggggtgcgcgcctcg
ctgggcgccgaccccgcgtccggtccccgctacttcgaggtcgcggtgtgcgacgaaggc
ctgtgccgggtgggttgggccgcgccggcctcctccctggagctgggcacggagaagggg
tcctggggctacggcggcacgggccggcgcagccacgcgggcgcctttgagccctatggc
aggccctacggcctgggcgacgtggtgggcgctgcgctggactggcaggcgcggcgcctc
tccttcttcctcaacggcaaggacctgggcgtcgcgtacgacctgcccaagcacctggca
acgcccctgttcccggccgtcacgctgaagaacgccgagctggcggccaactttggcgcg
gaggcctggaagtttcccccgcccccgggctaccagggcttcctgcccggcggcagcatc
ggggagggcctggtctcctgggaggtggccagcgccccagcgcaggcgggctccaatgcg
gcgcggcggcccctggccctcatcctggagcccacccgcgagctggcggagcagacccac
gacaacctgggcctcttctccaagttcctccctgtgcccggcgtccgcaccgccctgtgc
ctggggggcaccaacccaaaggccgccgagcgggcgctggccgagggggccgacatcgtg
actggcacgcctgggcgtgtgatggaattcgtggagagcgggaagctggtcctggacggc
atcaagttttttgtcctggatgaggcaggcaaggacttggaaaggccttgccttgtccca
gatcgcctgctggacacggggaaccaggaagccatccggaagctgttccgccgctttccc
aaggcgggggctggcgtggcgcgcctgcaggtcctgctcttctctgccacgctccactca
gaggaggtcagggcactggcgcgggagctgtgccaggacccgatcctggtggaccttcgg
ggcaagaaccacctgccggacacggtggatcacttggtgctggaggtggacccgcgggag
gaccgctcctggctgcagacctcccccgccgtgatcagcgacggctgccacacctttgac
gcgacgggcaccgacctggacacccccgagaactggtccgaggccgtgaagcggctgaag
ccccgcctgctgcagcgctgcctcacggctctgggcatggagcaggcgctcatcttctgc
cggaccaatcatgactgcgacaacctagagaagttcttcaagaacctgagcggtggtgcc
gcagcaggcggcggccccggcaacccctactcctgcgcggtgctggcgggccagcgcagc
atggaggagcggcgggcggccctcgccgccttcaaggccggggaggttcgtttcctggtc
gccaccgacgtggccgcgcgtggcatcgacatccagggcctgcccttcgtgatcaacatg
acgctgccggagcgggcagaggactacgtgcacagggttgggcgggtggggcgtgctgat
gcactcggcctggccgtctccctggtctcggccctgcccgagaaggtgtggtacgccagc
ggcaagggccagcggccctggctggcacccagccgccagaacacggcgaccaacgaccgg
ccgggggggcagacggtgtggctggacgagcccggcctgctccgcgacgtggaggagagg
ctgggcgcggccgtgccgcgcctgccggccgacatggccctgcctgccgacatcgcggcg
cggctgggcaggggcccgcaggcctacggcgggggcggcgccgacgccgacccggcggcc
caagaggcgctgggccggcgcctggcggcggtgcagccggccctggccgcgctggcaaaa
ctggagcgggacgcgcaggccagcttcttcgacttgaagcgcaagtgggccgaggtggag
gcggtgcgcggccgcatgcagaccgtcccgctgggagagtga
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