Auxenochlorella protothecoides: F751_6986
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Entry
F751_6986 CDS
T04132
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
F751_6986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apro03041
]
F751_6986
03009 Ribosome biogenesis [BR:
apro03009
]
F751_6986
Enzymes [BR:
apro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F751_6986
Spliceosome [BR:
apro03041
]
Complex A
U1 snRNP components
U1 related factors
F751_6986
Complex B
F751_6986
Ribosome biogenesis [BR:
apro03009
]
Eukaryotic type
Pre-60S particles
Helicases
F751_6986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
DEAD
Helicase_C
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
ResIII
HAD_Pex22
NAD_binding_10
RecO_N_2
Motif
Other DBs
NCBI-GeneID:
23618377
NCBI-ProteinID:
XP_011401232
UniProt:
A0A087SR65
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MLRDVYKRMIADFRDVPALEKNFYYEHPDVTARSDGEVERYRAERDIHVGGEGVPKPVTT
FEEASFPEYVLHEVAKAGFKEPTPIQAQGWPMALLGRDLIGIAETGSGKTLAYLLPAVVH
INAQPHLSPGDGPIVLALAPTRELAVQIQSECLKFGSSSRIKSTCVYGGAPKGPQGNDLR
RGVEIVIATPGRLIDFLEGRTTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDRQT
LLWSATWPKEIQALASEFLTKPYQVTIGSSDLKANHKIEQAFDFVSEHEKLPRLLRLLER
EMDGRRVIVFCETKRGCDAVTRQLRQDGFPALSIHGDKTQQERDWVLAEFKNGKHPIMLA
TDVAARGLDVKDIKLVVNYDMPGSAEDYLVAMAVEEYVPRSILITGGAGFIASHVTIKLV
KRYPHVKVVVLDKLDYCATLENLKSIRDCPNFKFVKGEIQSTDLIVHILETEEIDTVMHF
AAQTHVDNSFGNSLAFTMNNTYGTHVLLESARLYGKIRRFLNVSTDEVYGETSLGKAEGL
SEASALEPTNPYSAAKAGAEMMARAYHTSYKLPVIVTRGNNVYGPHQFPEKMIPKFILRA
QRGEKLPIHGDGMSVRSYLYVEDVAEAYIIVMLKGTVGETYNIGTQKERTVVDVATDIAK
HFGLPANSIVHVRDRAFNDRRYFICDKKLLDLGWSETVDWKEGLKRTIDWFLEHGQPEYW
SNGNMEAALEAHPTLQHSTAVPVRIH
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgctcagggacgtctacaagcgcatgatcgcagacttccgggacgtccccgccctggag
aagaacttctactacgagcaccccgacgtgacggcgcgcagcgacggcgaggtggagcgt
taccgcgcggagcgcgacatccacgtcggcggcgagggcgtgcccaagcctgtgaccacc
ttcgaggaggcctccttccccgagtacgtgttgcacgaggtggccaaggccgggttcaag
gagcccacccccatccaggcccagggctggcccatggcgctgctgggccgcgacctgatt
ggcatcgcggagacggggtcgggcaagaccctggcctacctgctccccgcggtggtgcac
atcaacgcgcagccccacctgtcccccggcgacggccccattgtgctggcactggcgccc
acgcgcgagctggcggtgcagatccagagcgagtgcctcaagttcggcagctcctcgcgc
atcaagagcacctgcgtgtacggcggtgcgcccaagggcccgcagggcaacgacctgcgg
cgcggggtggagatcgtgattgccacccccggccgcctcatcgacttcttggaggggcgg
accaccaacctgcgccgcgtgacctacctggtgctggacgaggcggaccgcatgctggac
atggggttcgagccccagatcaggaagattctcggccagatccggcccgaccgccagacc
ctgctctggtccgccacctggcccaaggagatccaggccctggcctccgagttcctgacc
aagccctaccaggtgaccattgggtccagcgacctcaaggccaaccacaagatcgagcag
gccttcgacttcgtgtcggagcacgagaagttgccgcgcctgctgcgcctgctggagcgc
gaaatggacggccgccgcgtcatcgtcttctgcgagaccaagcgcggctgcgacgcggtc
acgcgccagctgcgccaggacgggttccccgccctctccatccacggagacaagacgcag
caggagcgcgactgggtgcttgccgagttcaagaacggcaagcaccccatcatgctcgcc
accgacgttgcggcgcgaggcctggacgtcaaggacatcaagctggtggtgaactacgac
atgcccggcagcgcggaggactacttggtggccatggccgtcgaggagtacgtcccgcgc
agcatcctcatcaccggcggagctgggtttattgccagtcatgtcaccatcaagctcgta
aagcgctaccctcatgtcaaggtggttgtcctggacaagctcgactactgcgcgacgctg
gagaacttgaagtccatccgggactgccccaacttcaagttcgtgaagggagagatccag
tccacggacctgatcgtgcacattctggagaccgaggagatcgacaccgtcatgcacttt
gccgcccagacccatgtggacaactccttcgggaacagcctggcgttcaccatgaacaac
acctatggcacccatgtcctgctcgagtccgcccgcctgtacggcaagatccgccgcttc
ctcaacgtctctaccgatgaggtctacggcgagacctcgctggggaaggccgagggcctg
agcgaggcctctgccctggagcccaccaacccctactcggcggccaaggccggtgccgag
atgatggcgcgcgcttaccacacctcttacaagctccccgtcatcgtcactcggggaaac
aacgtgtacgggcctcatcagttcccggagaagatgatccccaagttcattctgagggct
cagcgtggcgagaaactgcccatccacggcgacggcatgtcggtgcggtcctacctgtac
gtggaggacgtcgcggaggcctacatcatcgtcatgctgaagggcacggtcggcgagacg
tacaacattggcacgcagaaggagcgcaccgtcgtggatgtggcaaccgacatcgccaag
cactttggcttgcccgccaactccatcgttcatgtccgcgaccgcgccttcaacgaccgc
cgctacttcatctgcgacaagaagctgctggacttgggctggagcgagacggtggactgg
aaggagggcctgaagcgcaccatcgactggttcctggagcacgggcagccggagtactgg
tccaacggcaacatggaggcggcgctggaggcgcaccccaccctgcagcactccaccgcc
gttcccgtccgcatccactga
DBGET
integrated database retrieval system
