Amycolatopsis sp. FBCC-B4732: MUY14_25425
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Entry
MUY14_25425 CDS
T08335
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aprt
Amycolatopsis sp. FBCC-B4732
Pathway
aprt03030
DNA replication
aprt03430
Mismatch repair
aprt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aprt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUY14_25425
03430 Mismatch repair
MUY14_25425
03440 Homologous recombination
MUY14_25425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aprt03032
]
MUY14_25425
03400 DNA repair and recombination proteins [BR:
aprt03400
]
MUY14_25425
Enzymes [BR:
aprt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUY14_25425
DNA replication proteins [BR:
aprt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUY14_25425
DNA repair and recombination proteins [BR:
aprt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUY14_25425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
HAMP
Motif
Other DBs
NCBI-ProteinID:
UOX85140
LinkDB
All DBs
Position
5877299..5879002
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AA seq
567 aa
AA seq
DB search
MRSIQAQLAFDELGTPLRETTFVVFDLETTGAGPGASEITEIGAVKVRAGEVLGEFATLV
NPGKTIPPQIVSLTGITQLMVYDAPPIEEVLPAFLEFIGGSVLVAHNSGFDTSHMRAACE
AHGYVWPKLTVVCTARLARRVVPRDEVGRYNLTALALLFGARTRPTHRALDDARATVDVL
HGLLERVGNLGVHSLEELMGYLPEVTVAQRAKRHLAADLPAAPGVYLFKGPKEEVLYVGT
AKDLRRRVRTYFTGSENRSRIREMVALAERVDHVVCAHALEAEVRELRLIAAHRPAYNRR
SKNRHQGWWIGLTDEAFPRLSVVRLPRPGVLGPFRNQADARATADTLAGASGLRTCTQRI
SPRSPNGTPCVLAELGRCGAPCAGRQSVEAYEPLVASASGLIAGLDGRPLHTAAEHVERL
AAGEHYEQAARHRDELAALIRALGRAHRQGSLASIGELIAAGPDGAGGWELAVIRYGRLA
SAGVAPRGVPPMPVVEVLVASAETVLPEPGPLHGAPPEEVGVLLRWLARPGVRLVRTTRP
WAEPAAVAGWRGWLDLVTEAHSLEHVG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcgatccaggcacaactcgcgttcgacgagctcggaaccccgttgcgggaaacg
actttcgtggttttcgacctggaaaccacgggagccgggccgggcgcgtccgaaatcacc
gaaatcggcgcggtgaaggtgcgcgcgggtgaggtgctcggcgagttcgcgaccctggtc
aacccgggcaagaccatcccgccccagatcgtctcgctgacgggcatcacccagctgatg
gtgtacgacgccccgccgatcgaggaggtgctgccggcgttcctggagttcatcggcggc
tcggtgctggtggcgcacaactcgggcttcgacacctcgcacatgcgggccgcctgcgag
gcgcacgggtacgtgtggccgaagctgacggtggtgtgcaccgcgcggctggcccgccgg
gtcgtgccgcgcgacgaggtggggcgctacaacctgacggcgctggcgttgctgttcggc
gcccggacccgcccgacgcaccgcgcgctggacgacgccagggccacggtcgacgtcctg
cacggcctgctggagcgcgtcggcaacctgggcgtccactcgctcgaggagctgatgggc
tacctcccggaggtgacggtcgcccagcgcgcgaaacggcacctggcggcggacctgccg
gccgcgccgggggtctacctgttcaagggcccgaaggaggaggtcctgtacgtcggcacg
gcgaaggacctgcggcggcgggtgcggacgtacttcacgggttcggagaaccgcagccgg
atccgggagatggtcgcgctggccgagcgcgtcgaccacgtcgtgtgcgcgcacgcgctg
gaggcggaggtgcgcgagctgcggctgatcgcggcgcaccggcccgcgtacaaccgccgg
tcgaagaaccgccaccagggctggtggatcgggctgacggacgaggccttcccccgcctg
tcggtggtccgcctgccgcgcccgggcgtgctgggcccgttccgcaaccaggcggacgcc
cgcgcgacggcggacaccctggccggcgcgtccggcctgcgcacgtgcacgcagcggatc
tcaccccgctccccgaacggcaccccgtgcgtcctggccgagctgggccgctgcggcgcc
ccctgcgcgggacggcagagcgtcgaggcgtacgagccgttggtggcgtcggcgtccggc
ctgatcgcgggcctggacggccgccccctgcacaccgcggcggagcacgtggagcggctg
gcggccggtgagcactacgaacaggcggcccgccatcgcgacgagctggcggcgttgatc
agggcgctggggagggcgcaccggcagggatcgctggcctcgatcggcgagctgatcgcg
gcgggcccggacggcgcgggcggctgggaactggcggtgatccgctacggacgcctggcg
tcggcgggagtcgccccgcgaggggtgccgccgatgccggtcgtcgaggttctggtggct
tcggcggagacggtgctgccggaaccgggccccttgcacggcgcgccgccggaggaggtc
ggggtgttgctgcggtggctggctcgcccgggcgtccggttggtccggacgacgaggccg
tgggcggagccggcggcggtcgcggggtggcgggggtggctcgacctggtgacggaggcg
cattcactggagcacgtgggctga
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