Auxenochlorella protothecoides: F751_5457
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Entry
F751_5457 CDS
T04132
Name
(RefSeq) Cleavage and polyadenylation specificity factor CPSF30
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
F751_5457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apro03021
]
F751_5457
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_5457
Transcription machinery [BR:
apro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
F751_5457
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
F751_5457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
23616848
NCBI-ProteinID:
XP_011400881
UniProt:
A0A087SQ88
LinkDB
All DBs
Position
Unknown
AA seq
193 aa
AA seq
DB search
MDDIEFDFERSLASQRQQQQQPPSTSRLYENASGGKGTERPRNYRQTVCTYWLRGLCMKG
DACGFLHQFDPARMPVCRNLLKNGVCKDVDCPYKHSMEEIKECNMYKLGFCIYGPACRFK
HTRLAGPPAEPNQLEAAKPKEFRNVSIVADQANRGIHLLGPHGRPRDLNLPALTAGPGTA
PRSRAMVPSGAVR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggacgacatcgagttcgacttcgagaggtcgctggcctctcaacggcaacagcagcag
cagccaccttctaccagcagactctatgagaatgcttcgggagggaagggaacggaacgc
ccgcgtaattacagacagaccgtgtgcacatactggctgcgaggactctgcatgaaaggc
gatgcctgtggtttcctgcaccagtttgacccagcccgcatgccggtgtgccggaacctg
ctgaagaatggggtgtgcaaggatgtggactgcccctacaagcacagcatggaggagatc
aaggagtgcaacatgtacaagctcggattctgtatctacggcccagcgtgccggttcaag
cacacccggctcgcaggcccccccgcggagcccaaccagctggaggccgccaagcccaag
gagtttaggaacgtgagcatcgtggcggatcaggccaaccgcggcatccacttgctggga
ccccacggtcggccgcgggacctcaacctgccggcgctcacggccggcccaggcacggcg
ccgaggtccagggccatggtgccttcgggtgccgttcgatga
DBGET
integrated database retrieval system
