Auxenochlorella protothecoides: F751_6659
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Entry
F751_6659 CDS
T04132
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03018
RNA degradation
apro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
F751_6659
09123 Folding, sorting and degradation
03018 RNA degradation
F751_6659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_6659
03041 Spliceosome [BR:
apro03041
]
F751_6659
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
F751_6659
mRNA degradation factors
5'-3' decay
Lsm complex
F751_6659
Spliceosome [BR:
apro03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
F751_6659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
23618050
NCBI-ProteinID:
XP_011399640
UniProt:
A0A087SLU8
LinkDB
All DBs
Position
Unknown
AA seq
103 aa
AA seq
DB search
MFKGGQKKDNALDLSKLVDKTVRVKLAGGREVEGVLKGFDQLLNLVLDESTEFLRDAEDP
LRVTDETRTLGLVVCRGTSVTLVAPTAGTEEIANPFIQPEEEA
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagggcgggcagaagaaggacaatgccctggatctcagcaagctggtggacaag
actgtccgtgtaaagctcgctgggggacgtgaagtggaaggagtactcaaagggttcgac
cagctgctgaatttggtgctcgatgaatccactgagttcctgcgagatgctgaagaccca
ctgcgcgtaacagacgagacacggacactgggcctggtggtgtgtcgtgggacgagtgtg
acgctggtggcgccaactgccggcaccgaggagatcgccaaccccttcatccagccagag
gaggaggcatga
DBGET
integrated database retrieval system
