Amycolatopsis sp. FBCC-B4732: MUY14_13040
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Entry
MUY14_13040 CDS
T08335
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
aprt
Amycolatopsis sp. FBCC-B4732
Pathway
aprt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aprt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MUY14_13040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aprt03000
]
MUY14_13040
03400 DNA repair and recombination proteins [BR:
aprt03400
]
MUY14_13040
Enzymes [BR:
aprt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MUY14_13040
Transcription factors [BR:
aprt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MUY14_13040
DNA repair and recombination proteins [BR:
aprt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MUY14_13040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
UOX91499
LinkDB
All DBs
Position
3051494..3052957
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AA seq
487 aa
AA seq
DB search
MHEDFERCVRAVQAKDARFDGWFYTAVLTTKIYCRPSCPVVPPKPRNMSFYPSAAAAQQA
GFRACKRCRPDASPGSPLWNERADLVARAMRLIADGVVDTEGVRGLAARLGYSVRQVERQ
VFAELGAGPLALARAQRAQTARILIETTALPMTELALAAGFGSIRTFNDTVREVFALSPT
ELRQRAKGKPAAAGALVLRLPYRKPLYPDNLFGHLVATGVPGVEEWRDGAYRRTLRLPHG
PGVVALRPEDGHIAARLTLADLRDLPAATSRCRRLLDLDADPVAVDDQLATDPLLAPLVA
AAPGRRVPRTVDGAEFAVRAVLGQQVSTAAARTHAARLVVAHGEPVEDPEGGLTHLFPSP
EALASLDPETLAMPRSRRRTLLALVEALTGGLDLGAGSDWDATRAALTALPGFGPWTVES
IAMRALGDPDAFLPTDLGIKYAAAEVLGLGGQAAVVARSAAWRPWRAYATQHLWATGDHA
INRMPAA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgaagacttcgaacggtgcgtgcgggccgtgcaggcgaaggacgcccgcttcgac
gggtggttctacacggcggttctgacgacgaagatctactgccggcccagctgtcccgtc
gtgccgcccaagccgcggaacatgagcttctacccgagcgcggcggccgcccagcaggcc
gggttccgcgcctgcaagcgctgccgccccgacgccagccccggctcgccgctgtggaac
gagcgcgccgacctggtggcgcgggcgatgcggctgatcgccgacggcgttgtggacacc
gaaggcgtccgcgggctggccgcccggctcggctacagcgtccggcaggtcgagcgccag
gtgttcgccgagctcggcgccggcccgctggcgctggcgcgggcccagcgcgcgcagacc
gcgcggatcctgatcgagacgaccgccctgccgatgaccgagctggcgctggccgccggg
ttcggcagcatccggacgttcaacgacaccgtgcgcgaggtgttcgccctctcgccgacc
gagctgcggcagcgcgccaagggcaagcccgcggccgccggcgcgctcgtgctgcggctg
ccctaccggaagccgctgtacccggacaacctgttcgggcacctcgtggcgaccggtgtg
ccgggggtggaggagtggcgggacggcgcctaccgccggacgctgcggctgccgcacggc
cccggtgtcgtcgcgctgcggcccgaggacggccacatcgccgcccggctgaccctggcc
gacctccgcgacctgcctgccgcgacgagccgctgccgccgcctgctcgacctggacgcc
gacccggtcgccgtcgacgaccagctcgccaccgacccgctgctcgcgcccctggtggcg
gccgcaccgggccgccgggtcccgcgcacggtcgacggcgccgagttcgccgtccgggcc
gtgctgggccagcaggtctcgacggcggcggcccgcacccacgccgcccggctcgtcgtc
gcgcacggcgaaccggtcgaggaccccgaaggcggcctgacccacctgttcccgtcgccg
gaggcgctggcttcgctggacccggagacgctggccatgccccgcagccgccgtcgcacg
ctgctggcgctggtcgaggcgctgaccggcggcctcgacctcggcgcgggcagcgactgg
gacgcgacccgggccgcgctgaccgcgctgccggggttcgggccgtggacggtcgagagc
atcgcgatgcgggcgctcggcgacccggacgcgttcctccccaccgacctcggcatcaag
tacgcggcggctgaagtgctgggcctcggcggccaggccgccgtcgtcgcccggtccgcg
gcgtggcgcccctggcgggcgtacgccacccagcacctgtgggccaccggcgaccacgcg
atcaaccggatgcccgccgcctag
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