Auxenochlorella protothecoides: F751_6509
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Entry
F751_6509 CDS
T04132
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03030
DNA replication
apro03410
Base excision repair
apro03420
Nucleotide excision repair
apro03430
Mismatch repair
apro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F751_6509
03410 Base excision repair
F751_6509
03420 Nucleotide excision repair
F751_6509
03430 Mismatch repair
F751_6509
03440 Homologous recombination
F751_6509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apro03032
]
F751_6509
03400 DNA repair and recombination proteins [BR:
apro03400
]
F751_6509
Enzymes [BR:
apro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F751_6509
DNA replication proteins [BR:
apro03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
F751_6509
DNA repair and recombination proteins [BR:
apro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
F751_6509
MMR (mismatch excision repair)
DNA polymerase delta complex
F751_6509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DUF3239
Motif
Other DBs
NCBI-GeneID:
23617900
NCBI-ProteinID:
XP_011402039
UniProt:
A0A087STD6
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MALDILEDDHGQFTIWGASASGASVLLQVQGFRPYLYVVAPAAMPGSAPALDWFEDRGLR
ESFRAVVNRAIPPDLRVAAVLACDRRPLQYCRPADLGPAASPMLRLEFDPGTSLRRAAPV
LARCLASPGLLEAGWNFGAGTMFESEIGLLQRFLADMPVSGGAWLYVPPAASPKAGAPAP
GYTLAQEDRRAAGFDIDATAPWQALTCLTPDATQLADAGWSPFPPGSAAAGYPASGARTL
VFRSEAAMLRAFLAWLRAADPDLLAVFDAGRTLGALGARCAALRVDGGAAALGRAPPGSS
RSRPLRLKRITTYSAAWVRSQSRMSSTSNQETLRAEVDGRVVVDVQRQVLTSQNLSTFTL
TDCVQSLLGGTLETLAPREVAALAAGDGAGLLRLARYMATRARAVRALLLHLATVPDMVE
MARVTGLTLGQVAYQAQMVRTHSLLLRTAGRRGYVLPARLEAGQLQEHTFILHPVENRTA
GLYTNPVAILDFASLYPSIYRAHNLCYTTLVHPEDRGLFAEDQTTVTPTGDVFVKPAVRK
GLLPAILAALTVARAATRDQLKAATSEAQRAVLDGRQKALKVTANALYGFTGAQTSPLQC
IPLADSCLAYGAQACRRALDALESASRSGELGPIGRGARVIYGHTDSLCEGGFAVFPAAS
TPAEAIEVGKRTAAIVSAAFPDPMELKFERVCNPLLLIHVNRYAGKTWERPDSQPALMGL
VSMWRQAAPIVRTTLHGVLERIIMRGDVESAIAFVEEEVRRLLSGRVSLHELIMTQGLWR
ITGEQVSSAAAGDPAAAAEVRGPHASLAVRLVQRDPGRAFVLGERLPYVLLAGAPKQDDA
AEDPVMAVRSGTRADYLLYWNNKLVRPLSEMLGHCMPPARVQALMQGAHTRVRVEEVGSR
VAKPGGASLSPPTPSPRAKGRRQGGRQVGMTAFYAATAKCIGCKRTLPQTSGTAPALCEI
CSRQAGATHPHVHACRGLQRCRVGFAASALHWPAMKNSGSPFPKTHSWIIACLPPQQVRL
TAAPPLGRHRDPGIAARVVLETTARQAEAEALRARAGSICRACDSATLTQPFLCENGACA
IYFQRREACIDLEALGETWVRLRGGAAG
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggccctggacattctggaggacgatcatgggcagttcaccatctggggggcgagcgcc
tcgggtgccagcgtgctcttgcaggtccagggcttccgcccctacctctacgtcgtggcg
ccggcggccatgccaggctccgccccggccctggactggtttgaggaccgagggctcagg
gagtcgtttcgcgccgtggtcaacagggctattcccccagacctcagggtggctgccgtg
ctggcatgcgacaggcggccccttcagtactgtcgccccgcagacctcgggccggccgcc
tcgcccatgctgcgactcgaattcgatcccggcaccagcctgcgccgagcagcccccgtc
ctcgcgcgctgcctggcctcccccggcctgctggaggcggggtggaactttggggcgggg
acgatgttcgagagtgagatcggcctgctgcagcgcttcctcgcagacatgcccgtctcc
ggcggggcctggctgtacgtcccgccggccgcgagccccaaggctggcgcaccggcgccc
ggttacactctggcccaggaggatcggcgggcggccggcttcgacatcgatgcgacggcg
ccctggcaggccctgacctgcctcacccccgacgccacacagctcgcggacgcaggctgg
tcgccctttccccctggcagcgccgccgcagggtaccccgcctccggcgcgcgcacgctg
gtgttccgcagcgaggcggcgatgctgcgcgccttcctggcctggctgcgggccgccgac
cccgacctgctggcggtgttcgacgccgggcgcacgctgggcgcgctgggcgcgcgctgc
gccgcgctgcgcgtggacggaggcgccgcggcgctggggcgcgccccgccggggtcgagc
cgctcgcgcccgctgcgcctcaagcgcatcaccacctacagcgcggcctgggtgcggtca
cagtcgcgcatgagcagcaccagcaaccaggagacgctgcgcgcagaggtggacgggcgg
gtggtcgtggacgtgcagcgccaggtgctgacctcgcagaacctgtccaccttcacgctg
accgactgcgtgcagagcctgctgggcggcacgctggagaccctggcgccgcgggaggtc
gccgcgctggcggccggcgacggcgcggggctgctgcgcctggcgcggtacatggcgacg
cgcgcgcgtgcggtgcgcgcgctcctcctccacctggccacggtgccggacatggtggag
atggcgcgcgtgaccggcctgaccctgggccaggtggcgtaccaggcgcagatggtgcgc
acgcacagcctgcttctgcgcaccgccgggcggcgcgggtacgtgctgccggcgcggctg
gaggcgggccagctccaggagcacaccttcatcctgcaccccgtggagaacagaacggcg
gggctgtacacgaacccggtggccatcctcgactttgccagcctgtacccctccatctac
cgcgcgcacaacctgtgctacaccacgctggtgcacccggaggacaggggtctcttcgcg
gaggaccagaccacggtcacgcccacgggcgacgtgtttgtgaagcccgccgtgcgcaag
ggcctgctgccagccatcctggcggccctcaccgtcgcccgggccgccacgcgcgaccag
ctcaaggccgcgaccagcgaggcgcagcgggcggtgctggacggccggcagaaggccctc
aaggtcacggcaaacgcgctgtacggcttcacgggcgcacagacctcgccgctgcagtgc
atcccgctggcagactcctgcctggcttacggcgcacaggcctgccgccgcgcgctggat
gccctggaaagcgcgagcaggtctggggagctgggccccatcggacgcggcgcacgcgtc
atctacggccacaccgacagcctgtgcgagggagggtttgctgtcttcccggccgcctcg
acccctgcagaggccatagaggtcggaaagcgcactgccgcaatcgtgtcggctgccttc
cccgatcccatggagctcaagtttgagcgcgtctgcaacccgctcctgctcatccatgtc
aacaggtacgctggcaagacgtgggagcgacccgacagccaaccggcgctcatgggcctc
gtcagcatgtggcgccaggcggctcccatcgtccgcacgaccctgcatggcgtcctggag
cggatcatcatgcgtggcgacgtggagtcggcgatcgcgtttgtggaggaggaggtccgc
cgcctgctctctggacgggtctccctgcacgaactcatcatgacgcagggcctgtggcgg
atcaccggggagcaagtgagcagcgccgcagcgggggaccccgcggccgccgccgaggtg
cgtggaccccatgcctcgctggcggtgaggctggtccagcgtgatcccgggcgcgccttt
gtgctgggcgagcgcctgccctacgtgctgctggcgggggccccgaagcaggacgacgcg
gcggaggatccggtgatggccgtgcggtctggcacgcgcgcagactacctgctctactgg
aacaacaagctggtgcgtccgctgagcgagatgctggggcattgcatgccgccggcgcga
gtccaggcgctgatgcagggcgctcacacccgggtgagggtggaggaggtgggctccaga
gtagccaagccgggtggcgcatcgctgtcccccccaaccccgtcgccccgggccaagggc
cggaggcagggtggtcgccaggtgggcatgaccgccttctacgccgcgacagccaagtgc
ataggctgcaagcggacgctgccccagacttctgggacggcgcctgcactgtgcgagatc
tgttcgaggcaagcgggggcaactcatccgcatgtccatgcatgcaggggcctgcagcga
tgcagagtaggatttgcagcatctgccctgcactggcctgcaatgaaaaattcaggctct
cccttccccaaaacacattcttggatcattgcttgccttccaccgcagcaagtacgcctc
acagctgcccccccccttggccgccacagggatccaggtatcgctgcaagagtggtcctg
gagaccactgccaggcaagcggaggcagaggccctccgggcccgggcaggcagcatatgt
cgggcctgcgactctgccacgctgacgcagccctttctctgcgagaacggtgcctgcgcc
atatacttccagaggcgtgaggcatgcatcgatctggaggcactgggggagacctgggtc
agactgcgggggggtgctgcaggttag
DBGET
integrated database retrieval system
