Auxenochlorella protothecoides: F751_5137
Help
Entry
F751_5137 CDS
T04132
Name
(RefSeq) ATP-dependent RNA helicase dhx8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
F751_5137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apro03041
]
F751_5137
Enzymes [BR:
apro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
F751_5137
Spliceosome [BR:
apro03041
]
Complex C
Other components
Step II factors
F751_5137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
ABC_tran
AAA_19
HA2_N
AAA_30
AAA_16
nSTAND3
SRP54
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
23616528
NCBI-ProteinID:
XP_011397182
UniProt:
A0A087SEZ1
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MVTANGTAEARKALPVYSARHRLVEVVKTSPCLVLVGETGSGKTTQVPRLLLEAGLAAGG
AIACTQPRRIAAVTVAQRVANEMGCKLGSQVGYCVRFDDRTGPDTRIKYMTDGMLLREAL
LDPLLQRYKVVILDEAHERTVATDVLLGLLKAAAAGRPEGDLRLVVMSATLDTQKLTAYF
QGSQAAYIAGRQYPVQVMYTPAPEESYVDAAITTALQIHCEEGPGDVLVFLTGQDEIEAC
ERLLTDRAASLPPDPARLSLCVLPLYAALPPEAQLRVFERAAPGSRRVVLATNIAETSVT
VPGVRFVVDSGMVKARAYSPRLGADCLQVVPVSQAQARQRSGRAGREGPGKAFRLYTEAA
FAKLAPSTAPEILRTNLSSVVLQLKALGVRDVLGFDFLDPPPAPALVRSLELLLALGALT
REGDLAHPIGTSLARLPVDPMFGRVLMASAELGCSEEALAVIAMASTDPVFQFPREKREE
AAAAHARFASREGDHLTALAVFQRFVAQPRKQAAAWCREGFLNARSLAKARDIHAQLRGH
FQALGLRLASCGDDATPLRQALVMGLFSHAARRQPGGTYRVLATGQDVALHPSSALARAG
GARSGVPAVDAVVFGELVRTTRTYARDVTAIDINWLPQLVPNFFARAAAAGG
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggtgactgcgaatgggaccgcggaggcccgcaaggctctccccgtctactcagcccgc
catcgactggtggaggtggtgaagaccagtccctgcctggtcctggtgggggagacgggg
agtgggaagaccacccaggtccccaggctcctgctcgaggccggcctggcggccggcggc
gcgatagcatgcacgcagccgcgccgaatagcggccgtgacggtggcccagcgagtggcc
aatgagatgggctgcaagctcggcagccaggtggggtactgcgtccgcttcgacgaccgc
acaggccctgataccaggataaagtacatgacggacggcatgctgctgcgtgaagccttg
ttggaccccctgctgcagcgatacaaggttgtcatcctggacgaggcgcacgagcgcacc
gtggccacagacgtgctgctgggcctgctgaaggccgcggcggcgggcaggcccgagggc
gacctgcgcctggtggtcatgtcggccaccctggacacccagaagctgacggcctacttc
cagggctcccaggcggcatacatcgcagggaggcagtacccagtgcaggtcatgtacacc
cctgcgccggaggagagctacgtggacgccgccatcaccaccgccctgcagatccattgc
gaggagggccccggcgacgtcctggtcttcctcaccggccaggatgagatcgaggcgtgc
gagcggctgcttaccgaccgcgccgccagcctcccccctgatcccgcccgcctgtccctc
tgcgtgctgccgctgtacgcggcgctgccccccgaggcccagcttcgcgtcttcgagcgc
gccgcgccggggtcgcgccgcgtcgtgctggccaccaacatcgctgagacgagcgtgacg
gtgccgggcgtgcgcttcgtggtggatagcggcatggtcaaggcgcgggcttactcgccc
cgtctcggcgccgactgcctccaggtcgtgcccgtcagccaggcgcaggcgcgccagcgc
agcggccgtgcaggccgcgagggcccgggcaaggccttccgactttacaccgaggccgcc
ttcgccaagttggcgcccagcacggcgccggagatcctgcgcaccaacctgtccagcgtc
gtgctacagctcaaggcacttggcgtgcgggacgtgctgggcttcgacttcctggacccg
ccgcctgcgcccgcgctcgtgcgctccctggagctcctgctggcgctgggggcgctgacg
cgggagggggacctggcgcaccccatcggcacctccctggcccgcctgccggtggacccc
atgtttggccgggtgctgatggcctcggcggagctggggtgcagcgaagaggcgctggct
gtcatcgccatggcctccaccgaccccgtcttccagttccccagggaaaagcgggaggag
gcggcggccgcccacgcccgcttcgcctccagggagggcgaccatctcaccgccctggcg
gtcttccagcgcttcgtggcccagccgcgcaagcaggcggccgcctggtgccgggagggc
ttcctgaacgcgcggtcgctggccaaggcgcgcgacatccacgcccagcttcgcggccac
tttcaggccctgggcctgaggctggcctcctgcggcgacgacgccacgccgctgcgccag
gccctggtcatgggcctgttttcccacgccgcgcgccggcagccgggcggcacctaccgc
gtgctggcgacggggcaggacgtggcgctgcaccccagcagcgcgctggcgcgggccggt
ggcgcgcgcagcggcgtccccgccgtcgacgcagtggtcttcggggagctggtgcgcacc
acgcggacctacgcccgcgacgtgaccgccatcgacatcaactggctgccccagctggtg
cccaacttcttcgcacgcgccgcggcggcggggggttga
DBGET
integrated database retrieval system
