KEGG   Auxenochlorella protothecoides: F751_5662
Entry
F751_5662         CDS       T04132                                 
Name
(RefSeq) putative ubiquitin receptor RAD23a
  KO
K10839  UV excision repair protein RAD23
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03420  Nucleotide excision repair
apro04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    F751_5662
  09124 Replication and repair
   03420 Nucleotide excision repair
    F751_5662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:apro03051]
    F751_5662
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_5662
Proteasome [BR:apro03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    F751_5662
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      F751_5662
SSDB
Motif
Pfam: UBA XPC-binding UBA_7 UBA_9 UBA_RAD5A
Other DBs
NCBI-GeneID: 23617053
NCBI-ProteinID: XP_011400685
UniProt: A0A087SPP4
LinkDB
Position
Unknown
AA seq 241 aa
MKVTVRTVTGRTFQLDFAPETQILKDDATLTGSNVSESGFIVVMVIKEAASQLARGSELE
AKVAAIVDMGFPREEVQRAMRAAFNNPERAVEYLMSGIPAGLGFQMLKAMVQQNPALLQP
MLQELGRNNPALLEQINANQAAFLAMINEPSAAGGADLETLVQQLAGEYEGGEGGGEAMD
EGDVPPGANVVEVHLSPEEVEAVERLVGLGFDRQVCLEAFLICDKNETLAANYLLENGQD
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaggtcaccgtcaggaccgtgacgggcaggaccttccagctggattttgctcccgag
acacagatcctgaaagacgacgccacgctgacggggagcaatgtctccgagtctggcttc
atcgtggtcatggtcatcaaggaggccgcctcccagcttgccaggggctcggagctggag
gccaaggtggccgccatcgtggacatgggcttcccgcgcgaggaggtgcaacgtgccatg
cgcgccgccttcaacaaccccgagcgcgccgtggagtacctcatgtccggcatccctgcc
ggcctggggttccagatgctgaaggccatggtgcagcagaaccccgccctcctccagccc
atgctacaggagctgggccggaacaacccggcgctgctggagcagatcaacgccaaccag
gccgccttcctcgccatgatcaacgagcccagcgcggcggggggcgcggacctggagacc
ctggtgcagcagctggcgggcgagtacgagggcggcgagggcggcggcgaggccatggac
gagggggatgtgccccctggggccaacgtggtggaggtccacctctcgccggaggaggtg
gaggccgtcgagcggctcgtgggcctcggcttcgaccgccaggtgtgtttggaggcgttc
ctcatctgcgacaagaacgagaccctggctgcaaactacctgctggagaacgggcaagac
gcatag

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