Auxenochlorella protothecoides: F751_5198
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Entry
F751_5198 CDS
T04132
Name
(RefSeq) putative NOT transcription complex subunit VIP2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F751_5198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_5198
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
F751_5198
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
F751_5198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
23616589
NCBI-ProteinID:
XP_011401099
UniProt:
A0A087SQT3
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MDGRYAQFHAGQGVLPGYGGLPNNMQGLQGLQGAATAGYGLQGQLQGGRSGMPGMNAPVQ
GNQRMAGLGLNPGLAMGLGQNPRVNMAGAQQAQHAAHTQYGMAQRAQHGAPSSWAAWAAA
WAAAWAAVAPRLAARAPTPPTSPCVGFQEEEFPALPGTMARGPAGAQQAALQAMLAGVGP
NTQRGQQSDASSLALGFDLTSLGLSLNSAEPIWKEFGSPWGEPAGKVDAEFKTPACYQHN
PLRLSQAYFSKFQPDTLFYVFYGMPGEDAQVLAAEELTNRGWYFHKELQAWLTMVPGTDP
TQKTDRFERGAFFVFEPATWEVTRKDNFVVHFEHLERAPPLPGRPQPGLQARA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacggtcgctacgcgcagttccacgctggccagggggtgttgccaggctatggtggc
ttgcccaacaacatgcagggcttgcagggcctccagggggccgccacggcgggctacggt
cttcagggtcagctccagggcggcaggtctggcatgcccgggatgaacgcgccggtccag
gggaaccagcgcatggccggcctgggcctgaaccctggcctggccatgggcctgggccag
aacccgcgcgtgaacatggccggggcgcagcaggcacagcatgccgcgcacacgcagtac
ggcatggcccagcgcgcgcagcatggcgcccccagcagctgggcggcctgggcggcggcc
tgggcggccgcatgggcggcggtggcgccgcggctggcggcacgggctcctaccccgcca
acctcgccatgcgtgggcttccaggaggaggagttcccggcgctgcctgggacgatggcg
cgtggccccgctggcgcgcagcaggccgcgctgcaggccatgctggccggcgtggggccc
aacacgcagcgcggccagcagtccgacgcgtcctccctggccctgggcttcgacctcacc
tccctgggcctgagcctgaactctgcggagcccatctggaaggagtttgggtcgccctgg
ggcgagcccgcggggaaggtggacgccgagttcaagacccccgcctgctaccagcacaac
ccgttgaggctgtcccaggcctacttctccaagtttcagccggacacgctgttctacgtg
ttctatggcatgccgggcgaggacgcccaggtcctggccgcggaggagctgaccaacagg
ggctggtacttccacaaggagctccaggcctggctgacgatggtccctggcactgatccc
acccagaaaacggaccggtttgagcggggcgccttcttcgtcttcgagcctgccacctgg
gaggtgacgcgcaaggacaactttgtcgtgcactttgagcacctggagcgagcgcccccg
ctcccgggcaggccgcagcccggcctgcaggccagggcttga
DBGET
integrated database retrieval system
