Auxenochlorella protothecoides: F751_4705
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Entry
F751_4705 CDS
T04132
Name
(RefSeq) Small subunit processome component 20-like protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
apro
Auxenochlorella protothecoides
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apro03009
]
F751_4705
Ribosome biogenesis [BR:
apro03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
F751_4705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
23616096
NCBI-ProteinID:
XP_011399108
UniProt:
A0A087SKF8
LinkDB
All DBs
Position
Unknown
AA seq
2270 aa
AA seq
DB search
MSSDSEQEEAPRAKRPRTHVFKTLTQQIQEIEVTVFLSQEYSRTDPLPGFSSFFQENITK
WRELNAAEDFVQAATALTHLTQTLPQLLHNVEPILDILLGRLHITAELSLEPLFVLISTL
ARDLGVEFEPHFPRVMAAYAALVAEGLDRKPESLQHLFSSLSAILKFLSKQLIKKFPAVL
SATAPLRYHAAPHVRRLAAAALAFLLRQMHAQRRLGALTAAVRLVLRQATASGSEARLQA
GAALLFHAARGLGHDLNSHAPEVLLRALRGLETGDADPGRVRGPSGEQEAAGLAGDESVA
AEGLQPDKGDGDPLDRTESTTSPAAQRTLRHAAVVAALLDLLLEHVRRDSAAQLWAALHY
EALLRLEAAQAAPGDDLAALRAAASLGHVAQALAFHGGSRVGDYGPSLDLMARALGISAL
LESEAGRGAALRLAAALVAGHSQAAGASSGPVAYAGMASQWAGLVGSVDDASLLTFWDGI
LNSPAPSEVARAFGPLIVSHLLPLMQPGSPMHDEAWAVAVNLCSRLEEAEDHAPAAPLAE
PVLAALARQELRFLVAAALRAVSELGQDPAALDANAGAALDLLRAFPGDPGEWRAGLREW
LALLGTLRGIRGLHRADDLLQGIVVHVRDSDPAVQQAALLCLKAYKPVALVPYIDRLAGL
TNSRRLRTDLLKFPLAGGTRSARQDDDEIPLLPEHRLEVVPMLTTLLFPHMQKRSGGKAP
QRGAIITYFSGGQPEELAPLLALFLEPLAPTFAALPHQPPPSGHTPLAPLPAWTWALGRT
PGATWLQSLDVAALARQPISRRLGVLNTLSDLLTRLKYQLKEGRGARTLRTQGMRLLAEM
IELSEAGPGGLAFLWPRLMAAAEGWLPRLVPEAAGQEPPALMELAAVLAQRPDLAALLAD
AEWRAEGPGLEAAPAVDAEDPDDHTVAGKHHPRQNSYVLTPRPEAWAADAHVGSRLLEQA
LAARALDLLVVVGQEAATPALACQLTAALLPMLAAPGGKLTEAQLRLVVRALAVLAALWR
RCAVTADAGASAAAPTVAEGSDLLRRLASLDPAGVDDPDYDRRLAAFLSLKARVWRELAE
GEGVDAVPASLVLHRAASDLRNAADLGLRTAAAECLDQFLIAVVEVAGGDATAEDTAGAK
DTCRNADGTAIPSILAPPGSTSPHPLVLAAQRVLFPSLKRGLTAVSQAVRSEHLALMRTL
ALALPRQYPGLAALASREDPEVDFWLNAAHIQLHRRARGLARLARPLREPDALCTLGLGV
MLGVLAPLLQAMVVEGGGSGTAIMLAAGGHEPKAGDVAVTANVTDAAVGALGALGAALPW
TAYSQVLGQALRALRLHADGPAAKPVVRAVCCLLDNFHFLGGEEDGGEASDMEAIHRYLV
KQVIPDLRKHLVVNSETVRAPVALAVVKVLRLLPEDAARAELPRVLQSVANLLSKPLQRI
RDDARAVLVSMAVELGPAYLPFVIDVIMGACPLRGFVAHVRGYTIHAVADMWGELVDARE
ATHFSGAYKEAKRCRAQELYALMWRLAGFETHAGELLALVHQHLDDAGGAKGRARISSLL
AALVRGALANAGADARALIVEAALGVLAGALRRGKVAVRSRETAPLLDPLLPLLVRALRS
RHTPSVSLALATLGLLLQSALPGMEAAVPTAYEEVTRLLNGCPGTDTPLAQECFRLLAGL
LRASSTFQPPRADLQLLLGTRLGDLEDSVGGATFGLLKAVLARRLVVPQVYDAMHRLERL
MVRSQGASVREASAACLLQYLLDYPLAALDMICTVLKKFPDEVVVRWADTALLPLVTRLV
SDASSACRGRAGAALLTLLQRAGPALRATAADFCLQWLTGEDGRLTRAALQLAGVLVEAD
AEAAAGRVPALLPVVGRLVAAGDGKGAEGWQEAYHALLLLEKVHAKLPAALQPGASPAAA
ESWAAAVGALEHPHLWVRRAAGRLILAGLAAPGVRPALLPSPGSAGALGRAFLAQLDGEH
ADEALAKQAVRGLVLLAPAALEDDAAAGRLPTTLWLAKRAPSGLARAGLLAVAGSSVATS
DEVEADEGGGVEEDSNAEAEAKAVSGAEAASSDDEGEENGDAHGGSAAAGTARPGDGYTS
LAALLRGVAALADDRAFTRATARQAALRCLAAVASRLGAEGVLPFLPILLRPLARITEPG
ATGDGEETVGLAREVLDHLRALVGAERMLLAHAAARAGLARQRAQRRAADARRNLVDPEA
AAQMRISKQRRKKSGRAKVVEEQRRHRQAGHSKRGGRGGVAKLGGRGGRR
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggacagcgagcaggaggaggctccgcgcgccaagcggccgcgaacgcacgtc
ttcaaaaccctcacacagcaaattcaggagatcgaggtcacagtgttcctgagccaggag
tactcccgcaccgaccccctgcccggcttctcctccttcttccaagagaatatcaccaag
tggcgggagctgaatgccgccgaggattttgtgcaggcggccaccgccctcacccacctg
acgcagacgctgccccagcttctgcacaatgtcgagccgatcctggacatcctgctcggc
cgtctgcacatcactgccgaactgtccctggagccgctgttcgtcttgatatccacgctg
gccagggacctaggggtcgaatttgagccccactttccccgcgtcatggccgcctacgca
gccctggtcgcggagggcctggacaggaaaccagagtcgctgcagcacctgttctcctcc
ctcagcgccatcctcaagttcctgtccaagcagctgatcaagaagttcccagccgtcctc
tccgccactgcccccctgcgctaccacgccgcgccccacgtgcgccgcctggccgccgcc
gcgctcgctttcctcctgcgccagatgcacgcgcagcgccggctgggcgcgctgaccgcc
gccgtgcgcctggtcctgcgccaggccaccgcgtcggggagcgaggcgcgactgcaggcc
ggcgccgccctgctcttccacgcggcgcggggcctgggccacgacctgaacagccacgcg
ccggaggtcctgctgcgcgctctgcgtgggctggagaccggcgacgccgaccccgggcgc
gtgagggggccgagtggcgagcaggaggccgccggcctggcgggggatgagtccgtggca
gccgagggtctccagcccgataagggtgacggggaccccctcgaccgcactgagtcaacc
acgtccccggcggcgcagcgcacgctgcgccacgccgcggtggtcgccgccctgctggac
ctgctcctggagcatgtgcgacgggatagcgcggcgcagctctgggccgcgctgcactac
gaggcgctgctgcgcctggaggccgcacaggcggcgcccggggacgacctggccgcgctg
cgcgccgccgcatccctgggtcacgtcgcccaggcccttgccttccacggggggtcccgc
gtcggcgactacgggccctccctggacctcatggcgcgcgcgctgggcatctccgccctg
ctggaaagcgaggcggggcggggggcggccctgcgtctcgccgccgccctcgtcgcaggc
cacagccaggcggccggggcctcatcggggcccgtggcctacgcgggcatggcctcccag
tgggcgggcctggtggggagtgtggacgatgcctccctgctgacattctgggacggcatt
ttgaacagcccggcgcccagcgaggtcgctcgggcctttgggccgctcatcgtgtcccac
ctcctgccgctcatgcagcccggtagccccatgcacgacgaagcctgggctgttgcagta
aacctctgctcgaggctggaggaggccgaggaccatgcccctgccgcccctttggcagag
cctgtgctcgccgccctggcgcgccaagagctgcgcttcttggtggcggcggcgctgcgc
gccgtttcagagctgggccaggatccggcggcgctggacgccaacgccggcgcggcgctg
gacctgctccgcgctttcccgggcgacccgggcgagtggcgggccgggctgcgtgagtgg
ctggccctgctgggcacgctgcgcggcatccgcggcctgcaccgcgccgacgacctgctg
cagggcatcgtggtgcacgtccgcgactccgaccccgcagtccagcaggcggcgctgctc
tgcctcaaggcgtacaagccagtggccctggtcccctacatcgatcgcctggccgggctg
accaactccaggcgcctgaggacagacctgctcaaatttccactggcaggagggaccagg
agcgcccgtcaggacgacgacgagatcccgctgctgccggagcaccgcctggaggtggtg
cccatgctcaccaccctgctgttcccccacatgcagaagcgcagtggagggaaggcgcca
caacgtggcgccatcatcacctacttctctgggggccagccggaggagctggcgccgctc
ctggcgctgttcctggagccgctcgccccaacctttgcggccctccctcaccagccgccg
ccgtctggccacacgcccctggcacccctgccagcctggacatgggccctgggccgcacg
cctggcgccacctggctccagtcgctggatgtggccgccctggcccggcagcccatcagc
cggcgcctgggcgtgctcaacaccctcagcgacctcctgacgcggcttaagtaccagctc
aaggagggcaggggtgcgcgcacgctgcgaacccagggcatgcgcctgctggccgagatg
atcgagctgagcgaggccgggccggggggcctggccttcctctggcctcgcctgatggcg
gcggcggagggctggctgccgcgcctggtgccggaggcagcggggcaggagccgcccgcg
ctgatggaactggctgcggttctggctcagcgtcccgacctggccgccctgctcgccgac
gccgagtggagggcggaggggccggggctggaggcggcgccggccgtggacgccgaggac
cctgatgaccacactgttgccggcaagcatcaccctcggcagaactcctacgtgctgacc
ccaaggcccgaggcctgggcggcagacgcccacgtcggctcgcgcctgctggagcaggcc
ctggccgcgcgggcgctggacctgctggtggtggtggggcaggaggccgcgaccccggcg
ctggcctgccagctcaccgccgcgctgctgcccatgctggcggcgcccggcgggaagctg
accgaggcgcagctgaggctggtggtccgcgcactggccgtgctggccgcgctctggcgg
cgctgcgccgtgacagcggacgccggggcctcggctgccgcgccaaccgtcgcagagggc
tccgacttactacgccgcctggcctcgctggaccccgcgggcgtggacgaccccgactac
gaccgccgcctggccgccttcctgagcctcaaggcccgcgtctggcgcgagctggcggag
ggcgaaggtgtcgacgccgtgccggcctcgcttgtgctgcaccgcgcggcatcggacctg
cgcaatgccgccgacctgggcctgcgcaccgccgcggccgagtgtctggaccagttcctc
atcgccgtggtcgaggtggcgggtggcgatgcaaccgccgaggacaccgctggcgccaag
gacacctgcagaaatgctgacggcacggccatcccatccatcctcgcaccgccaggatca
acctcgccgcacccgctggtgctggccgcgcagcgcgtgctcttcccctccttgaagcgg
gggttgacggccgtgtcgcaggcggtgcggtcggagcacctggcgctgatgcgcacgctg
gcgctggcgctgccacgccagtacccgggcctggccgcgctggccagccgggaggacccg
gaggtcgacttctggctcaatgccgcgcacatccagctgcaccggcgcgcgcgggggctg
gcgcgcctggcgcgcccgctgcgcgaacccgacgcgctgtgcacgctgggcctgggcgtc
atgctgggcgtgctggcgcccctcctccaggcgatggtcgtggagggcggcggctcgggc
acggccatcatgctggccgcgggcgggcacgagcccaaggcgggcgacgtggcggtcacc
gccaacgtgaccgacgcggcggttggcgcgctgggcgcgctgggcgcggccctgccctgg
accgcgtactcgcaggtgctggggcaggcgctgcgcgcgctgcgcctccacgccgacggc
ccggccgccaagcccgtggtgcgcgccgtctgctgcctgctggacaacttccacttcctg
ggtggggaggaggacgggggggaagcaagcgacatggaggccatccaccgctacctggtc
aagcaagtcatccccgacctgcgcaagcacctggtggtcaactccgagacggtgcgggcc
ccggtggcgctggcggtggtcaaggttctgcgcctgctgccggaggacgcggcgcgcgcc
gagttgccgcgcgtgctgcagagtgtggcaaacctgctgtccaaaccgctgcagcgcatc
cgcgacgacgcgcgcgctgtgctggtctccatggcggtggagctggggcccgcctacctc
ccctttgtcatcgacgtcatcatgggggcctgcccgctgcgaggatttgtggcgcacgtc
cgcggctacaccatccatgcggtggcggacatgtggggcgagctggtggatgcgcgcgag
gccacccacttctcgggcgcgtacaaggaggcaaagcgctgccgcgcgcaggagctgtac
gcgctgatgtggcgcctggccggctttgaaacccatgcgggggagctgctggcgctggta
caccagcacctggacgacgccggcggcgccaagggccgcgctcgcatctccagcctgctg
gcggcgttggtccggggcgcgctggctaatgccggcgccgacgcgcgcgctctcatcgtg
gaggcggcgctgggcgtgctggcgggcgcgctgcgccggggtaaggtggcggtgcgctcg
cgcgagacggcgccgctgctggacccactgctgccgctgctggtgcgcgcgctgcgcagc
cggcacacgcccagtgtctcgctggcgctggccacgctgggcctgctgctgcagagcgcg
ctgccaggcatggaggccgcggtcccgaccgcgtatgaggaggtgacccgactgctgaac
ggctgccccgggaccgacacccccctggcccaggagtgcttccggctgctggcgggcctg
ctgcgcgccagctccaccttccagccgccacgcgccgacctgcagctgctgctgggcacc
cgcctgggcgacctggaggacagcgtgggcggcgccaccttcggcctgctcaaggccgtg
ctggcgcggcgcctggtggtgccccaggtctacgacgccatgcaccgcctggagcggctg
atggtgcgcagccagggcgcgtcggtacgcgaggccagcgctgcctgcctcctgcagtac
ctcctggactacccgctcgcggcgctggacatgatctgcacggtgctgaagaagttcccg
gacgaggtggttgtgcgctgggctgacaccgccctcctccccctggtcacgcgcctcgtt
tccgatgcctccagcgcctgccgcggcagggccggcgcggcgctgctgacgctgctccag
cgcgcgggccccgccctccgcgccacggctgccgatttctgcctgcagtggctgaccggg
gaggacgggaggctgacgcgtgcggcgctgcagctggcgggcgtgctggtcgaggccgat
gccgaggcggccgccggccgggtgccggccctgctaccggtggtgggccgcttggtggca
gcgggggacggcaagggcgcggagggctggcaggaagcctaccacgccctcctcctcctg
gagaaggtgcacgcaaagctgccggctgcgctgcagcctggcgcctcacccgccgcggcc
gagagctgggccgccgcagtcggcgcgctggagcacccccacttgtgggtgcgccgcgcc
gcggggcgcctgatcctggccggcctggccgcccccggcgttaggcccgccctgctcccc
agcccagggtccgcgggggccctgggccgcgctttcctcgcgcagctggacggcgagcac
gccgacgaggcgctggccaagcaggcggtgcgtgggctggtcttgctggcccctgccgcg
ctcgaggacgacgcggctgccggtcggctgcccaccacgctgtggctggcaaagcgtgcg
cccagcggcctggcgcgcgcggggctgcttgctgtcgctggcagctcggtggcgacgtcc
gatgaggtcgaggccgacgagggcggcggcgtggaggaggacagcaacgccgaggccgag
gccaaggccgtgtccggcgccgaggcggcctccagcgacgacgagggcgaggagaacggc
gacgcgcatggcggctcggctgccgccggcacggcacgacccggcgacggctacacgagc
ctggcggcgctgctgcgtggcgtggcggcgctggccgacgaccgcgcgttcacgcgcgcg
acggcgcggcaggccgcactgcgctgccttgcggcggtggcctcgcgcctgggcgccgag
ggcgtgctccctttcctccccatcctactgcgcccgctggcccgcatcacggagccgggg
gcgacgggggacggggaggagacagtcggcctggcgcgggaggtgctggaccacctgcga
gcgctggtgggcgccgagcggatgctcctggcgcacgccgctgcgcgcgccgggctggcg
cggcaacgcgcacagcgccgcgcggcagacgcgaggaggaacctggtggacccggaggcg
gcggcgcagatgcgcatcagcaagcagcgcaggaagaagtcagggcgcgccaaggttgtt
gaggagcagcgacgccaccgccaggccggacactccaagcgtggcggccgcggcggggtc
gccaagctcggcggccgcggcgggcggcggtga
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integrated database retrieval system
