KEGG   Auxenochlorella protothecoides: F751_6211
Entry
F751_6211         CDS       T04132                                 
Name
(RefSeq) DDB1- and CUL4-associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
apro  Auxenochlorella protothecoides
Brite
KEGG Orthology (KO) [BR:apro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:apro03009]
    F751_6211
   04121 Ubiquitin system [BR:apro04121]
    F751_6211
Ribosome biogenesis [BR:apro03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    F751_6211
Ubiquitin system [BR:apro04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     F751_6211
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Sof1 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st EIF3I Beta-prop_EIPR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_HPS5 NBCH_WD40 WD40_RFWD3 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 23617602
NCBI-ProteinID: XP_011398956
UniProt: A0A087SK06
LinkDB
Position
Unknown
AA seq 449 aa
MKVKVINRSEEACTRTRSQDVLKVHRNLDPALHPFEKAKEYTRALNAAKLDRLFARPFLA
AFPHTDGITCLARSPARLNCLLSGTADGEVRLWDVAARRCLRRLVGHAGAVTGVAVAPSG
DVAVSAGADGTARLWRVPFAPFAGGPVERDASPVLQWTARGGLRGVDHHWARSQFATAGV
GVCVWDHARSDPVHAFEWGADTVASVRFNPAEPDLLASVGGDRSVALYDLRSATPLRKLV
MQTKSNALAWNPMEAFHFTLASDDCNLYTYDMRRLDVARCVHQDFVSAVMDVDYSPTGRE
FVAGGYDRSLRIFAKHGGHSREVYTTKRQQRVFAVRFSGDGTYVFSGSDDMNVRVWKAQA
SQQLGVTLPRERQKAAYGAALIERHKHLPEVRRVVGNRRTPTAIYKATKTRRAVMDAERR
KLKNRIAHSKPGSVVVKPARRRKIVEELE
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgaaggtgaaggtaatcaacaggagcgaggaggcgtgcacccgcacccggtcgcaggat
gtcctcaaggtgcaccgcaacctcgacccggccctgcacccctttgagaaggccaaggag
tacacgagggccctgaatgccgccaagctggaccggctgtttgcgcgccccttcctggcg
gccttcccccacaccgacggcatcacctgcctcgcccgctcccccgcccgcctcaactgc
ctgctgtccggcaccgccgacggcgaggtccggctctgggacgtggccgcgcggcgctgc
ctgcgccgcctggtgggccacgccggcgccgtcaccggcgtggcggtggccccctccggc
gacgtcgccgtgtccgccggcgccgacggcaccgcccgcctctggcgcgtgcccttcgcg
cccttcgccggcgggcccgtggagcgcgacgcctcgccggtgctgcagtggaccgcgcgc
ggcggcctgcgcggcgtggaccaccactgggcgcgctcccagttcgccaccgcgggcgtc
ggtgtctgtgtgtgggaccacgcgcgctctgacccggtgcacgcctttgagtggggcgcc
gacacggtggcctcggtgcgcttcaaccccgcggagcccgacctgctggcctccgtcggc
ggcgaccgctccgtcgcgctgtacgacctgcgctccgccacccccctgcgcaagctggtc
atgcagaccaagtccaacgcgctggcctggaaccccatggaggccttccacttcacgctg
gcctccgacgactgcaacctgtacacctatgacatgcggcgcctggatgtcgcgcgctgc
gtgcaccaggactttgtgtccgcggtgatggacgtggactactcgcccacgggccgcgag
ttcgtggccggcggctacgaccgctccctccgcatcttcgccaagcacggcgggcactcg
cgcgaggtgtacaccaccaagcgccagcagcgcgtgtttgcggtgcgcttctcgggggac
ggcacctacgtcttctcggggtcggacgacatgaacgtgcgcgtgtggaaggcgcaggcc
tcccagcagctgggcgtgacgctgccgcgagagcgccagaaggcggcctacggcgccgcg
ctcatcgagcgacacaagcacctgccggaggtgcggagggtggtcggcaaccgacgcacc
cccacggccatctacaaggccaccaagacgcggcgggcggtcatggatgcagagcgaagg
aagctcaagaaccgcatcgcgcacagcaagccggggagcgtggtggtcaagcccgcgcgg
cggcggaagatcgtggaggagctggagtga

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