KEGG   Auxenochlorella protothecoides: F751_6751
Entry
F751_6751         CDS       T04132                                 
Name
(RefSeq) Transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    F751_6751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:apro03009]
    F751_6751
Ribosome biogenesis [BR:apro03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    F751_6751
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 Utp13 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_Nup120_160 WD_LRWD1 Beta-prop_Vps41 Ammonium_transp Polysacc_lyase-like
Other DBs
NCBI-GeneID: 23618142
NCBI-ProteinID: XP_011395576
UniProt: A0A087SAG6
LinkDB
Position
Unknown
AA seq 723 aa
MVVAKTNYRIESSLEVFYTGGPAALFPDGDRLACACGDETKIIDLETGAVLRSLPGDSEP
VTALAISPDGRAVFSASRALLLRAWSAETGKVVQTYVGHKAPVAGIAVDPTGSLLATVSA
DHSTRVWDVAGGFCTHSFGGHRGIVLAACFHPHEMLLVTASDDTEIRVWDLVAKSCRRVL
KGHFSAVTCLGLSADGWTLVSGSRDGVCIAWNLRSGAKLSTTPVLEAVEALALVGNNDEV
TDVRFVERRASGAGAGPSPACVAVATNSPVIRVFSTPRFDCLASLAGHSAAVLALDAALL
AAPPGVNDGESNRSALQLLASGSKDCGVRVWDVSAGTCLALGEGHVGAVAGVAFSRRRPA
AFLVSGGSDRLLKVWDTSAVVGATAGGAGGDGDGTTSDRPLRLRTVAAVAAHDRDVNAVA
VSPDDALVASASQDRTAKLWRAADLVLVATLRGHRRGVWSVAFSPVDRLVATASADASLR
IWSAADGACLRALEGHAASALRLCWVSLGAQLVSAGADGLVKLWGARAGEAAATLDAAED
KVWALDARGDGAQLVSGGGDGRLAYANALADRDWTAAAKTALERDQPRRLLAVVNNVLEG
ADEPADAEAILRPLVAPLRGEALRRLLETVRDWNTHARSCHAAAALLRAVLCSHAPGELC
ALPGVAGIVDALAPYTQRHAARLDRLARSAFLLDHVLDSMSMLEPVDEAAQNGHAKPDGV
LAG
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggtggtggccaagacaaactaccgcattgagtcatctctggaagtgttttacaccgga
ggcccggcggccctgttccccgatggagaccgccttgcttgcgcatgcggcgacgaaacc
aagatcatcgacctggaaactggcgccgtgctccgctccctgcctggggactctgagccc
gtgacagctctggccatcagccccgatggacgcgccgtcttctccgccagccgcgccctg
ctcctccgcgcctggtctgcggagacgggcaaggtggtgcagacatatgtcgggcacaag
gcccccgttgccggcatcgccgtggaccccacgggctccctcctggccaccgtctccgcc
gaccactccacgcgggtgtgggacgtggccggcggcttctgcacccactcctttgggggg
cacaggggcattgtgctggccgcctgcttccacccccacgagatgctgctcgtcaccgcg
agcgatgacacggagatccgggtgtgggacctggtcgccaagtcctgcagaagagtcctc
aaggggcacttctcggcggtgacctgcctgggcctgtctgccgacggctggaccctggtc
tccggctcccgcgacggcgtctgcatcgcctggaacctgcgctccggcgccaagctttcc
accacccccgtgctggaggccgtggaggcgctggccctggtaggcaacaacgacgaggtg
accgacgtgcgcttcgtggagcggcgcgcaagcggcgccggcgccggcccctcccccgcc
tgcgtggcggtggccaccaactcccccgtcatccgcgtcttctccaccccccgtttcgac
tgcctggccagcctggcggggcactcggccgccgtgctggccctggacgcagcgctgctg
gcggcccccccgggagtaaatgacggcgaaagcaaccgctctgccctccagctgctggcc
tcggggtcaaaggactgcggggtgcgggtgtgggatgtgagcgccgggacctgcctggcg
ctgggcgagggccatgtcggcgcggtggcgggtgtggccttctcgcgccgccgccccgcc
gccttcctcgtctccggcggctccgaccgcctgctcaaggtctgggacaccagcgccgtc
gtcggagcgacggccggcggggctggcggtgacggcgacggcaccacctccgaccgaccc
ctgcgcctacgcaccgtggcggccgtggcggcgcacgaccgcgacgtcaacgcggtggcc
gtctcccccgacgacgcgctggtggccagtgcctcgcaggaccgcaccgccaagctgtgg
cgcgccgccgacctggtgctggtcgccacgctgcgcgggcaccgccgcggcgtctggtcc
gtggccttctcgcccgtggaccgcctggtggcgacggccagcgccgacgccagcctgcgc
atctggtccgcggccgacggcgcctgcctgcgcgcgctggagggccacgccgcctccgcg
ctgcgcttgtgctgggtcagcctgggcgcgcagctggtctccgccggcgccgacggcctg
gtcaagctctggggtgcgcgcgcgggggaggccgcggccacgctggatgccgcggaggac
aaggtctgggcgctggacgcgcgcggcgacggcgcgcagctggtgtctggcggtggcgac
ggcaggctcgcctacgccaacgcgctggccgaccgcgattggacggcggcggccaagacc
gcgctggagcgggaccagccgcgccgcctgctggcggtggtcaacaacgtgctggagggc
gcagatgagcccgctgatgcagaggcgatactgcgcccgctggtggcgccgctgcggggc
gaggcgctgcggcgcctgctggagaccgtgcgcgactggaatacgcacgcgcgcagctgc
cacgcggcggccgcgctgctgcgcgccgtgctgtgcagccacgcgccgggcgagctgtgc
gcgctgccgggcgtggccggcatcgtggacgccctggcgccctacacccagcgccacgcc
gcgcgcctggaccgcctggcgcgctccgctttcctcctggaccacgtgctggacagcatg
agcatgctggagccggtggacgaggccgcccagaacgggcacgccaagccagacggcgtg
ctggcaggctga

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