Auxenochlorella protothecoides: F751_2924
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Entry
F751_2924 CDS
T04132
Name
(RefSeq) Putative transcription elongation factor SPT5-like protein 1
KO
K15172
transcription elongation factor SPT5
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
F751_2924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apro03021
]
F751_2924
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_2924
Transcription machinery [BR:
apro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
F751_2924
RNA polymerase I system
F751_2924
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
F751_2924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
Spt5-NGN
KOWx_SPT5
KOW1_SPT5
Spt5_N
KOW
KOW7_SPT5
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
23614315
NCBI-ProteinID:
XP_011395598
UniProt:
A0A087SAH9
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MVPVKSVCLLIHAQEPEAEEDEEDEEEDGLGRHRSAARKRGKAAAFIDDVADEDDEEDEE
ASRQQKRSRFIDDIAEVDDDDEDDELEEEGLDDLIDDAGEHVHDAADMIAMRRQMREAEM
QAAKDEEMNPEELQAYLKDRYGGQSHYPGTGGAGTEDFGAVAQQALLPKPSDPKLWVVRC
AEGAEREVVVCLLQKCYDLAQKGRSLLIKSAFCQDHLKVGVAAVRKPAQPAISPHMQRGY
LYVEAVKEAHVAEAVRGMRAVFNSKKPRMVPLGEMTAAVAVQVTAARGVDVGSWVRAKAG
LYKGDLAQVVDLDASGARATLRLVPRLDLAALSARRPEDARANFGRAPRVRPAAKAFSPD
EARQYKTLDVLTQRDRTTGQLVHVLNGSQRFSEGYLIKSVAVKGLALEDGLPPLDDLQRF
QAAAQGGGGGGAGDRAGAADLAGLVQSLTTEGEGQGGAAPTRFAKGDLVLVVQGDLAGIR
GRVEAFGEDGLLMVAPTDSKLPGFTELIGLHPREIQKHFESGSHVKVEHGQHMGETGMVV
TVTGPIATIFTDVSRQEIRVFVKDLVQAVAVTSSVDTIGGYELHDLVALDATTVGVIVGV
ERDACRVLTNQGRPEKPDVRVALLPDLKRKLNNRKAGAQDGARNEVAVGDIVEVVDGPLR
GKNGTVRYVVRGFLFLQSRQIPDHGGYVCVQARHCRVRGGRKPALTKTPAYDPAWAATPA
HPGFAAPSPYHLPGSPGRGPTPGMRYHIDTPGSGHLAPTPGSYLPTPGMAPSPFSPAPAL
TPGLAATPGLSYEAVLLPGGEARGAVHEVDAAGLLARVAPGRQGDGGAWGYEGAEASVEV
PVRDLQAVTPARTDTVKGDGGAWGYEGAEASVEVPVRDLQAVTPARTDTVKLLRGDLAGR
VGELVGTDGGDGIVKLGPEIKIWELAHVGRVVLPAA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggtgccagtaaagtctgtctgtctcctcatccatgcacaggagcctgaggctgaagag
gacgaggaagacgaggaggaggatggcctcgggcgccacaggagcgctgcgcggaagagg
ggcaaggccgcggccttcatcgatgatgtggcggatgaagacgacgaagaggatgaggaa
gcctccaggcaacagaagaggagtcgcttcattgatgacattgccgaggtggatgacgac
gacgaggacgacgagctggaggaggagggcctggatgacctcatcgacgacgcgggtgaa
cacgtgcacgacgccgctgacatgattgccatgcgccgccagatgcgcgaggcggagatg
caggcggccaaggacgaggagatgaatccggaggagctgcaggcctacctgaaggaccgg
tacggcggccagtcacactaccccggcactggcggggcggggacggaggactttggcgcg
gtggcgcagcaggccctgctgcccaagccttcggatcccaagctctgggtggtgcggtgt
gcagagggcgcggagcgcgaggtcgttgtgtgcctcctgcaaaagtgctatgacctggcg
caaaaggggcgctccctgctcatcaagtctgccttctgccaggaccacctcaaggtgggt
gtggctgcggtgcgcaagcccgcgcagccagccatcagcccgcacatgcagcggggctac
ctgtatgtggaggcggtgaaggaggcgcacgtggcggaggcggtgcgtggcatgcgcgcc
gtgttcaactccaagaagccgcgcatggtccccctgggcgagatgacggcggcggtggcg
gtgcaggtgaccgcggcccgcggcgtggacgtcggctcctgggtccgcgccaaggccggg
ctgtacaagggcgacctggcgcaggtggtggacttggacgcctcgggcgcgcgcgccacg
ctgcgcctggtcccgcgcctggacctggccgccctctccgcgcgccggcccgaggacgcg
cgtgccaactttggccgcgcgccgcgtgtgcggccggccgcgaaggccttcagccccgat
gaggctcggcagtacaagacgctggacgtgctgactcagcgcgaccgcaccacgggccag
ctggtgcatgtgctcaacggctcccagcgcttcagcgagggatacctgatcaagagcgtg
gcggtcaagggcctggccctggaggatggcctgcccccactggacgacctccagcgcttc
caggccgcggcgcagggcggcggtggcggcggcgcgggcgaccgcgccggcgccgccgac
ctcgccggcctcgtgcagtcgctgaccactgagggggaggggcagggcggcgccgcgccc
acccgctttgccaagggcgacctcgtcctcgtcgtacagggcgacctggcgggcatccgg
ggccgcgtagaggcctttggcgaggacgggctgctcatggtcgcgcccaccgactccaag
ctccccggcttcaccgagctcatcggcctgcacccgcgcgagatccagaaacactttgag
tctggcagccacgtcaaggtcgagcacggtcagcacatgggcgagacggggatggtggtg
acggtgaccggccccattgccaccatcttcaccgacgtctcgcgccaggagatccgcgtg
ttcgtcaaggacctggtccaggctgtggccgtcaccagcagcgtcgacaccatcggcggc
tacgagctgcacgacctggtggccttggacgcgaccacggtgggcgtgatcgtgggcgtg
gagcgcgacgcctgccgcgtgctgaccaaccaggggcggccggagaagcctgacgtgcgt
gtggcgctcctccccgacctcaagcgcaagctgaacaaccgcaaggcgggggcccaggac
ggagcccggaacgaggtggcggtgggggacatcgtggaggtggtggatggcccgctgcga
ggaaagaacggcacggtacgctacgtcgtgcgcggcttcctgttcctgcagagccgccag
atccccgaccacggcggctacgtctgcgtccaggcgcggcactgccgcgtgcgcggcggg
cgcaagccggcgctgaccaagaccccggcatacgaccccgcctgggcagccacgccggcg
cacccgggctttgccgccccctcgccctaccacctcccggggtcgcccggtcgcggtccc
acgccgggcatgcggtaccacatcgacaccccggggtcggggcacctggcccccacgccg
gggtcatacctgcccacgccgggcatggcgcccagccccttctcgcccgccccggccctc
accccgggcctggcggccacgcccgggctgagctacgaggcggtgctgctgccgggtggc
gaggcgcggggtgcggtgcacgaggtggatgccgcggggctgctcgcgcgcgtcgcgccg
gggcgccagggcgacggcggcgcctggggttacgagggcgcggaggcgagcgtggaggtg
ccggtgagggacttgcaggccgtgaccccggcgcggacagacaccgtcaagggcgacggc
ggcgcctggggttacgagggcgcggaggcgagcgtggaggtgccggtgagggacttgcag
gccgtgaccccggcgcggacagacaccgtcaagctgctgcgcggcgacctggccggccgc
gtgggcgagctggtggggacagacggcggcgacggcatcgtgaagctgggccccgagatc
aagatctgggagctggcgcatgtggggcgcgtcgtcctccccgcggcctga
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