Aminirod propionatiphilus: KIH16_09820
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Entry
KIH16_09820 CDS
T10987
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aprp Aminirod propionatiphilus
Brite
KEGG Orthology (KO) [BR:
aprp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aprp03032
]
KIH16_09820 (topA)
03400 DNA repair and recombination proteins [BR:
aprp03400
]
KIH16_09820 (topA)
Enzymes [BR:
aprp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KIH16_09820 (topA)
DNA replication proteins [BR:
aprp03032
]
Prokaryotic type
DNA Topoisomerases
KIH16_09820 (topA)
DNA repair and recombination proteins [BR:
aprp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KIH16_09820 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
DZR
DNA_ligase_ZBD
C1_1
ZF-HD_dimer
Auto_anti-p27
Zn_ribbon_GRF
Motif
Other DBs
NCBI-ProteinID:
QVL35486
LinkDB
All DBs
Position
complement(2132880..2134964)
Genome browser
AA seq
694 aa
AA seq
DB search
MAKKTLVIVESPTKAKTLSKMLGRNYEIKASMGHVRDLPKSRLGVLVEEDFAPEYILVRG
KGSVVKELKSRAKGADRILLASDPDREGEAIAWHLAFILGIDPAAACRIRLFEITKQGVK
EAVAHPEPIDLRRVDAQQARRVLDRLVGYRLSPLLWNKIRSGLSAGRVQSVALRILCERE
REIEAFKEQEYWLVDVEAGKDDRRYRLRLERRDGKALTLTCAEEAEAAERELRRHPLVVV
DWKAKESRRTPLPPFKTSTLQQEAGRRLGYAPKRTMAVAQSLYEGVEIPGKGPVGLITYM
RTDSLRVSESAQEACRAFIESRWGSDYLPEKANEHKSRGRVQDAHEAIRPTDVTFEPQEI
KAHLSREQFQLYDLVWRRFVASQMAAARLSRTTVDVEAGPFGLRQSGVSLLFQGWGLLWS
LDFKEGIIDGAERGEVLELLDVARTQKFTRPPSRYTESGLVKLLEDKGVGRPSTYAAIVS
TLLDRGYAERGDEKKLVPTELGVVVCDFLVEHFSDLVNTDFTASMEEDLDQVEGGQRQWL
DLVRSFWQTFSVDLAKVEELAPPVELPVREIGENCPDCGSPLVIKRGRFGEFIACSGYPQ
CKYSRPLLKTIGVACPKCKEGEIARRRSKKGRIFYGCSRYPDCDFVSWNEPTSRSCPDCG
AFLEKKKKGRKTILSCSACAYSVEEEGEDHGGQA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaaccctcgtcatcgtcgagtcgccgacgaaggcgaaaaccctctccaag
atgctgggccggaactacgaaatcaaggccagcatgggacacgtgcgcgatcttcccaaa
agccgtctgggcgtcctcgtcgaagaggacttcgcccccgaatacatccttgtccgcggc
aaggggagcgtcgtcaaggagctgaaaagtcgggccaaaggggccgaccggatccttctc
gcctccgaccccgaccgggagggagaggccatcgcctggcatctggccttcatcctcggc
atcgaccctgccgcggcctgccggatccgcctcttcgagatcaccaaacagggcgtcaag
gaggccgtcgcccatcccgagccgatcgacctccgccgcgtcgacgcccagcaggcccga
cgcgttctcgaccgtctcgtcggctaccgcctcagcccccttctgtggaacaagatccga
tcgggcctctcggccggccgcgtccagtccgtggcccttcgcatcctctgcgagcgggag
cgggagatcgaggccttcaaagagcaggagtactggctcgtcgacgtcgaggcgggaaag
gacgacaggcggtacaggctccgcctggagaggcgcgacggcaaggccctgaccctgacc
tgcgccgaagaggccgaggccgccgaaagggaactgcgccgtcaccctctcgtcgtcgtc
gactggaaggccaaggaaagccgccgaacgcctctgccccccttcaagacgagcaccctc
cagcaggaggccggccggcggctgggctatgcccccaagagaaccatggccgtcgcccag
tccctctacgagggcgtcgagattcccggcaagggccccgtcgggctcatcacctacatg
cgcaccgacagcctccgcgtcagcgaatcggcccaggaggcctgccgggccttcatcgag
tcccgctggggctcggactatctgccggaaaaggccaacgaacacaaaagccggggccgc
gtccaggacgcccacgaggcgatccgtcccaccgacgtgaccttcgagccccaggagatc
aaggcccatctcagccgcgagcagtttcagctctacgacctcgtatggcgccgcttcgtc
gccagccagatggctgcggcccgcctctccaggacgaccgtcgacgtcgaggccggtccc
ttcggccttcgccagtccggcgtctccctccttttccagggctggggcctcctctggtcc
ctcgatttcaaagagggaatcatcgacggcgccgaaaggggcgaggttctggagctcctc
gacgtggcacggacccagaagttcacccgtccgccctcgcgctacaccgaatcggggctc
gtcaagctcctcgaggacaagggcgtcggccgtccctcgacctacgcggccatcgtctcc
acccttctcgacagggggtacgccgaaagaggggacgaaaagaaactcgttcccaccgag
cttggcgtcgtcgtctgcgacttcctcgtcgaacacttctccgatctcgtcaacaccgat
ttcacggcctccatggaggaggatctcgaccaggtcgaggggggacagcggcagtggctc
gacctggtccgctccttctggcagaccttttccgtcgatctggccaaggtggaggagctg
gcccctcccgtcgagcttcccgtgcgggagatcggcgaaaactgtcccgactgcggctct
cccctcgtgatcaagcgggggcgcttcggcgagttcatcgcctgttcgggctacccccag
tgcaagtacagccgccccctcctcaagaccatcggcgtcgcctgccccaagtgcaaggag
ggagagatcgcccggcggaggagcaagaaggggcggatcttctacggctgctcccgctat
cccgactgcgacttcgtgagctggaacgagcccacctccaggtcctgccccgactgcggc
gccttcctggagaaaaagaagaaggggcgcaagacgatcctctcctgctcggcctgcgcc
tattccgtcgaagaggagggggaagaccatggcggccaggcctga
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