Aminirod propionatiphilus: KIH16_13595
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Entry
KIH16_13595 CDS
T10987
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aprp Aminirod propionatiphilus
Pathway
aprp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aprp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
KIH16_13595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprp03019
]
KIH16_13595
03009 Ribosome biogenesis [BR:
aprp03009
]
KIH16_13595
04131 Membrane trafficking [BR:
aprp04131
]
KIH16_13595
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aprp04147
]
KIH16_13595
Messenger RNA biogenesis [BR:
aprp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
KIH16_13595
Ribosome biogenesis [BR:
aprp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
KIH16_13595
Membrane trafficking [BR:
aprp04131
]
SNARE
SNARE associated proteins
Others
KIH16_13595
Autophagy
Aggrephagy
Other aggrephagy associated proteins
KIH16_13595
Exosome [BR:
aprp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KIH16_13595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
TIP49
AAA_14
AAA_22
AAA_5
AAA_lid_PRS2_C
AAA_28
AAA_33
nSTAND3
DUF815
RNA_helicase
Zeta_toxin
AAA_3
Mg_chelatase
AAA_17
AAA_19
AAA_7
IstB_IS21
TsaE
AAA_18
NPHP3_N
NB-ARC
AAA_25
ATPase_2
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QVL36144
LinkDB
All DBs
Position
complement(3052022..3054148)
Genome browser
AA seq
708 aa
AA seq
DB search
MGKINNSVFIVAESNLKDVGRGIVRIDPVDMEIMGVSVGDVVQIEGERQTIAKIMPTFPQ
DRGKRIIQMDWTLRNNAKTSLNNNVNVIKIDFKLAEKIVIAPLSNVRIPLGDKDISYIGS
ILTGLAVIEGDFIRVNFMGNRNQDFLVNNTTPGGPVLISQKTRILLDKIQQNSTKRSKIS
YEDIGGLSRELKKIREMIELPLKCPRLFDRLGIDPPKGVLLYGPPGCGKTLIARAVASET
AAYFVHVTGPEIMGKFYGESEARLRGFFEEARKNAPSILFIDEIDAIAPKREEMGGEKQV
ERRVVAQLLALMDGLESRGDVIVIGATNIPNALDPALRRPGRFDRELEIAIPDQRDRLEI
LSIHVRGMPLASDVDLERLSRVTHGFVGADMEALCREAAMSVLRRVVPDYTCRIEEVADI
DILQMEVMMDDFLGALKEVEPSAIREVFVEVPDVSWEDVGGLREIKRQLSEAVAWPLKHG
ELLASVGLRPPKGILLSGSPGLGKTLVVKAMANESEINFISVKGSELLSKYVGESEKGVR
EVFRKARQASPCILFFDEFDSLVPLRHSFGDSQVIDRVISQFLSEMDGIEELKDVLVLAA
SNRQDLIDPAIIRPGRFDLILNFNLPDKDDRIEILKIHSKKMPLDGDVSLEEISMRTEDF
SGAELKQLCQEAARLALREYMASNGENKIVILKNHFDLAINSIMERKR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatcaataattcagtatttattgtagctgaatctaatttaaaagatgtcggg
agaggaattgttcgcatagaccctgtagatatggaaataatgggtgtaagtgtaggcgat
gtggttcagattgaaggagaaaggcaaactatagctaaaataatgcctacttttccgcaa
gatcgaggaaaaagaataattcaaatggattggactctaagaaacaatgcaaaaacgtca
ttgaacaataacgtcaatgtaataaagatagattttaaattagcggaaaagattgtcata
gctcctttgtcaaacgttcgtattccacttggagataaggatatttcctatataggatcc
attttgacaggtcttgccgttatagagggtgatttcataagagttaactttatgggaaac
aggaatcaggattttttggtcaataataccactcctggcggacctgtccttatttcgcaa
aaaactcgtattttattagataaaattcaacaaaattcaactaaaagatccaaaatatcc
tatgaagatataggtggattgtcaagagagcttaaaaaaatacgagaaatgatcgaactt
cctctgaaatgtccccgccttttcgatcgactgggtatagatcccccgaagggggtattg
ctctatggtcctccgggctgtggaaaaaccctgatcgccagggctgtcgccagtgaaacg
gcagcgtatttcgtccatgtgacggggcctgaaattatgggcaagttttatggtgagagc
gaggccaggttgaggggcttttttgaagaggccagaaagaatgccccgtcgattcttttt
atcgacgagatcgatgccattgcccccaagcgggaggaaatgggcggggagaaacaggtg
gagaggcgggtggtcgcgcagctgttggctctgatggatggcctagagtcgcgcggtgac
gtcattgtcatcggtgcgacgaatatacccaacgccttggatccggcgcttcgtcgcccg
ggacggtttgatcgggagctggagatcgccataccggaccagagggacaggttggagata
ttgagcatccacgttcgaggcatgccgctcgcctccgatgtcgatttggagaggttgtcg
cgagtgactcacggttttgtcggtgccgatatggaggccctgtgtcgggaggcagccatg
agcgtcctgcggagggtcgttcccgattacacctgtcggatcgaagaggtcgccgacatc
gatattttgcaaatggaagtgatgatggacgacttccttggtgccctcaaagaagtggaa
ccatcggccattcgggaggttttcgtggaggtgcccgacgtgagctgggaagatgtcggt
ggccttcgcgagatcaagaggcagctttcggaggcggtggcttggccgcttaagcatggc
gagctgcttgcgagcgtggggcttcggccgccgaagggcatcttgctctcggggtctccc
ggattgggtaaaacgttagtggtgaaggccatggccaacgaaagtgaaattaatttcata
tccgtaaaaggctcggagcttttgtctaaatatgttggagagtcggaaaaaggagttcga
gaggtatttcgtaaagcgagacaggcaagcccttgtattttatttttcgatgaatttgat
tcattggtccctctaagacattcttttggagattctcaagttattgatcgagtaatcagc
caattcctctccgaaatggatggaattgaagagctcaaagatgttttagttttagctgca
agcaataggcaagatttgatagatccagcgatcattcgcccgggcagatttgatctaatt
ttaaatttcaatcttccagataaagatgatcggatagaaatccttaagatacatagcaaa
aaaatgcctttggatggcgatgtctcgcttgaagaaatttctatgcgtacagaagatttt
tctggagcagagctcaagcagttatgtcaagaagcagctcgcttggcgttaagagaatat
atggcttcaaacggtgaaaataaaattgttatacttaaaaatcattttgatttagccatt
aatagtataatggaacgcaagaggtga
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