Auxenochlorella protothecoides: F751_6294
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Entry
F751_6294 CDS
T04132
Name
(RefSeq) putative RNA polymerase II transcription factor B subunit 1-1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03022
Basal transcription factors
apro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
F751_6294
09124 Replication and repair
03420 Nucleotide excision repair
F751_6294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apro03021
]
F751_6294
03400 DNA repair and recombination proteins [BR:
apro03400
]
F751_6294
Transcription machinery [BR:
apro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
F751_6294
DNA repair and recombination proteins [BR:
apro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
F751_6294
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
Motif
Other DBs
NCBI-GeneID:
23617685
NCBI-ProteinID:
XP_011399039
UniProt:
A0A087SK89
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MLLHTPSAAGNLHLFSPGHLLNLCDQTGVVPRGSRHRDSSSGTQQAPNKPFIRLEWPTGT
LVLGFESVSDRDEAVDLIKKLRKAAYFAQDRDLEKLYLELVVPGILPEQEFWAARASHLA
RLGNGQTDTVHFSLTPEIIAQIFNERPEVHRAFLAKVPHELNEKEFWTVYFKEQYKRLAR
RRKGLGPDEEDFEDEVFGPFRRQIALQEAARARGRMQEVDPTLNLEAAQGEQYAMLQRSE
GAEAGLGAAGYLAKDLNRHAALVLEGTPEGVLDLAGDGDGPSSHDTAAIATRLAASQAGA
SRTAAREPRGEPLRHRDHGLEDLRGPEQAPCLPYITRFSSASSWQAPGIPLNIRDPAAYY
RAGAPAVDGAATPESEPMSTLRDPGDHTPTPLSAVLRSIDPTALPLCPCDPALARAVLEE
LSAGTDAGLAARFGALAAGVHGHVYAGVLLQPCEEGIQAAVARHKEEVAASIVLGKAVRA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcacacgcccagcgcggcagggaacctccacctcttctcccccgggcacctg
ctcaatctatgcgaccagactggcgtggtcccccgcggatcgcgccatcgcgactccagc
tctggcacgcagcaggcccccaacaagcccttcatcaggctggagtggcccacagggaca
ctggtgctagggtttgagtctgtcagcgaccgcgatgaggctgtcgacctcatcaagaag
ctcaggaaggccgcctactttgctcaggacagggacctggaaaagctgtacctggaactg
gtggtgccaggcatcctgcccgagcaggagttctgggcggcccgcgcttcgcacctggcg
aggctggggaacgggcaaaccgacactgtgcactttagcctcactccggagatcattgca
cagatcttcaatgaacggcctgaggtgcatcgcgccttcctcgccaaggtcccgcatgaa
ctcaacgaaaaggagttttggacagtctacttcaaggagcagtacaagcgtctagcaagg
agacgcaagggcttggggccggacgaggaggattttgaggacgaggtgtttggcccattt
cgacgacagattgccttgcaggaggcagcacgggcccgcggcaggatgcaggaggtggac
cccacgctgaacctggaggcggcccagggagagcagtacgccatgctccagcgctcggag
ggggccgaggccgggctgggcgccgcgggctacctggccaaggaccttaacaggcacgca
gccctggtcctggagggcacccccgagggcgtgctggacctcgccggggacggggacggc
ccctcctcccacgacacggccgccatcgccacgcgcctggcggcctcccaggcgggggcg
tcgcgcacggccgcgagggagcccaggggcgagccgctgcgccatcgcgaccacggcctt
gaagaccttcgagggcctgaacaggcaccctgcctcccatacataactcgtttctcttct
gcgtcgtcctggcaggctcccggcatcccgctcaacatccgcgacccggcggcgtactac
cgcgccggcgcgccggcggtcgacggggccgccactccggagtccgagcccatgagcacc
ctgcgcgatcccggcgaccacacccccaccccgctgtcggccgtgctacggtccattgac
cccaccgcgctccccctctgcccctgcgaccccgcgctcgcccgcgctgtgctggaggag
ctgtccgccggcaccgacgcggggctggcggcgcgcttcggcgcactggcggcgggtgtg
cacggccacgtgtacgcgggggtgctgctccagccgtgcgaggagggcatccaggccgcc
gtggcgcggcacaaggaagaggtggctgcctccattgtcctggggaaggcggtgcgggca
tag
DBGET
integrated database retrieval system
