Acidihalobacter prosperus: BI364_12525
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Entry
BI364_12525 CDS
T04495
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
aprs
Acidihalobacter prosperus
Pathway
aprs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aprs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BI364_12525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aprs03400
]
BI364_12525
DNA repair and recombination proteins [BR:
aprs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BI364_12525
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BI364_12525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_23
AAA_25
RsgA_GTPase
AAA_21
nSTAND3
nSTAND_NTPase5
BCA_ABC_TP_C
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AOU98677
UniProt:
A0A1D8IQE8
LinkDB
All DBs
Position
2610636..2613488
Genome browser
AA seq
950 aa
AA seq
DB search
MDFIRIRGARTHNLKNIDLDLPRERLVVITGLSGSGKSSLAFDTLFAEGQRRYVESLSAY
ARQFLSVMEKPDVDYIEGLSPAISIEQKTTSHNPRSTVGTITEIYDYLRLLYARAGTPHC
PDHDLPLEAQTVSQMVDQILALPEGTRIMLLAPLISGRKGEHAQVLDELRSQGFIRARVD
GEIHELDSTPVLDPKRKHSIEAVIDRLRVRPDIALRLAESFETALRLGEGIARIAFMDDK
QREELVCSSRYACPQCGYSLAELEPRLFSFNNPFGACTTCDGLGIQSFFDPERVVVNPDL
SLAGGAIRGWDRRNEHYYRLVGALAAHYDFDPEVPWNELPAKIRHIMLDGSGRESITFTE
RDARGKAVKRSHPFEGILPNMARRYRETESSAVREELGRYLSSRQCADCGGSRLNRAARH
VFVGERPLPELTRTPIEQALAFFTQLDLPGRRGQIASKIVKEIVARLSFLVNVGLDYLTL
ERSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNQRLLDTLARLRDLGNS
VIVVEHDEDAIRAADHVVDIGPGAGLHGGRVIAEGTPDAVAANPASLTGQYLSGQRSVAV
PEQRHIPDEDAWLTVKGARGNNLKGVDMAIPLGLLTCVTGVSGSGKSTLVNDTVYRLLAK
HFYGASEEPAAFDAVEGLEHLDKIVAIDQSPIGRTPRSNPATYTGLFTPIRELFAGTAEA
RSRGYTPGRFSFNVRGGRCEACQGEGFTKVEMVFLADIYVPCDVCKGQRYNRETLSVPYK
GKNVHEVLQMTVEDALTFFAPVPVVHRKLQTLMDVGLSYITLGQSATTLSGGEAQRVKLA
KELSKRATGRTLYILDEPTTGLHFHDVDQLLGVLHQLRDQGNTIVVIEHNLDVIKTADWV
IDLGPEGGDGGGEIIAAGTPEIIAATTGSYTGQFLKPLLKRGQTRPRKRA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggactttatccgcatccgcggtgcccgcacccataatctcaaaaacatcgatcttgac
ctgccgcgcgagcggctggtggtgattaccggactatcgggctctggcaaatcttcgctc
gccttcgacactttgttcgcggaaggccagcggcgctatgtggagtctttatcggcctac
gcgcgccagttcctgtcggtgatggaaaagcccgacgtggactatatcgagggcttgtcg
cccgcgatctccatcgagcagaaaaccacttcgcacaacccccgctccaccgtgggcacc
atcacggagatctacgactacctgcggctgctgtacgcacgggccggcacaccgcattgc
ccggaccacgatctgccgctggaggcacagaccgttagccagatggtcgatcagatcctc
gccctgccggagggtacgcggatcatgctgttggcgccgctgatttccgggcgcaaaggc
gagcatgcacaggtgctcgacgagctgcgcagccagggtttcatccgcgcgcgggtcgac
ggcgagatccatgagctcgacagcacgcccgtcctcgatcccaagcgtaagcacagcatc
gaggccgtcatcgaccgactgcgcgtgcgaccggacattgcgctgcgacttgccgaatca
ttcgaaaccgctctgcgcctgggcgagggcatcgcacgcatcgccttcatggacgacaaa
cagcgggaggaactggtctgctcttcgcgttacgcctgcccccaatgcggctattcgctt
gcggagcttgagccacggctattttcattcaacaatccattcggcgcctgcacgacttgc
gacggtctcggcatacagtctttcttcgatccagagcgcgtggtcgtcaatcccgacctg
agtctcgccggtggcgccatccgtggctgggaccggcgcaacgagcactactaccgcctg
gtcggggcgcttgccgcgcactacgatttcgaccccgaagtcccctggaatgaattgccc
gccaagatacgccacatcatgctcgacggcagcgggcgcgagtccatcactttcaccgag
cgcgacgcacgcggcaaggcggtcaagcgcagccaccccttcgagggcatattgccgaac
atggcgcggcgctaccgtgaaaccgagtcgagcgcggtgcgcgaggaactcgggcggtac
ctgtctagccggcagtgcgcggactgcggcggcagccgtctgaatcgtgccgcccggcat
gtgttcgtgggcgaacgcccgctgcccgaattgacccgcacgccgatcgaacaggccctg
gccttcttcacgcagcttgacctgccgggtcggcgcggccagatcgcgagcaaaatcgtc
aaggaaatcgtggcccgcctcagctttctggtgaacgtgggtctggattacctcacgctg
gaacgcagtgcggacacactctccggtggcgaggcgcagcgcatccggctggccagtcag
atcggtgccggactggtgggcgtaatgtatgttctggacgagccctccatcggcctgcac
cagcgcgacaaccaacgcttgctcgacaccctcgcccgcctgcgcgatctcggcaacagc
gtgatcgtggtggaacacgacgaggacgcgattcgcgccgctgaccatgtcgtcgacatt
gggcccggagctggtctacatggcggtcgcgtgatcgcagagggtacgcccgacgctgtg
gccgccaaccccgcctcgctgaccggacagtatctctccgggcaacgcagcgtcgcggtt
cccgagcaacggcatatcccggacgaagatgcctggctaaccgtcaaaggcgcccgcggg
aacaatctaaaaggtgtagacatggcaatcccgctgggtctgctcacctgcgtgaccggc
gtttccggttccggcaagtccaccttggtcaacgacaccgtgtaccgcctgcttgccaag
cacttctacggcgccagcgaggaaccggccgcctttgatgccgttgagggactcgaacac
ctggacaaaattgtggccatcgaccagagcccaatcggacgcacgccacgctccaatccg
gccacctatactggcctcttcacacccattcgcgagctattcgcgggcaccgccgaagcg
cgatcgcgcggctacacgccaggacgcttcagcttcaacgtacgcggtggacgctgcgaa
gcctgtcagggcgagggctttaccaaggtcgagatggtctttctggctgatatttacgtg
ccctgcgatgtgtgcaagggacagcgctacaaccgcgaaaccttgagcgtgccctacaag
ggcaagaacgtgcacgaagtgctccaaatgacggtagaggatgcacttacattcttcgca
ccggttcccgtcgtgcaccgcaagttacaaacgctgatggacgtcggcctttcgtatatt
accctcggccaaagcgcaaccacgctctccggcggtgaggcgcaacgcgtcaagctcgcc
aaggaactgtccaagcgagccaccggacgaacgctttacatactcgacgagcctaccacg
gggctgcacttccacgatgtggaccaattgcttggggtgctgcaccaactgcgcgatcag
ggcaatacgatagtcgtcatcgagcataacctcgatgtcatcaagacggccgactgggtg
attgaccttggcccggagggcggtgatggcggcggtgaaatcattgcggcgggcaccccg
gaaatcatcgcggctacaacgggctcgtataccggccaatttctaaaaccgctgctcaaa
cgagggcaaacccgcccgcgtaaacgtgcctga
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