Auxenochlorella protothecoides: F751_6043
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Entry
F751_6043 CDS
T04132
Name
(RefSeq) Branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
F751_6043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apro03041
]
F751_6043
Spliceosome [BR:
apro03041
]
Complex A
Other components
Complex A specific factors
F751_6043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SF1-HH
KH-I_KHDC4-BBP
DAGK_cat
KH_1
RRM_7
CERK_C
PH_CERK
YegS_C
KH_12
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
23617434
NCBI-ProteinID:
XP_011398278
UniProt:
A0A087SI31
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MGQGPVPDRVMAEHRKPPRRPCMALKALKASVAGKRRHVWGRIPGQENTSTGDASTKKRK
RRSRWGEKEETNDEKAIMLMPNEIVLSNGMKVYLPPSVTGRSPTGDPEVLVFHQQLNALN
KKISEGEIDIPPEGERSPSPPPTYDAMGIRLNTREVRYREKMQRKRNELIETLIARDPTY
RPPSDYRPEKKWCKLSIPHRQYPGYNFIGLIIGPRGNTQQRMQAETNTKIAIRGRGSIKD
GTARDSKGAAGEDEDLHVMITGDRQEDVDAARRLVERLLKPLDEEMNEHKRIQLRELAAM
NGTLKDTEYCTNCAEPGHNADNCPKSALDVFRLPDQIAARVEEQYARDVARMNPGESGKM
EQEFSSFLAELGGTDPRAMPSGGAGFGGGPSSRAGLGSRSRPGDDLPDSCKLYIGNLSKS
MTEDVLRDLFSVHGNVLHAAVPRDMATGLARGFGFITFPDDATAAAARRAMDGHLVDDLP
LIVRMKGEPSSGPAFPMRRGGGPSRPDDDLPPENKLYVGSLPPSIDDAALQREFERFGPI
ASCRVIYDRDTNRPRGYAFVNFVDTEAARAALFNMNGFTGFEGGRPINVKISGQSGGPGD
PYHGQYGAAPPPPPAAAPTPADLYPGAYAPGPAQYQYAAAPAEEAPPPPPPPAPALPAPE
GGSVPAPTPAPVESEYERFMAEIPTSPLPSPVMLRGPSPTSVSDKTSRTDEEGFPVLVDG
ALARVHLDLQAEVLSWTLELGGPLCCAPGQRSTSLPVTEILAVEMQAARMRRAHALVIYT
FQRSPSNPSCWHPRQVTFTSPNEAVLRAWEAAVRSLLQRQAHRPRHLLVIVNPYGGSRLA
RATWATTVRPVLAKAGVRCTTLESAARGHAADLVRRHLEALEAGPHDPGPPVDGLLAVGG
DGLFHEMVNALLAARLAAGGRSRRLAALRLGHVPAGSTDAVACTLNGTRSAFTAAMHVAL
GDQVPLDVLRIDTAQPHTEFAVCMASYGFMGDLMAESEGLRWLGPLRYEVVGARMLAANR
SYRARLSYLPPPREAQPSFTRACRAGCDACRAGSHPAPGDAELGRPATVLWQTRRSEWVT
LEEEEFAGFMMVVMPCRSDKSKNGVAKYGHLSDGKLHLVVIKRCSRLMYLRFLLRMAHIG
LEAGGDHGDYIKVIPALAVRIEPIGKESQWNVDGELLPSSIFTAQLHRGAVDVFARGVDG
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgggacaggggccggtcccggaccgagtgatggcggagcacaggaagccaccccgccgt
ccatgcatggcgctgaaggcgctgaaggcctccgtggcaggtaagcgacgccacgtctgg
ggccgcattcctggtcaggagaacacaagcacaggggacgcctccacgaaaaagcgcaag
aggcgcagtaggtggggagagaaagaggaaaccaacgacgagaaggccatcatgctcatg
cccaatgaaattgtgctcagcaatggcatgaaggtgtacctcccgccctctgtgactgga
cgctcccccactggcgacccagaggtcctggttttccaccagcagctcaacgccctgaac
aagaagatctcagagggcgaaatcgacatccctccagagggagagcggtcaccctctccc
cccccaacgtatgatgccatgggcatccggctcaacacgcgtgaagtcaggtaccgcgag
aagatgcagcgcaagcgtaacgagctgatcgagaccctgatcgcgcgggatcccacctac
cgcccccccagcgactatcgaccggagaagaagtggtgcaagctgagcatcccacaccgc
caataccctggctacaatttcatcgggctcatcattgggccccgtggcaacactcagcag
cggatgcaggcagagaccaacaccaagatcgccatcagggggcgtggctcgatcaaggat
ggcacggctcgcgactccaaaggggctgctggtgaggacgaggacctacacgttatgatc
accggagaccggcaggaggacgtggatgctgcacggaggctggtggagaggctcctaaag
cccctggacgaggagatgaacgagcacaagcgcatccagcttcgggagctggcggcgatg
aacggcaccctcaaggacacagagtactgtaccaactgcgcagagccaggtcacaacgcc
gacaactgccccaagtctgccctggacgtgttccgcctgcccgaccagattgccgcccgt
gtggaggagcagtatgcgcgggacgtggctcgcatgaaccctggcgagtctggcaagatg
gagcaggagttcagctccttcctggcggagctgggcggcaccgacccgcgcgccatgccc
tcggggggcgccggcttcggcggcggtccgtcctccagggcgggcctgggctctcgctcc
cgccccggggacgatctgccagactcctgcaagctatacatcggcaacctgtccaagagc
atgacggaggacgtgctgcgagatctgttcagtgtgcatggcaacgtgctccatgccgcc
gtgccacgagacatggcaacaggcctggcacgggggtttggcttcatcaccttccccgac
gacgccaccgccgcggcggcgaggagggccatggacggacacctggtggacgatctgccc
ctgatcgtgaggatgaagggcgagcccagctccggccccgccttccccatgcgcagaggt
ggtggcccctcccgccccgacgacgacctgccgccggagaacaagctgtatgtcggctcg
ctgccccccagcatcgacgacgccgctctccagcgggaattcgagcgcttcggccccatc
gcctcctgccgcgtgatctacgaccgcgacaccaaccgcccgcgcggctacgcctttgtg
aactttgtggacacggaggcggcgcgggccgcgctgttcaacatgaatggcttcacaggc
ttcgagggggggaggcccatcaacgtcaagatctccgggcagtccggggggccgggagac
ccataccatggccagtacggcgccgccccgcctcccccgcctgctgctgcgccgacgccc
gccgacctctaccccggcgcgtacgcgccggggcccgcccagtaccagtacgctgcggcg
ccggcggaggaggcaccgccgccgccgccacccccggcacccgcactccccgcgcccgag
ggtggcagcgtgccggcccccacgccagcacccgtggagagcgagtacgagcgcttcatg
gccgaaatacccacatcccccctcccctccccggtgatgctgcggggcccctcgcccacc
agcgtctccgacaagacgtccaggacagatgaggagggctttcccgtgctggtggatggc
gcccttgccagggttcacctcgacctgcaggcggaggtgctgagctggacactcgagctg
ggggggcccctgtgctgtgctccgggccagcgctctacctccctgcccgtcaccgagatc
ctggcggtggagatgcaggcggcccgcatgcgcagggcccatgcgctggtcatctacacc
ttccagcggtctccctccaacccctcctgctggcacccccgccaagtcacgttcacctcc
ccgaatgaggccgtcctgcgcgcgtgggaggcggcggtgcggagcctgctgcagcgccag
gcgcaccgcccccgccacctccttgtcatagtcaacccgtacggcggctcgcgcctggcc
cgcgccacctgggccaccaccgtgcgccccgtgctggccaaggccggcgtgcggtgcacg
actctggaaagcgcggcgcgaggccacgccgccgacctggtgcgccggcacctggaggcc
ctggaggcggggccccacgatcccgggccgcccgtggatggcctgctggccgtgggcggc
gacggcctcttccacgaaatggtcaacgcgctgctggcggcgcgcctggcggcggggggg
cggtcgcgacgcctggccgcgctgcgcctcggccatgtccccgcgggctccaccgacgca
gtggcgtgcacgctgaacggcacccgctcggccttcaccgcggcgatgcacgtcgctctg
ggcgaccaggtgcccctcgacgtcctgcgcatcgacaccgcgcagccgcacaccgagttt
gcggtgtgcatggccagctacggcttcatgggcgacctgatggccgagtcggagggcctg
cgctggctggggccgctgcggtacgaggtggtgggcgcgcgcatgctggccgccaaccgc
tcctaccgggccaggctgtcctacctgccacccccgcgcgaggcccagcccagcttcacg
cgggcctgcagggcggggtgcgatgcctgccgcgcgggctcgcatcccgcgccgggcgac
gccgagctggggcggccggccaccgtgctctggcagacacggcggtcagagtgggtcaca
ctggaggaggaggagtttgctgggttcatgatggtggtcatgccctgccgcagcgacaag
tcaaaaaacggcgtcgccaagtatggccacctgagcgacggcaagctccacctggtggtg
atcaagcgctgcagtcgcctgatgtacctccgcttcctcctgcgcatggcgcacatcggg
ctggaggctgggggcgaccacggcgattacataaaggtcatccctgccctcgccgtccgc
atcgagccgatcggcaaggaaagccagtggaacgttgatggcgagctcctgcccagcagc
attttcactgcacagctgcatcgcggggcggtagacgtttttgccagaggcgtggacggc
tga
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