Auxenochlorella protothecoides: F751_6811
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Entry
F751_6811 CDS
T04132
Name
(RefSeq) Pre-mRNA-processing factor 40-like protein A
KO
K12821
pre-mRNA-processing factor 40
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
F751_6811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apro03041
]
F751_6811
Spliceosome [BR:
apro03041
]
Complex A
U1 snRNP components
U1 related factors
F751_6811
Complex B
F751_6811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Pyr_redox_2
WW_TCERG1
Lys_Orn_oxgnase
FF_PRPF40A
Pyr_redox
Motif
Other DBs
NCBI-GeneID:
23618202
NCBI-ProteinID:
XP_011396721
UniProt:
A0A087SDN9
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MLLQELPVPAWLSRLAQAAPRAAVPSAAPSGPGSAWTEHTAPDGRKYYYNAGTKQSVWTK
PVELQTPEAALKAVEAARSGAKAGVFVAQPGSIQTGPTPHHATTAEAKDAFKALLNETGV
SSTNSWDEVSRAIMADKRFGSLKTLGERKAAFNEFVQQRRKEEAEAARAARMAAKEGFYE
LLDGCRALDALPKFSRARDELELDPRWLAVASAREREELFEDWVEERARAEKERHRLERK
RAQNALRDLLEGASWLVAGTPWRRAQDRLAGVPEFEAVDAAGRLEVFREVMEEVEKREKE
AAARAREELVRSERANRAAFRELLADLRARGAVHARSRWREALALVEAEPAYLAVERNTT
GSRPRELFEDLLEDMEKAYLEDRAEIKAVVAERGLVVDIDSKLEDFLAALGRAAPAEAAP
AGKDGAAADGMDRGDGEGKDVSAGEVTVAQGAQALGAGAEPALPDSIPTQSLQLYFVEQQ
GLARDEIAKREKEHRYQREDFSRLLRHERRIEAETPWEDAVQLLEKEPEWKELESLEEKR
ELFDAFIAKLKAKEAERAERKKSRRDDDRSDDERRDRKRHKHKKDRKRHHGDSEDERDGK
RDRRSRDRSRSESQRRSMEECRVVILGAEMEALQLVSLLPRSLQQQCMVLDHAGSWLSRW
TTAWRGLGIQHLRSPVTHHPGPEPGAFSAWIEKQGRSGELLEAVPGYSPLPTARLLEDYC
LSKVVKALPPCLQRIRQDTLERVEPTPYQGTASESDGCLFNSRPDSLFLDACQVTHLPPL
SFMFDPGGLTLHLGSGAEVLTRALVVSRVDSRPLIPPWAADLVDREGTAVRSAHRLRLAE
EELAGRSVAVVGGGMTSVTLALAAAARGARAVTLVARRPLRQAPFEVGVGWQGPKLMVPF
AGQPDPATRLAACRAARAGATINGPAWEVLAAAVRRGDVAVREGRTVERVAREGDAGGGL
EVRLEATRGLHGACASALPASDPSPGSNEGESLTVDEVWVACGAATVPADSAPFTVLDAL
SLPGGLFVGGYPRCDDASLVLPGAPVYVLGRTAMLACGPTAGTLGGNREAAKRVAASLAR
LDMAGEKAWHAAAGKLQAAPAPRLELLPPPEAEGAMWQAPRKKVPVAREPDRIDVSDLPP
NLPRKELGQYRMIDEGFDLTLVLQLEEPVTKDQVLRVRTAFDWQSLEVWAVGQIQAFHLH
VPKLWGRILPGKCGIKVNVRTKKLFVCLYKETDAEWRYLKGF
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccaggagctcccggtgccagcgtggctgtctcgcctcgcccaggctgcaccc
agggcggccgtgcccagcgccgcaccctccggccctggctcagcctggaccgagcacacc
gccccagatggacgcaagtactactacaacgccgggaccaagcagagcgtctggaccaag
cctgtggagctgcagacgccagaggccgcgctcaaggcggtggaggccgcccgctcgggc
gccaaggccggcgtgtttgtggcccagccggggtccatccagacgggccccaccccccac
cacgccaccaccgcggaggccaaggacgccttcaaggcgctgctcaacgagacgggggtt
tccagcaccaacagctgggacgaggtgtcgcgggccatcatggctgacaagcgtttcggc
tcgctcaagacgctgggcgagcgcaaggcggcgttcaacgagttcgtgcagcagcgccgg
aaggaggaggcggaggcggcgcgcgcggcgcgcatggccgccaaggagggcttctacgag
ctgctggacggctgccgcgctctggacgcgctgcccaagttcagccgcgcgcgcgacgaa
ctggagctggacccgcgctggctggcggtggcctcggcgcgcgagcgcgaggagctgttc
gaggactgggtggaggagcgcgcgcgcgcggagaaggagcggcaccgcctggagcgcaag
cgcgcacagaacgcgctgcgcgacctgctggagggcgcgtcgtggctggtggcgggcacg
ccctggcgccgcgcccaggaccggctggcgggggtgccggagttcgaggcggtggacgcc
gcggggcggctggaggtcttccgcgaggtcatggaggaggtggagaagcgggagaaggag
gccgcggcgcgggcgcgggaggagctggtgcgctcagagcgcgccaaccgcgccgccttc
cgcgagctgctggccgacctgcgcgcgcgcggcgcggtgcacgcgcgctcgcgctggagg
gaggcgctggccctggtcgaggcggaaccggcctacctcgccgtagagcgcaacaccacg
ggctcccgcccccgggagctgtttgaggatctgctggaggacatggagaaggcgtacctg
gaggaccgggcggagatcaaggccgtggtcgcggagcgtggcctcgtggttgacatcgac
tccaagctggaggacttcctggcggcgctgggcagagcggcccccgccgaggcagccccg
gccggcaaggacggcgctgcggctgacggcatggaccggggcgacggggagggcaaggac
gtcagcgcaggggaggtcactgtcgcccagggggcacaagcgctgggcgcaggggccgag
ccagccctgcccgactccatccccacccagagcctgcagctctacttcgtggagcagcag
gggctggcgcgggatgagatcgcgaagagggagaaggagcaccggtaccagcgcgaggac
ttttctcgccttctacgccacgagcgccggatagaggcggagacgccctgggaggatgcc
gtgcagctgctggaaaaggagccggagtggaaggagcttgagagcctggaggagaagcgg
gagctcttcgatgccttcatcgccaagctcaaggccaaggaggcggagcgagcggagcgc
aagaagtcgcggcgggatgatgaccggtcagacgacgagcgcagggacaggaagcggcac
aagcacaagaaggacaggaagaggcatcacggcgacagtgaggatgagcgggacgggaag
cgcgaccggcggagcagggacaggagccgcagcgagagccaacggcgatcgatggaggag
tgcagggtggtaatcctgggcgccgaaatggaggcattgcagctggtgagcctgctgccg
cgctctctgcagcagcagtgcatggtgttagaccatgccgggtcctggctcagccgctgg
accacggcgtggcggggactgggcatccagcacctgcgcagccccgtgacccatcacccg
ggccccgagcctggagccttttccgcttggatagagaagcagggcagatcaggggagctc
ctggaagccgtgcccggctactcccccctgcccacagcacgcctgctggaggactactgc
ctgtccaaggtagtgaaggccctcccgccctgcctccagcgcatccggcaggacaccctg
gagcgcgtggagcccacgccgtaccaaggcacggcttctgaatcggacggctgcctgttc
aactcgcgccccgattcattattccttgatgcctgccaggtcacccacctcccacctctc
tccttcatgtttgacccaggcggactgacgctacacctgggctccggcgccgaggttctg
acccgcgccctggtggtgtcgcgcgtcgacagccgccccctcatcccgccctgggccgca
gacttggtcgacagggagggcacggcggtacgcagcgcgcaccgcctgcgcctggccgag
gaggagctggcgggcaggagcgtggccgtggtgggcgggggcatgacctcagtgaccctg
gcgctcgctgccgcggcaaggggggcgcgggcggtcaccctggtcgcgaggaggccactg
aggcaggcgcccttcgaggtgggggtggggtggcagggccccaagctgatggtgcccttc
gccggtcaacccgaccccgcgaccaggctggcggcctgccgcgccgcgcgtgcgggggcc
accatcaacggccccgcctgggaggtcctggccgcagccgtgcggcgcggcgatgtggcg
gtgcgggaggggcgcaccgtcgagcgcgtggcgcgagagggcgacgctggcggcggtctg
gaggtgcgactggaggccacccgcggcctgcacggcgcttgcgcctcggcgctgccagcc
tccgatccctcacctgggtcaaatgaaggcgaaagcttgacggtggacgaggtgtgggtg
gcgtgcggcgcagcgaccgtgccggccgactcggcgcccttcaccgtgctggacgccctg
agcctcccggggggcctatttgtgggcgggtacccgcgctgcgacgacgccagccttgtg
ctgccgggcgcgcccgtgtatgtgctgggccggacggcgatgctggcctgcggccccacc
gcaggcacgctgggcgggaaccgcgaggcggccaagcgcgtggcggccagcctggcgcga
ctggacatggcaggcgagaaagcgtggcacgcggccgccggcaagctgcaggccgcgccg
gcgcccaggctggagctgctgccgccgccggaggcggagggcgccatgtggcaggctccc
aggaagaaggtgcctgtggcgcgggagcccgacaggatcgatgtgtcggaccttcccccc
aatcttcctcgcaaggagctggggcagtatcggatgatagacgaagggtttgacctgaca
ctggtactgcaactggaggagccagtgaccaaggaccaggtgctgcgggtcaggacggcc
tttgactggcagtcgcttgaagtgtgggctgttggccagattcaggccttccacctgcac
gttcccaagctttggggccgcatcctgccgggcaagtgcggcataaaggtgaatgtgcgg
accaagaagctgtttgtgtgtctgtacaaggagaccgacgccgagtggcggtacctcaag
ggcttttag
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