Auxenochlorella protothecoides: F751_4391
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Entry
F751_4391 CDS
T04132
Name
(RefSeq) putative AAA domain-containing protein C16E9.10c
KO
K14571
ribosome biogenesis ATPase
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F751_4391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apro03009
]
F751_4391
Ribosome biogenesis [BR:
apro03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
F751_4391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
TIP49
AAA_22
AAA_33
AAA_28
NPHP3_N
AAA_14
RNA_helicase
nSTAND3
AAA_18
AAA_17
IstB_IS21
AAA_2
ABC_tran
Mg_chelatase
NACHT
AAA_3
ATPase_2
TsaE
AAA_7
Rad17
Parvo_NS1
ATPase
NB-ARC
AAA_25
AAA_24
Viral_helicase1
Cytidylate_kin2
CPT
Motif
Other DBs
NCBI-GeneID:
23615782
NCBI-ProteinID:
XP_011396382
UniProt:
A0A087SCQ5
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MSARTGLGRLGGSLSEDRALAERLEALLSSLEGSLDLDDLSSSLRDRPGSSKRARVAGGV
RLASALADPRPVFYADLGGIESVLESIKELVERPLRHPEVYDWLGVEPPRGVLLHGPPGC
GKTALANAIANECGVPFFRLSAPEVVSGMSGESEAKLRGVFAEAAAAAPAILFIDEIDAI
APKRESAQREMERRIVAQMLTCMDDLAAAGSGGAPRGSAAAEAGPGMEVDEEVRREPGKH
VVVIGATNRPDAIDAALRRAGRFDREIPLGIPSEEGRARILEVLARPLRLEGSFDFKAIA
KKTPGFVGADLSALMKEAAALAVKRIFAQAGEQDTLTPAELEGLAITMADVESAVGKVQP
SIRNELDFAITQPIANPGIFAAMGLQQGAGVLLYGPPGCGKTLVAKAAAAASGANFISIK
GPELLNKYVGESERAVRQLFARAGAAAPCVLFFDEMDALAPRRGGETSQSSERLVNQLLT
EMDGVDGRTGVYLIAATNRPDIIDPALLRPGRLDKMLYVPLPDAPGRASILRALTRRTPV
GGALDLDALAASQRLEGFSGADLAAVVREACVAALKEGLAAAGLGGLGPNQAGPLVTQRH
LEAAANRNHFSEIIH
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcgtacggggttggggcgcctgggtgggtctctgtcggaggaccgcgccctg
gccgagcgattggaagccctgctgtcctctctggagggcagcttagacctcgacgatctt
tcctccagcttgagagataggccagggtcaagcaagagggctcgggttgctgggggcgtg
cgccttgcctcagccctggccgacccacggcccgtgttctacgctgatctgggcggcatt
gagagcgtgctggaatccatcaaggagctggtggagcgaccattgcgccacccagaggtg
tacgactggctgggggtagaacccccccgcggtgtccttctgcacggccccccgggctgc
ggcaagacggccctggccaacgccattgccaacgagtgcggcgtccccttcttccgcttg
tcagctccggaggtggtcagcggcatgtctggcgagtcggaggccaagctgcggggtgtg
tttgccgaggcggccgcagccgcccccgccatcctcttcatcgacgagatcgacgccata
gcccccaagcgcgagtcggcgcagcgcgagatggagcgccgcatcgtcgcccagatgttg
acgtgcatggacgacctggcggcggccggctccggtggtgcaccccggggttccgccgca
gcagaggccgggccgggcatggaggtcgacgaggaggtccggcgggagcctgggaagcat
gtggtagtcattggcgcgactaaccgacccgatgccatcgacgccgcgctgcgccgcgcc
gggcggtttgatcgggagatcccactcggcatcccctctgaggagggaagggcacgcatt
cttgaggtcctggcgcggccgctgcgactcgagggcagcttcgacttcaaggccatcgcc
aagaagaccccgggcttcgtgggtgccgatctctcggccctgatgaaggaggcggcagcc
ctggccgtgaagcgcatctttgcgcaggcaggggagcaggataccttgacccctgctgag
ctggagggcctggcgatcacgatggcggatgtggagtcagcggtgggcaaggtgcagccg
tctattcggaacgagctggactttgccatcacccagcccatcgccaacccaggcatcttt
gctgccatgggcctgcagcaaggagctggcgtgctgctgtatggtccaccaggctgtgga
aagacgctggtggccaaggcggcggcggcggcgtccggggccaacttcatctccatcaag
ggccccgagctgctcaacaagtacgtgggcgagagcgagcgagccgtccgccagctcttt
gcgcgcgcgggcgccgcggccccctgcgtcctcttcttcgacgagatggacgcgctggcc
ccgcgccgcggcggcgagaccagccagagcagcgagaggcttgtcaaccagttgctgacg
gagatggatggcgtggacggccggacaggggtatacctcatcgccgccaccaaccgcccc
gacatcatcgacccggccctcctccgccccggccgcctggacaagatgctgtacgtgccc
ctgcccgacgccccggggcgcgcctccatcctgcgcgccctgacccgccggaccccggtg
gggggcgccctggacctcgacgcgctggccgcctcccagcggctggagggcttctccggc
gccgatctggcggccgtggtgcgggaggcctgcgtcgcggcgctgaaggagggcctcgca
gctgctggcctggggggtctgggtccaaaccaggcagggccgctggtgacccaaaggcat
ctggaggccgcggccaacaggaaccacttctcggagattatacactga
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