Auxenochlorella protothecoides: F751_6751
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Entry
F751_6751 CDS
T04132
Name
(RefSeq) Transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F751_6751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apro03009
]
F751_6751
Ribosome biogenesis [BR:
apro03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
F751_6751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Utp13
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_Vps41
Ammonium_transp
Polysacc_lyase-like
Motif
Other DBs
NCBI-GeneID:
23618142
NCBI-ProteinID:
XP_011395576
UniProt:
A0A087SAG6
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MVVAKTNYRIESSLEVFYTGGPAALFPDGDRLACACGDETKIIDLETGAVLRSLPGDSEP
VTALAISPDGRAVFSASRALLLRAWSAETGKVVQTYVGHKAPVAGIAVDPTGSLLATVSA
DHSTRVWDVAGGFCTHSFGGHRGIVLAACFHPHEMLLVTASDDTEIRVWDLVAKSCRRVL
KGHFSAVTCLGLSADGWTLVSGSRDGVCIAWNLRSGAKLSTTPVLEAVEALALVGNNDEV
TDVRFVERRASGAGAGPSPACVAVATNSPVIRVFSTPRFDCLASLAGHSAAVLALDAALL
AAPPGVNDGESNRSALQLLASGSKDCGVRVWDVSAGTCLALGEGHVGAVAGVAFSRRRPA
AFLVSGGSDRLLKVWDTSAVVGATAGGAGGDGDGTTSDRPLRLRTVAAVAAHDRDVNAVA
VSPDDALVASASQDRTAKLWRAADLVLVATLRGHRRGVWSVAFSPVDRLVATASADASLR
IWSAADGACLRALEGHAASALRLCWVSLGAQLVSAGADGLVKLWGARAGEAAATLDAAED
KVWALDARGDGAQLVSGGGDGRLAYANALADRDWTAAAKTALERDQPRRLLAVVNNVLEG
ADEPADAEAILRPLVAPLRGEALRRLLETVRDWNTHARSCHAAAALLRAVLCSHAPGELC
ALPGVAGIVDALAPYTQRHAARLDRLARSAFLLDHVLDSMSMLEPVDEAAQNGHAKPDGV
LAG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggccaagacaaactaccgcattgagtcatctctggaagtgttttacaccgga
ggcccggcggccctgttccccgatggagaccgccttgcttgcgcatgcggcgacgaaacc
aagatcatcgacctggaaactggcgccgtgctccgctccctgcctggggactctgagccc
gtgacagctctggccatcagccccgatggacgcgccgtcttctccgccagccgcgccctg
ctcctccgcgcctggtctgcggagacgggcaaggtggtgcagacatatgtcgggcacaag
gcccccgttgccggcatcgccgtggaccccacgggctccctcctggccaccgtctccgcc
gaccactccacgcgggtgtgggacgtggccggcggcttctgcacccactcctttgggggg
cacaggggcattgtgctggccgcctgcttccacccccacgagatgctgctcgtcaccgcg
agcgatgacacggagatccgggtgtgggacctggtcgccaagtcctgcagaagagtcctc
aaggggcacttctcggcggtgacctgcctgggcctgtctgccgacggctggaccctggtc
tccggctcccgcgacggcgtctgcatcgcctggaacctgcgctccggcgccaagctttcc
accacccccgtgctggaggccgtggaggcgctggccctggtaggcaacaacgacgaggtg
accgacgtgcgcttcgtggagcggcgcgcaagcggcgccggcgccggcccctcccccgcc
tgcgtggcggtggccaccaactcccccgtcatccgcgtcttctccaccccccgtttcgac
tgcctggccagcctggcggggcactcggccgccgtgctggccctggacgcagcgctgctg
gcggcccccccgggagtaaatgacggcgaaagcaaccgctctgccctccagctgctggcc
tcggggtcaaaggactgcggggtgcgggtgtgggatgtgagcgccgggacctgcctggcg
ctgggcgagggccatgtcggcgcggtggcgggtgtggccttctcgcgccgccgccccgcc
gccttcctcgtctccggcggctccgaccgcctgctcaaggtctgggacaccagcgccgtc
gtcggagcgacggccggcggggctggcggtgacggcgacggcaccacctccgaccgaccc
ctgcgcctacgcaccgtggcggccgtggcggcgcacgaccgcgacgtcaacgcggtggcc
gtctcccccgacgacgcgctggtggccagtgcctcgcaggaccgcaccgccaagctgtgg
cgcgccgccgacctggtgctggtcgccacgctgcgcgggcaccgccgcggcgtctggtcc
gtggccttctcgcccgtggaccgcctggtggcgacggccagcgccgacgccagcctgcgc
atctggtccgcggccgacggcgcctgcctgcgcgcgctggagggccacgccgcctccgcg
ctgcgcttgtgctgggtcagcctgggcgcgcagctggtctccgccggcgccgacggcctg
gtcaagctctggggtgcgcgcgcgggggaggccgcggccacgctggatgccgcggaggac
aaggtctgggcgctggacgcgcgcggcgacggcgcgcagctggtgtctggcggtggcgac
ggcaggctcgcctacgccaacgcgctggccgaccgcgattggacggcggcggccaagacc
gcgctggagcgggaccagccgcgccgcctgctggcggtggtcaacaacgtgctggagggc
gcagatgagcccgctgatgcagaggcgatactgcgcccgctggtggcgccgctgcggggc
gaggcgctgcggcgcctgctggagaccgtgcgcgactggaatacgcacgcgcgcagctgc
cacgcggcggccgcgctgctgcgcgccgtgctgtgcagccacgcgccgggcgagctgtgc
gcgctgccgggcgtggccggcatcgtggacgccctggcgccctacacccagcgccacgcc
gcgcgcctggaccgcctggcgcgctccgctttcctcctggaccacgtgctggacagcatg
agcatgctggagccggtggacgaggccgcccagaacgggcacgccaagccagacggcgtg
ctggcaggctga
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