KEGG   Auxenochlorella protothecoides: F751_6022
Entry
F751_6022         CDS       T04132                                 
Name
(RefSeq) Pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    F751_6022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:apro03041]
    F751_6022
Spliceosome [BR:apro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    F751_6022
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 23617413
NCBI-ProteinID: XP_011396340
UniProt: A0A087SCL4
LinkDB
Position
Unknown
AA seq 355 aa
MPHHGRALPSPAVSRSSLNRGFYAPDVPLNIVPEVPLDRQERAFEQYGNTSTYNLENVLR
QNILTSTYYQKTAVPIEQWQDLVDEIYYSVDHVEPWMSGNARGPSTAFNLLYRLGQLKPT
PKELRMMLDHKDSPYIRAVGFLYLRYTCNPRYLWEWVKDYLEDAEEFTPSPPGWGHSVTM
GCFLRDILLDQYYFETIFPRIPTKVTDEVLAGLKARGLPCKALGNAGQGGEDRRGIAESA
ARPASVKQSLSVAMGQRAPNRASARELGRGTGADLQLEQVMKRKERASPVRGAERREARS
RSRSPRGAPVARCAGRAAWGLAASCCRGCHPGDVESLMSGSVGASAVRGPMIPPC
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgcctcaccacggtcgagcccttccttcccccgcagtgtcccgatcatcactgaatcgc
ggattctacgcaccagatgtccctctcaacatagtgccggaagtacccctggacagacag
gagcgtgcattcgagcagtatggcaacacctcgacatacaacctggaaaacgtgctgcgg
caaaacatcctgacctccacctactaccagaaaacagccgtccccatcgagcagtggcag
gatctggtggatgaaatctactacagcgtggaccatgtggagccctggatgagcgggaac
gcgcgagggccctccacggccttcaacctgctgtaccgactgggtcaattgaagcccacc
cccaaggagctgcgcatgatgctggaccacaaggactcgccctacatcagagcggtggga
ttcctgtacctgcgctacacatgcaacccccggtacctctgggagtgggtcaaggactat
ctcgaggatgctgaggaattcacacccagccccccagggtggggccactcggtgaccatg
ggctgcttcctacgggacatccttcttgatcagtactactttgagaccatcttcccgcgc
atcccgaccaaggtcaccgacgaggtgctggcggggctcaaggcgcggggcctgccgtgc
aaggcgctgggcaacgcggggcagggtggcgaggaccggcgcggcatcgccgagtccgcc
gcgcgccccgcctcggtgaagcagtcgctgagcgtggccatgggccagcgcgcgcccaac
cgcgcctcggcccgcgagctgggccgcgggacgggggccgacctgcagctggagcaggtg
atgaagaggaaggagagggcctcccccgtgcgcggggcagagaggagggaggccaggtcg
cggtcgcggtcgccgcgcggcgcacccgtcgccaggtgcgctgggcgtgcagcgtgggga
ctggcggcgtcgtgctgccggggatgtcacccaggggatgttgagtcgctgatgagcggc
agcgtcggggcttctgcggtgcgcgggcccatgatccccccctgctga

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