Auxenochlorella protothecoides: F751_6842
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Entry
F751_6842 CDS
T04132
Name
(RefSeq) Coatomer subunit beta'-1
KO
K17302
coatomer subunit beta'
Organism
apro
Auxenochlorella protothecoides
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apro04131
]
F751_6842
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apro04147
]
F751_6842
Membrane trafficking [BR:
apro04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
F751_6842
Exosome [BR:
apro04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
F751_6842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
WD40
WD40_Prp19
Beta-prop_EML_2
TPR_COPA_B
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
23618233
NCBI-ProteinID:
XP_011396752
UniProt:
A0A087SDS0
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MNVFSQRSERVKGVDIHPTEPWILASLYNGNVYIWNYVEGALVKSFEITDLPVRTAKFIP
RKQWMVCGADDMHVRVYNYNTMDKVKQFEAHTDYIRHLAVHPTLPYLLTCSDDMLIKLWD
WEKGWVNTQVFEGHSHYVMHVVFNPKDPNTFASASLDRTVWGIGSHMPNFTLEGHEKGVN
CVDYYTGGDRPYLASGADDRLVKVWDYQTKACIQTLDGHAHNITAVGFHPELPLLLTGSE
DGSVKAWHSTTYRLEHSLDHGMERVWAVAYTRGSNSIAIGYDEGCVMVKLGRDEPVASMD
AGGKVVWARHNEIQTVNIKSLGDAHEEKDGERLPLAVKDLGSSEQYPQYLAHSPNGRFVA
VCGDGEYVIYTALAWRNKAFGAALDFAWSDDSNTFAIRESSTVVKIFRNFKEAQTLRLPY
SAEGIHGGSLLGVRTPDAITFYDWAGGAVVRRIEAEVRAVHWSEGGAGVALVGPAATHIL
EYSREAAEAALASGEGVDEDGVESAFELVGEIGEPATSAVWVGDCLAFTTSSWRIAYAVG
GETTTLAHADRPLYLLGYLAAAGRLYAVDRAGAVVAYTLLLPVVEFKTRVLRGDVDGARA
LLPTVPEAEHAALARFLEARGHLEAAAEVATDPAHRFDLALALGRLDSAAALAAESGSAL
AWRALGEAALAAGDLGAALLARTYRPSRAGEVVVRWQADLARANPKAAEALANPDDYPNL
FPGWSEALEAERAVYGAVGAGEEQGVGMGAGAEEAGVDEGADSEEAGAGAAPAVGAAAVG
SAIGLASGPIRGAKEAAASNGAPAAGQAYAFHDDPASAEEEAEAFGTEAEGFVGGGSADW
GEEPEAEAPVVEAPALAPAVRLAPEEEDELSAALGALTPDEEALLAEEGLDDEDLAGFGD
ADEDGLDEGAGDFSDDWGLDEGAKRD
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgttctcgcagcggtcggagcgggtgaagggggtggacatccaccccaccgag
ccctggatccttgcctctctgtacaatggcaatgtgtacatctggaactacgtggagggt
gccctggtcaagtcctttgagatcacagacctgccggtgcggaccgccaagttcatcccg
cgcaagcagtggatggtctgcggcgccgacgacatgcacgtccgggtgtacaactacaac
accatggacaaggtgaagcagttcgaggcacacaccgactacatcaggcacctggcggtg
caccccacgctgccctacctgctcacctgctcggacgacatgctgatcaagctgtgggac
tgggagaagggctgggtcaatacacaggtcttcgagggacactctcactacgtcatgcac
gtcgtgttcaaccccaaggaccccaacacctttgcctccgcctccctagatcgcaccgtg
tggggcatcggcagccacatgcccaacttcacgctggagggccacgagaagggcgtcaac
tgcgtggactactacacaggaggcgaccgcccgtacctggcctccggcgccgacgaccgc
ctggtgaaagtgtgggactaccagaccaaggcctgcatccagaccctggacgggcacgcc
cacaacatcacggcggtgggtttccaccccgagctgccactgctgctgaccgggtcggag
gacggcagcgtcaaggcctggcactccaccacctaccgcctggagcacagcctggaccac
ggcatggagcgggtgtgggcggtggcctacacgcgcggctccaactccatcgccatcggc
tacgacgagggctgcgtcatggtcaagctgggccgcgacgaacctgtggcctccatggac
gctggggggaaggtggtctgggcgcggcacaacgagatccagaccgtcaacatcaaatcg
ctgggcgacgcgcacgaggagaaggacggcgagcgcctgccgctggcggtcaaggacctg
gggtcctcggagcagtacccgcagtacctcgcgcactcccccaacggccgcttcgtcgcg
gtgtgtggcgacggcgagtatgtcatctacaccgccctggcctggcggaacaaggccttt
ggcgcggcgctggactttgcctggagcgacgacagcaacacctttgccatcagggagtcg
agcaccgtggtcaagatcttccgcaactttaaggaggcgcagacgctgcgcctgccgtac
agcgcggagggcatccacggcggcagcctgctgggcgtgcgcacccccgacgccatcacc
ttctacgactgggccggcggcgcggtggtccgccgcatcgaggccgaggtgcgcgcggtg
cactggtcggagggcggcgccggcgtggcgctggtgggcccggcggcgacgcacatcctg
gagtactcgcgtgaggcggcggaggccgcgctggccagcggcgagggcgtggacgaggac
ggcgtggagtcggccttcgagctggtgggcgagattggagagcccgccaccagcgcggtc
tgggtcggcgactgcctggccttcaccacgtccagctggcgcatcgcctatgcggtgggc
ggggagaccaccaccctggcccacgccgaccgcccgctctacctcctgggctacctggcg
gccgcggggcggctgtacgcggtggaccgtgcgggggcagtggtggcctacaccctgctc
ctgccggtggtggagttcaagacgcgcgtgctgcgcggcgacgtggacggcgcgcgcgcc
ctgctccccaccgtgcccgaggcggagcacgccgcgctggcgcgtttcctggaggcgcgg
ggccacctggaggcggcggccgaggtggccaccgaccccgcccaccgcttcgacctggcg
ctggcgctggggcggctggactcggccgccgcgctggcggccgagtcggggtcggcgctg
gcctggcgtgcgctgggcgaggccgcgctggcggcgggcgacctgggcgcggcgctgctg
gctcgcacctaccgcccctcgcgcgcgggggaggtggtggtgcgctggcaggccgacctg
gcgcgcgccaacccgaaagccgccgaggcgctggccaacccagacgactacccgaacctg
ttcccaggctggagcgaggcgctggaggcggagcgggcggtgtatggcgccgtcggtgct
ggggaggaacagggagtgggaatgggtgccggagccgaggaggctggggtggacgagggg
gccgatagcgaggaggccggtgccggtgccgctcctgcagtcggcgcggcggcagtgggc
agcgcgattggactcgcctctggccccatccgcggcgccaaggaggcagccgcgtcaaac
ggcgcgccggccgcgggccaggcgtacgccttccacgacgaccccgcgtcggctgaggag
gaggcggaggcttttgggaccgaggcggagggttttgtaggcgggggctcggccgactgg
ggcgaggagccggaggccgaggcgccagtcgtcgaggcgcccgcgctggcgccggcggtc
cggcttgcgcccgaggaggaggacgagctgtcggccgcactcggggcgctgacgccggac
gaggaggcgctgctggccgaggagggcctggacgacgaggatctggccgggttcggggac
gccgatgaggatggcctggacgagggggcgggcgacttcagcgacgactggggcctggat
gagggggccaagcgcgactga
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