Acidihalobacter prosperus: BI364_15030
Help
Entry
BI364_15030 CDS
T04495
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aprs
Acidihalobacter prosperus
Pathway
aprs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aprs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BI364_15030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aprs03400
]
BI364_15030
Enzymes [BR:
aprs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BI364_15030
DNA repair and recombination proteins [BR:
aprs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BI364_15030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AOU99080
UniProt:
A0A1D8IRF3
LinkDB
All DBs
Position
complement(3104542..3108174)
Genome browser
AA seq
1210 aa
AA seq
DB search
MMRPLDTQTFPLQGVQLIEASAGTGKTYTIANLYLRLVLECQLPVPQILVVTFTKAATQE
LRARIRARLHEARQRLLSGAVCDDGDLGSLVLRATSGVVAQGTRLDAAAATALLDAALTH
MDEAAVYTIHGFAQRMLTDHAFESGAPFEAELLGDEQNLRRAAVEDFWRRRFYGAPEDDV
AWASAEWGTPEGLYRQIAALLGRDAARLLPEDIADIVQTLATRWATLRTGLIDAWAAEGE
AACEQLRASPALNRNRYRAASVMRAIDALADWLGGNPSQGELPERIDLFTPAKLTLATKK
GHDTPSGPLFDLCAELEALAPRLARARRAVLLREAVCFTREAVATHKRARRLLAYDDLLS
QLDAVLSGEDGAALAERIRARFPIAMIDEFQDTDPLQYRIFSAVYAVADAAQPAETASTQ
PASGERAECARANALFMIGDPKQAIYGFRGADIFAYFKAQREAGEHAYTLTTNWRSGSAL
IDAINRLFGACERPFVFEEIGFHPVQASITADATPLLLNGVAPPPLMCWWLGHDAKPPRP
SALMPSVAAACAHEIARLLACAEAGDACLGDRPLVARDLAVLVRDRVEARIVRTALAHAG
IASVFLTRDSIFATAEAEALRRLLRAVAEPGDARALRAALATDLIGANATALEALNHDEA
TWESWLGHFQRAQMHWREHGFMAMFTQLLGDCAIAHRLLAEPDGERRMTNLLQLGELLAV
AAGERSGFESLLRWLDARIADPDGEDEAQQLRLESDESLVQVVTIHASKGLEYPLVFLPF
PWRVRAIDPDKANDDGKPFLFHAQEDETLCADLGSEARVAHAKRAEQERLAEDLRLLYVA
LTRARQRLYLSWGAVAGAEQSALAWLLHGGVGMIGQDEAAIRADLFRLNAGGERLELREL
PSDRAVPLPPVDAAVRRARRFAGRVDAGWRVTSYSGLVADHGTRPELPDYDAVALDEVSS
NPPARTVRDAFAFPRGARAGLFLHALLERLDFPQAQGEILAQAVRAGLQLHGFAADWQPA
IEALVRQVLDTPLDDAGLRLRDIARTDRRDELAFYYPFAPLSSRALNTLLARRGSLALDG
AGLSFNPLRGMMKGFIDLVFRRDGRYYLADYKSNHLGDRAEDYAQGNLAEAMREHRYDLQ
YLIYCVALHRHLRARLPGYDYARDFGGVFYLFLRGMRPADGPRLGVYHDRPESGLIDALD
ALFTGEAGGA
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggccgctggatacgcagacctttcccctgcagggcgtacagctcatcgaggcc
agcgcgggcacgggcaagacctacaccatcgccaatctctacctgcgtctggtgctggaa
tgtcagctgccggtgccccagatcctggtggtgaccttcaccaaggccgccacgcaggag
ttgcgcgcacgcatccgggctcgcctgcacgaggcccgtcagcgactcctgagcggcgcg
gtttgcgacgacggcgatctgggcagcctcgtgctgcgcgccacgagcggcgtcgtggcg
caggggacgcgcctcgacgccgccgccgcgacggcgctgctcgacgccgcgcttacgcat
atggacgaagcggcggtctataccattcacggtttcgcccagcgcatgctcaccgaccat
gccttcgagagcggcgcgcccttcgaggccgagctgttgggcgacgagcagaacctgcgc
cgcgcggcggtcgaggatttctggcgccgtcgcttctacggtgcgccagaggatgacgtt
gcctgggcctctgccgaatggggtacgccggagggcctgtatcggcagattgcagccttg
ctggggcgcgatgccgctcgcctgttgccggaagacattgcggacatcgtgcagaccttg
gccacccgttgggcgacgctgcgcacaggcctgatcgatgcctgggccgcagaaggagag
gccgcgtgcgagcagctgcgggccagtcccgcgctcaaccgcaaccgctaccgtgccgcc
agcgtgatgcgggccatcgatgccctcgccgattggttgggcggcaatccatcgcagggc
gaactgcccgaacggattgatctgttcaccccggccaagttgacgctggcgaccaagaag
ggccacgacaccccatccggtccgttgttcgatctgtgcgcggaactcgaagcattggcg
ccgagactggcccgtgcgcgccgtgcggtgctgctccgcgaggccgtgtgcttcacgcga
gaggcggttgcgacgcacaagcgggctcgccgcctgctggcctacgacgacctgctgagt
cagctcgatgcggtgctgtcgggggaggacggcgcggccctggccgaacgcatccgcgcc
cgtttccccatcgccatgatcgatgaattccaggacaccgatccgctgcagtaccgtatc
tttagtgccgtgtacgccgtggcggatgccgcgcagcccgcggaaacggcatccactcaa
ccggcaagcggtgagcgcgcggaatgtgcgcgcgccaatgccctgttcatgatcggcgac
cccaagcaggccatctatggcttccgtggtgccgatatctttgcctacttcaaggcccag
cgcgaagcgggggagcatgcctacaccctcacgaccaactggcgttccggtagcgcgctg
atcgacgccattaaccgcctgttcggtgcatgtgagcgcccgttcgtgttcgaggagatc
gggttccatcccgtgcaggcctcgatcacggccgatgcgacgccgctactgctcaatggc
gtggcgccgccgccattgatgtgttggtggctggggcacgacgccaagccgccacgcccc
agcgcgctcatgccctcggtggccgccgcctgtgcccacgagatcgcccgtctgctggcc
tgcgcggaggcgggcgatgcgtgtctgggcgacaggccgctggtcgcacgcgaccttgcg
gtgctggtacgcgaccgcgtcgaggcacgcatcgtgcgcacggcgctggcgcacgcgggc
attgccagcgtattcctgacgcgcgacagcatttttgccacggcggaggccgaggccttg
cgtcgcctgctgcgtgccgtggccgaacccggtgacgcccgcgccctgcgtgcggcgctg
gccaccgatctgatcggcgccaatgcaacggcgctggaggcactcaaccacgacgaggcc
acctgggagtcgtggctcggacacttccagcgcgcacagatgcactggcgcgagcatggc
ttcatggcgatgttcacgcagttgctcggcgattgcgccatcgcgcaccggctcctggcc
gagcccgacggcgagcggcgcatgaccaatctgctgcagctcggcgaactgctcgcggtg
gccgcgggcgagcgcagtggtttcgagtctctgctgcgctggctggatgcgcgcattgcc
gatccggacggcgaggacgaggcccagcagctgcgtctggaaagcgacgagtcgctggtg
caggtggttacgatccacgcctccaagggcctggaatacccgctggtattcctgccgttt
ccctggcgtgtgcgcgccatcgatccggacaaggccaacgatgacggcaaaccctttctg
tttcacgcgcaagaggatgagacgctgtgcgccgatctcggcagcgaggcgcgggtagcg
catgcaaagcgcgccgagcaggaacgtctggcggaggatctgcgcctgctctacgtcgcg
ctcacccgtgcccgccagcgcctctatctgagctggggggcggtggccggcgccgagcag
tccgcgcttgcctggctgctacacggcggggtcggcatgatcgggcaggacgaggccgcg
attcgcgccgacttgttccggctcaacgcaggcggcgaacgcctcgaattgcgcgaattg
ccatcagatcgcgcggtgccgttgccgccggtggatgccgcggtgcggcgcgcgcggcgc
ttcgccggtcgtgtcgatgccgggtggcgcgtgaccagttactccgggctcgtcgctgac
cacggcacgcggcccgagttgccggactatgatgccgtggcgctggatgaggtctcatcg
aacccgcccgcgcgcaccgttcgcgatgcttttgcctttccgcgcggcgcgcgcgcgggc
ttgttcctgcatgccttgctggaaaggctggattttccgcaggcgcagggcgaaatactg
gcccaggccgtgcgtgcaggcttgcagctgcacggcttcgcggcggattggcagccagcc
atcgaggccttggtccgccaggtgctggacactccgctcgacgatgccggtttgcgtctg
cgcgacatcgcccgcacggatcgccgcgacgagctggccttctattatcccttcgcaccg
ctgtcgtcgcgcgcgctcaacacgttgctggcgcgccgtggttcgctcgcgcttgatggc
gcggggctgagcttcaatccgctgcgcggcatgatgaagggcttcatcgacctcgtgttc
cgccgcgacgggcgctactacctcgccgactacaagtccaatcatctcggcgaccgcgcc
gaagattacgcacaggggaatctcgccgaggccatgcgcgagcaccgctacgacctgcag
tacctcatttactgcgtggccctgcaccggcacctgcgcgcccgcctgccgggctacgac
tacgcacgcgatttcggcggcgtgttctatctcttcctgcgcggcatgcgcccggccgac
ggcccacgcctcggcgtataccacgaccgccccgagtccgggctgatcgacgcgctggac
gccctgttcaccggcgaggcgggcggggcatga
DBGET
integrated database retrieval system
