Auxenochlorella protothecoides: F751_6420
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Entry
F751_6420 CDS
T04132
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F751_6420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_6420
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
F751_6420
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
F751_6420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DAHL
DUF501
OmpH
TBCC_N
Motif
Other DBs
NCBI-GeneID:
23617811
NCBI-ProteinID:
XP_011395777
UniProt:
A0A087SB07
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MAKQRKLQGEMEAALKKIAEGVDEWEDLWNKYERSHDMDAAQRERLVAEMKRDLKKLQRL
REAVRGWLANNEVRVAKDTLEKARRSIEIQMERFRVVEKDVKGKAHMGLGRDALDPAAAA
KQQCADWLTDVMDRLQTEIEACEADVENLGPAGNKAKKTRLAELQGLIARHQQHVTHLEQ
TLRLLRNDQVEAEEVEDALKEGLEAYLDTGGEAFDPGEDEGLYASLPLEEVDANVGKLAD
PVTPKVAPVALPEEPAKKAKPGKPTPIKTKPVKGTPVTEAAARPPAKAAEEAQAAGPPFQ
LQDPGTNVLGPMACIQALHWSFASRPTADDAMWRDLGGNLSGLEQASLALQSGTGSAVPF
EKVKDDALFFAFYFQPGTLRQAAAIKELHARGWLWHTTLHTWMTRAEQPKVLAPTYEQGV
FCYWDSELRAGQEAGQPISGWSSHLTAPTFVLDYSCLDTAVA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcagcggaagctgcagggcgagatggaggccgcgctaaaaaagatcgcggag
ggtgtggacgagtgggaggacttgtggaacaagtacgaacgatcccacgacatggacgcc
gcgcagcgggagcggttggtcgccgagatgaagcgcgatctgaagaagctccagcggctg
cgggaagctgtccgtggctggctagccaacaacgaggtccgggtggccaaggacacgctg
gagaaggcgcggagaagcatcgagatccagatggagcgcttccgggtggtggaaaaggat
gtcaagggcaaggcccatatggggctcggccgggacgccctagaccctgcggcagctgcg
aagcagcagtgcgccgactggctcacagacgtcatggaccgtctgcagaccgagattgag
gcatgcgaggcggatgtagagaacctgggccccgccggcaacaaggccaagaagacacgg
ctggccgagctgcagggcctcatcgcgcggcaccagcagcacgtgacgcacctggagcag
acgctgcgcctgctgcgcaacgaccaggtggaggcggaggaggtggaggacgcgctgaag
gaggggctggaggcctacctggacacgggcggcgaggcgttcgaccccggggaggacgag
ggcctgtacgcctctctgcccctggaggaggtggacgccaatgtggggaagctggccgac
ccggtgacgcccaaggtcgcgcccgtcgccctgcccgaggagcctgcgaagaaggcgaag
ccgggcaagccgacgccgatcaagaccaagcccgtcaaaggcacccccgtgacagaggct
gctgcccgtccgcccgcaaaagctgcagaggaggcgcaagccgcggggccgcctttccag
ttgcaggacccggggacaaacgtcctggggcccatggcctgcatccaggccctgcactgg
tcctttgcctccaggccgacggccgacgacgcgatgtggcgggacctgggcggcaacctg
tctgggctggagcaggcgtccctggcgctgcagtccggcaccggctccgccgtgccgttt
gagaaagtcaaagacgacgcgctgttcttcgccttctacttccagccgggcacgctgcgg
caggctgcggcgatcaaggagctgcatgcgagggggtggctgtggcacaccaccctgcac
acctggatgacgagagcggagcagcccaaggtcctggcgcccacatatgagcagggagtg
ttctgttattgggactccgagttgagggcagggcaggaggcggggcagcccatctcaggc
tggtcctcgcacctcaccgccccaacctttgtgctggactactcctgcctcgacactgct
gtggcatga
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