Auxenochlorella protothecoides: F751_4930
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Entry
F751_4930 CDS
T04132
Name
(RefSeq) Helicase swr1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
F751_4930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apro03036
]
F751_4930
Chromosome and associated proteins [BR:
apro03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
F751_4930
SWR1 complex
F751_4930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Motif
Other DBs
NCBI-GeneID:
23616321
NCBI-ProteinID:
XP_011399817
UniProt:
A0A087SMB5
LinkDB
All DBs
Position
Unknown
AA seq
1917 aa
AA seq
DB search
MASSDDEVHHGSYLGDSQWEDDQSQEDVRDRVVKQAAVIRDMRAATKVARSNKDLESRVL
VRAREEERALRRRAAWIGKEVMSFWEKAGRVVAHRRRTEMDARKKEIMDKQVGAELDFLL
GQTQKYSSMLAERLGTEEGGDLGPAPRCASPAGQAVPREAKTSEYGADSDDADDEATLEE
EEAAALAEGYSRQAEKEEIDGLAADADVPLGQLLAAYGVPVAEQRAAEMDLADLMARYGY
VRPGSGEEWEQEGAAREQEAATRRDAEEGTGRRGTDAAGGAPPQLGAPATAGTQAVSVSG
VDGAVPSSAPAPGHSALATEEEGEGPAGDQTMAGALAAMAQVQPTGHTLDTTHVVTQTPF
LLKGTLREYQHIGLDWLVTLYQKRLNGILADEMGLGKTIQTISLLSHLACEKGDWGPHLV
VVPTSVMLNWEMEFKKWCPAFKLLTYYGSVKERAAKRQGWSKPNAFHVCITSYTLVLQDA
RMFKRKKWKYLILDEAHMIKNWKSQRWQTLLNFNSKRRLLITGTPLQNDLMELWSLMHFL
MPQVFASHAQFKDWFSNPLTGMVEGSAEMNRAIVERLHAVLRPFLLRRLKRDVEKQLPAK
HEHVVYCRLSKRQRQLYEEYMASSGTRATLATGNFLGIINCLMQLRKVCNHPDLFEPRPI
ISAFDMVPGLEFRVPGLVACNLLSLDQSLRQGGPFDALRYGTALWAALATRAAAELAASC
VIGACTESETRSRLLPTQALVSGSLACALGWEPSTAALQAVHAALGQLAARARAWRAGRL
AAMGGLSALRAGAALPPVGVDAEALLRLERPEDVHRLDASRCRHLEVSEFLKEAILLPEA
RLARMEDLLLTFLCYIPKARAPAPTLVCSRPDPSSVVAAAAASRALAQTWYSRGEVLHLA
RTRTSLFFPDKRLIQFDSGKLQELAGLLARLKAGGHRALIFTQMSKMLDVLESFLSLQGH
TYVRLDGATKPEQRQMLMQRFNTDPKIFCFILSTRSGGVGMNLVGADTVIFYDSDWNPAM
DAQAQDRCHRIGQTREVHIYRMISQHTIEENILKKSDQKRQLDFLAIQSGGFTTEMLTKL
DPATLIAETAMGLKVGDPASGHGVSVKEPSSDEVAAAMAAAEDEGDAAAATALAKETAAE
MDEFTKSSAAAASSSSPEAATVDEAAAGTAEAVDEGPLAADWASALRPVERYAVRWLENE
VQAQYTVAEFDIEGMEAAEEEREAEIDEDEEQTLVADWDTGMATEAYRAQVEAAQAEARE
REEAEAAWIQRGKAGASRGGGGSSGEEDTALSPRGRARAGKRERRAAGASLPLVPPPWEV
QEDLVLCLALQHLLSTGHGREESAAAWRLVAHALASGAAATTQAGVGTAVRQGRGRRPED
CAARFAGMAAAAQRGDDAVRRAAAALAEVLRAGWSVHGGEDADGRGPGGPIPWGDGLPPG
DGAAAGSDTPARTVGPSQAAAAAVVVALSAARARQRASGARGLTAVGGALAGLLSGVIAG
QQVSPAVKTEGAGDGGAGTADFPEPGQVESVLAAVRQRCGSGAARVIAGRVPLVVETARM
EGCRAAREALEHAFSRPSSELSRGVASPRAGVAQAAAGPLSSRPRTSLRAGVAAAVAAAT
IPAPSVGPALAQPPGAYTAPRSGPAPAASRPGVQPPRVEAGRQTNASPTSGRLQGGVESH
WHAGPGSPRQWGGAAAPEGGQAGAGGRPGASHPGAWPVLPDGRPPQQWARSSGPQPGPRP
RPLAAPQPGPHPAFSMHPNAGHLLQGGPPAHHYPLGGAPPQASLQGFPTPQTLPGVRPPA
LSSLSPQQLGMLLAHMQAQQAQQARLAALHRAQQARPAPNPGQLPPGYLQWPTQQLQPAH
AQHAVQGQQYAAGVGSGLAGEPRLATGAASGSETLGYTHVPNVGWHPPADPQLNNER
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctcggatgacgaggtccatcatggctcctacctgggtgactcccagtgggag
gacgaccaatcccaggaggacgtacgagacagagtcgtcaagcaagcggcggtcatccgc
gacatgcgggcagccaccaaggtggcgcgctccaacaaggatcttgaatccagggtcctg
gtccgggccagggaggaggagagggcgctgcggcggcgggcggcctggatcggcaaggag
gtcatgtccttttgggaaaaggcgggacgcgtggtcgcccaccgacgtcgcacggagatg
gatgcacgcaagaaggagatcatggacaagcaggttggtgcggagctggatttcctgctg
ggccagactcaaaagtactctagcatgctggcagagaggctggggacagaggagggcgga
gacctgggacctgcgccccgctgcgccagcccggccggccaggcggttccccgggaggcc
aagaccagcgagtatggtgctgactccgacgacgccgacgacgaggcgaccctggaggag
gaggaggcggctgcgctcgctgaaggctacagccgacaggccgagaaggaggagatcgat
gggctggcggcggatgcagatgtgcccctggggcagctgctggcggcgtatggagttcct
gtggctgagcagcgggcggcggagatggacctcgcggatctcatggcgcgttacggctac
gttcggcccgggtcgggggaggagtgggagcaagaaggcgcggcgcgtgagcaggaggca
gccacgaggcgggacgccgaggaagggaccggccggcgaggcacggacgcagctggcggc
gcacccccgcagctcggggccccggcgacggcgggcacgcaagctgtttctgtgtcgggg
gttgatggtgccgtgccttcctctgcccccgcccctggccactctgccctcgccaccgag
gaggagggggagggccccgccggcgaccagaccatggcgggggccctggcggccatggcc
caggtccagcccacgggacacaccctggacaccacccacgtcgtgacccagacccccttc
ctcctcaagggcacgctgcgggagtaccagcacatcggcctggactggctggtcaccctg
tatcagaaacgactcaatggcatcctggcggacgagatggggctgggcaaaaccatccag
accatctccctgctgagccacctcgcctgcgagaagggtgactggggtccgcacctggtg
gtggtgccaacctcggtcatgctgaactgggagatggagttcaagaagtggtgccccgcc
ttcaagctgctcacctactatggcagcgtcaaggagcgggcggccaagcgccagggctgg
tccaagcccaacgccttccacgtctgcatcacctcctacaccctggtcttgcaggatgct
cgcatgttcaagcggaagaagtggaagtacctgatcctggacgaggcgcacatgatcaag
aactggaagagccagcgctggcagaccctgctcaacttcaactccaaacggcgcctgctc
atcaccggcacgccgctgcagaacgacctgatggagctttggagcctcatgcacttcctc
atgccccaggtgtttgcgagccacgcccagttcaaggactggttctccaaccccctgacg
ggaatggtggaggggtctgccgagatgaaccgcgccattgtggagaggctgcacgccgtc
ctccgccccttcctcctgcgccgcctgaagagggacgtggagaagcagctgcccgccaag
cacgagcacgtggtgtactgcaggctgtccaagcgccagcgccagctgtacgaggagtac
atggcctccagcgggacgcgggcgacgctggccaccggcaacttcctgggcatcatcaac
tgcctcatgcagctgcgcaaggtgtgcaatcacccagacctgtttgagcccaggcccatc
atctcagccttcgacatggtgcccgggctggagttccgcgtgcctggcttggtggcgtgt
aacctgctttccttagaccagagtctgcggcaaggggggccctttgacgcccttcgatac
ggcacggccctgtgggcagcgcttgcgacccgtgccgccgccgagctggcggcctcgtgc
gtcatcggtgcctgcaccgagtcggagacgcgctcgagattgctgcccacccaggccctc
gtctccggctccctggcgtgcgccctgggctgggagcccagcaccgcggccctgcaggcg
gtgcatgcagccctggggcagctggcggcgagggcgagggcgtggcgggccgggcgcctg
gccgcgatgggcggcctgtcggcgctgcgcgccggcgccgccctgccgccggtgggcgtc
gacgcggaggcgctgctgcgcctggaaaggcccgaggacgtccacaggctggacgccagc
cgctgtcggcacctggaagtctccgagtttttgaaggaggcgatcctgctcccggaagca
cgcctggcgcggatggaggacctcctcctgaccttcctgtgctacatcccaaaggcgcgg
gccccggcacccaccctggtttgttcccgcccagaccccagctcggttgtcgcagcagcc
gccgcctcccgggccctggcacagacctggtacagcaggggggaggtgctgcacctcgcc
cgcacccgcaccagcctcttcttccctgacaagcggctgatccagttcgactcgggcaag
ctccaggaactggcggggctgctggcgcggctgaaggcgggcggccaccgtgcgctcatc
ttcacccagatgtccaagatgctggatgtgctggagagcttcctcagcctgcagggccac
acctacgtccgcctggacggggccaccaagccggagcagcgccagatgctcatgcagcgc
ttcaacacggatcccaagatattctgtttcatcctttccacccggtcgggtggggtcggc
atgaacctggtgggcgccgacaccgtcatattctacgactcagactggaatccggccatg
gatgcccaggctcaggacaggtgccaccgcatcggacagacccgcgaggtgcacatctac
cgcatgatcagccagcacaccatcgaagagaacatcctgaagaagtctgaccaaaaacgc
cagctcgacttcttggccatccagtctggcggctttaccacagagatgctcaccaagctt
gatcctgccactcttatcgctgagacggcgatgggtctgaaggtgggggatccggcctcc
gggcatggtgtgagcgtcaaggagccatcctctgacgaggtggcggccgccatggccgcc
gccgaggacgagggggatgccgcggcagccactgcgcttgccaaagaaaccgcggcggag
atggacgagttcaccaagtcatctgctgctgctgcctcttcgtcgtcccccgaggcagcc
acggtggacgaggcagccgcaggcacggcggaggcagtagatgaaggacccttggcggcc
gattgggcctctgccttgcgaccggtggagcggtatgccgttcgctggctggagaatgag
gtgcaagcgcagtacacggtggcggagtttgacatcgagggcatggaggccgccgaggag
gaaagggaggcggagattgacgaggatgaggagcagaccctggtcgcggactgggacacg
ggcatggccactgaggcctatcgggcgcaggtggaggcagcccaggccgaggcacgagag
cgggaagaggccgaggcggcctggatacagcggggcaaggccggcgccagtcgcggcggc
ggaggcagcagcggcgaggaggacaccgccctgtcgccgcggggccgggcgcgagctgga
aagcgcgagcggagggcggcgggggccagcctgcccctggtgcccccgccgtgggaggtc
caggaggacctggtgctgtgcctggccctccagcacctgctctcgactgggcatgggcgc
gaagaaagcgcggcggcctggaggctggtggcccatgccctggcctccggggccgccgcc
acgacgcaggctggcgtgggcaccgccgtccgccagggccgcggcaggcgcccggaggac
tgcgcggcgcggttcgcaggcatggccgcagcggcgcagcgcggcgacgatgcggtgcgg
cgcgccgccgcggcgctcgccgaagtgctgagggcggggtggagtgtgcacggcggggag
gatgcggacggccgcgggcccggcgggcccatcccgtggggcgacggtctcccccccggc
gatggcgcggcggcaggcagcgacacgccagcgaggaccgtcggcccgtcgcaggccgcc
gccgccgcggtggtcgtcgcgctctcggccgcccgagcccgacagcgcgcgtcgggtgcg
cggggtctgaccgcggtgggcggcgccctggcgggcctcctgtccggtgtcattgcgggg
cagcaggtcagcccggccgtcaagacggagggtgccggggacggcggtgccggaacggca
gacttcccagagccaggccaggtggagagcgtgctggcggccgtgaggcagcggtgcggg
tcgggggccgcgcgagtcatcgcggggcgggtgccgctggtcgtcgagacggcccgtatg
gaggggtgccgcgctgccagggaggccctggagcacgccttctcccggccgtcctcggag
ctcagccggggggtggcctccccgcgtgcgggggttgcccaggcggctgcagggcccctc
agctcccgaccccggacttcgctgcgcgccggtgtcgctgcagctgtcgctgctgccacc
attcctgcgccctcggtgggcccggctctggcgcagcctcctggagcgtacactgcgccg
aggtcgggccctgcacccgccgcgtcgcggccgggcgtgcagccccctagggtcgaggct
ggccgacagacgaacgcctcgccaacaagcggcaggctccaaggtggtgtggagagccac
tggcacgccgggccgggcagccccaggcagtggggaggtgccgcggcgccggagggtgga
caggcaggcgctggcggtcgcccgggcgcctcacatccgggcgcctggcctgtgctgccc
gatgggcggccgccccaacaatgggcccgatcctcgggcccgcagccggggccccgccct
cggccgctggccgccccgcagccagggccgcacccggccttctccatgcatcccaatgca
gggcatctgctgcagggggggcctccggcccatcattacccactgggcggtgctccgccc
caggccagcctgcagggcttccccacgccccagaccctcccgggcgtgcgcccgccggcc
ctgtccagcctgtccccccagcagctgggcatgctgctggcccacatgcaggcgcagcag
gcacagcaggctcggctcgcggcgctgcaccgtgcccagcaggcccgccccgcgcccaac
ccggggcagctgccgcccggctacctccagtggccgacgcagcagctccagccagcgcac
gcccagcatgcggtgcagggacagcagtacgcagcgggcgtggggtcgggcctggcgggg
gagccacgcctggcgacaggggctgcctcggggagtgagaccttagggtacacacacgtc
ccgaatgtcggttggcaccctcctgcagatccgcagctcaataacgagcggtga
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