Auxenochlorella protothecoides: F751_3598
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Entry
F751_3598 CDS
T04132
Name
(RefSeq) Exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F751_3598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_3598
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
F751_3598
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
F751_3598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
TRAM
Motif
Other DBs
NCBI-GeneID:
23614989
NCBI-ProteinID:
XP_011398856
UniProt:
A0A087SJQ6
LinkDB
All DBs
Position
Unknown
AA seq
189 aa
AA seq
DB search
MTETCTPGQRLGLVTEFEPGAGTYVAGSFVCASLVGIQRTVPVEETADKRLPRLEVSRST
RPDPVPSPGDVVTARITRLTPRLALADILCVGEHPCAQRYSGVVRIQDVRATEIDSVRLP
AAFRPGDLIRAEVLSLGDARSYFLTTAKNELGVVYAKSIAAGVPMVPLSWQEMQCPTTQS
VESRKVARV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaacttgcaccccaggacagcgcctgggtcttgtgaccgagttcgagccaggc
gcgggaacctacgtcgcaggaagctttgtgtgcgcgtccctggtcggcatccagcgcacc
gtgcccgtcgaggagacagctgacaagcgcctgccccgcctcgaggtctcccgctccacc
cgccccgaccccgtgccatcccccggggacgtggtgaccgcccgcatcacgcgcctgacg
ccccgcctcgccctcgccgacatcctgtgcgtgggtgaacacccctgcgcccagcgctac
agcggcgtggtccgcatccaggacgtgcgcgccaccgagatcgactccgtgcgcctgccc
gccgccttccgcccaggggacctgatccgggccgaggtattgtccctgggcgacgcccgc
tcctacttcctcaccactgccaagaacgagctgggcgtggtctacgccaagagcatcgca
gccggagtgcccatggtcccgctgagctggcaggagatgcagtgccccaccacccaatcc
gtcgagtcccgcaaggtcgcccgcgtctag
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